RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 LYNP07948 512 aa13.69□□□□□ -0.22
PTPRU-208ENST00000493601 IER3P46695 156 aa13.69□□□□□ -0.22
PTPRU-208ENST00000493601 GUCA2AQ02747 115 aa13.69□□□□□ -0.22
PTPRU-208ENST00000493601 SRSF4Q08170 494 aaKnown RBP13.69□□□□□ -0.22
PTPRU-208ENST00000493601 IKZF1Q13422 519 aa13.69□□□□□ -0.22
PTPRU-208ENST00000493601 STUMQ69YW2 141 aa13.69□□□□□ -0.22
PTPRU-208ENST00000493601 GDPGP1Q6ZNW5 385 aa13.69□□□□□ -0.22
PTPRU-208ENST00000493601 PDZD9Q8IXQ8 264 aa13.69□□□□□ -0.22
PTPRU-208ENST00000493601 FGFRL1Q8N441 504 aa13.69□□□□□ -0.22
PTPRU-208ENST00000493601 OR10Z1Q8NGY1 313 aa13.69□□□□□ -0.22
PTPRU-208ENST00000493601 OTOSQ8NHW6 89 aa13.69□□□□□ -0.22
PTPRU-208ENST00000493601 NPRL2Q8WTW4 380 aa13.69□□□□□ -0.22
PTPRU-208ENST00000493601 LRTOMTQ8WZ04 291 aa13.69□□□□□ -0.22
PTPRU-208ENST00000493601 CCDC124Q96CT7 223 aaKnown RBP13.69□□□□□ -0.22
PTPRU-208ENST00000493601 ASB9Q96DX5 294 aa13.69□□□□□ -0.22
PTPRU-208ENST00000493601 NSL1Q96IY1 281 aa13.69□□□□□ -0.22
PTPRU-208ENST00000493601 DNTTIP1Q9H147 329 aa13.69□□□□□ -0.22
PTPRU-208ENST00000493601 OR51V1Q9H2C8 321 aa13.69□□□□□ -0.22
PTPRU-208ENST00000493601 HAO2Q9NYQ3 351 aa13.69□□□□□ -0.22
PTPRU-208ENST00000493601 PDP1Q9P0J1 537 aaPredicted RBP13.69□□□□□ -0.22
PTPRU-208ENST00000493601 ZNF319Q9P2F9 582 aa13.69□□□□□ -0.22
PTPRU-208ENST00000493601 DNAJB11Q9UBS4 358 aa13.69□□□□□ -0.22
PTPRU-208ENST00000493601 BTBD17A6NE02 478 aa13.68□□□□□ -0.22
PTPRU-208ENST00000493601 PRR23D1E9PI22 279 aaPredicted RBP13.68□□□□□ -0.22
PTPRU-208ENST00000493601 M0QZ24 198 aa13.68□□□□□ -0.22
PTPRU-208ENST00000493601 TIMM23O14925 209 aa13.68□□□□□ -0.22
PTPRU-208ENST00000493601 PRODHO43272 600 aa13.68□□□□□ -0.22
PTPRU-208ENST00000493601 CST1P01037 141 aa13.68□□□□□ -0.22
PTPRU-208ENST00000493601 PRR23D2P0DMB1 279 aaPredicted RBP13.68□□□□□ -0.22
PTPRU-208ENST00000493601 CALB2P22676 271 aa13.68□□□□□ -0.22
PTPRU-208ENST00000493601 PSMA6P60900 246 aaKnown RBP13.68□□□□□ -0.22
PTPRU-208ENST00000493601 ELF3P78545 371 aaPredicted RBP13.68□□□□□ -0.22
PTPRU-208ENST00000493601 MS4A2Q01362 244 aa13.68□□□□□ -0.22
PTPRU-208ENST00000493601 DEFA6Q01524 100 aa13.68□□□□□ -0.22
PTPRU-208ENST00000493601 PRDX4Q13162 271 aa13.68□□□□□ -0.22
PTPRU-208ENST00000493601 PDLIM3Q53GG5 364 aaPredicted RBP13.68□□□□□ -0.22
PTPRU-208ENST00000493601 ATPAF1Q5TC12 328 aaPredicted RBP13.68□□□□□ -0.22
PTPRU-208ENST00000493601 PLBD1Q6P4A8 553 aa13.68□□□□□ -0.22
PTPRU-208ENST00000493601 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
PTPRU-208ENST00000493601 SEH1LQ96EE3 360 aa13.68□□□□□ -0.22
PTPRU-208ENST00000493601 CCT8L2Q96SF2 557 aa13.68□□□□□ -0.22
PTPRU-208ENST00000493601 PKP2Q99959 881 aa13.68□□□□□ -0.22
PTPRU-208ENST00000493601 PPP1R3EQ9H7J1 279 aa13.68□□□□□ -0.22
PTPRU-208ENST00000493601 RNF114Q9Y508 228 aa13.68□□□□□ -0.22
PTPRU-208ENST00000493601 ZNF850A8MQ14 1090 aa13.67□□□□□ -0.22
PTPRU-208ENST00000493601 SELENOFO60613 162 aa13.67□□□□□ -0.22
PTPRU-208ENST00000493601 CST4P01036 141 aa13.67□□□□□ -0.22
PTPRU-208ENST00000493601 FBP1P09467 338 aa13.67□□□□□ -0.22
PTPRU-208ENST00000493601 EEF1B2P24534 225 aaKnown RBP13.67□□□□□ -0.22
PTPRU-208ENST00000493601 ACKR3P25106 362 aa13.67□□□□□ -0.22
PTPRU-208ENST00000493601 POU1F1P28069 291 aa13.67□□□□□ -0.22
PTPRU-208ENST00000493601 TGM4P49221 684 aa13.67□□□□□ -0.22
PTPRU-208ENST00000493601 GMFBP60983 142 aa13.67□□□□□ -0.22
PTPRU-208ENST00000493601 MIDNQ504T8 468 aa13.67□□□□□ -0.22
PTPRU-208ENST00000493601 KCTD8Q6ZWB6 473 aa13.67□□□□□ -0.22
PTPRU-208ENST00000493601 ZDHHC23Q8IYP9 409 aa13.67□□□□□ -0.22
PTPRU-208ENST00000493601 C8orf46Q8TAG6 207 aa13.67□□□□□ -0.22
PTPRU-208ENST00000493601 THEM6Q8WUY1 208 aa13.67□□□□□ -0.22
PTPRU-208ENST00000493601 OR5P3Q8WZ94 311 aa13.67□□□□□ -0.22
PTPRU-208ENST00000493601 H1FXQ92522 213 aaKnown RBP13.67□□□□□ -0.22
PTPRU-208ENST00000493601 RPL3LQ92901 407 aaKnown RBP13.67□□□□□ -0.22
PTPRU-208ENST00000493601 RAB3IPQ96QF0 476 aaPredicted RBP13.67□□□□□ -0.22
PTPRU-208ENST00000493601 DCTN5Q9BTE1 182 aa13.67□□□□□ -0.22
PTPRU-208ENST00000493601 CHID1Q9BWS9 393 aa13.67□□□□□ -0.22
PTPRU-208ENST00000493601 NIPAL2Q9H841 368 aa13.67□□□□□ -0.22
PTPRU-208ENST00000493601 SIRT7Q9NRC8 400 aa13.67□□□□□ -0.22
PTPRU-208ENST00000493601 TGP01266 2768 aa13.66□□□□□ -0.22
PTPRU-208ENST00000493601 GNGT2O14610 69 aa13.66□□□□□ -0.22
PTPRU-208ENST00000493601 HMGN1P05114 100 aa13.66□□□□□ -0.22
PTPRU-208ENST00000493601 HOXB6P17509 224 aaKnown RBP13.66□□□□□ -0.22
PTPRU-208ENST00000493601 GINS1Q14691 196 aa13.66□□□□□ -0.22
PTPRU-208ENST00000493601 PAPD5Q8NDF8 572 aaKnown RBP13.66□□□□□ -0.22
PTPRU-208ENST00000493601 OR5T2Q8NGG2 359 aa13.66□□□□□ -0.22
PTPRU-208ENST00000493601 LINC01006Q8NI28 216 aa13.66□□□□□ -0.22
PTPRU-208ENST00000493601 FAM81AQ8TBF8 368 aa13.66□□□□□ -0.22
PTPRU-208ENST00000493601 MED30Q96HR3 178 aa13.66□□□□□ -0.22
PTPRU-208ENST00000493601 WDR13Q9H1Z4 485 aa13.66□□□□□ -0.22
PTPRU-208ENST00000493601 MMP27Q9H306 513 aa13.66□□□□□ -0.22
PTPRU-208ENST00000493601 ZNF556Q9HAH1 456 aa13.66□□□□□ -0.22
PTPRU-208ENST00000493601 SNTG1Q9NSN8 517 aa13.66□□□□□ -0.22
PTPRU-208ENST00000493601 ZNRD1Q9P1U0 126 aa13.66□□□□□ -0.22
PTPRU-208ENST00000493601 SLC25A10Q9UBX3 287 aaPredicted RBP13.66□□□□□ -0.22
PTPRU-208ENST00000493601 VPREB3Q9UKI3 123 aa13.66□□□□□ -0.22
PTPRU-208ENST00000493601 NPFFO15130 113 aa13.65□□□□□ -0.22
PTPRU-208ENST00000493601 CLPXO76031 633 aa13.65□□□□□ -0.22
PTPRU-208ENST00000493601 SELLP14151 372 aa13.65□□□□□ -0.22
PTPRU-208ENST00000493601 FAM76BQ5HYJ3 339 aa13.65□□□□□ -0.22
PTPRU-208ENST00000493601 SLC35D3Q5M8T2 416 aa13.65□□□□□ -0.22
PTPRU-208ENST00000493601 NCR3LG1Q68D85 454 aa13.65□□□□□ -0.22
PTPRU-208ENST00000493601 DHRS7BQ6IAN0 325 aaPredicted RBP13.65□□□□□ -0.22
PTPRU-208ENST00000493601 ZNF788Q6ZQV5 615 aa13.65□□□□□ -0.22
PTPRU-208ENST00000493601 ADGRG5Q8IZF4 528 aa13.65□□□□□ -0.22
PTPRU-208ENST00000493601 OR8B12Q8NGG6 310 aa13.65□□□□□ -0.22
PTPRU-208ENST00000493601 HPSE2Q8WWQ2 592 aa13.65□□□□□ -0.22
PTPRU-208ENST00000493601 PIGCQ92535 297 aa13.65□□□□□ -0.22
PTPRU-208ENST00000493601 RNF170Q96K19 258 aa13.65□□□□□ -0.22
PTPRU-208ENST00000493601 LYZL4Q96KX0 146 aa13.65□□□□□ -0.22
PTPRU-208ENST00000493601 GAFA1Q96PS6 74 aa13.65□□□□□ -0.22
PTPRU-208ENST00000493601 HIST1H2AAQ96QV6 131 aa13.65□□□□□ -0.22
PTPRU-208ENST00000493601 TEX12Q9BXU0 123 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms