RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 FDX2Q6P4F2 183 aa13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 LRRC28Q86X40 367 aaPredicted RBP13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 EGFL6Q8IUX8 553 aa13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 SYS1Q8N2H4 156 aa13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 MUC20Q8N307 709 aaPredicted RBP13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 OR1M1Q8NGA1 313 aa13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 OR14K1Q8NGZ2 314 aa13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 OR2G2Q8NGZ5 317 aa13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 FBLIM1Q8WUP2 373 aa13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 HPSE2Q8WWQ2 592 aa13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 PELI1Q96FA3 418 aa13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 HIST1H2AAQ96QV6 131 aa13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 ZNF649Q9BS31 505 aa13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 JAM3Q9BX67 310 aa13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 C1orf123Q9NWV4 160 aa13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 KCNS2Q9ULS6 477 aa13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 PCDHB10Q9UN67 800 aa13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 PPIAL4EA0A075B759 164 aa13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 hCG_1807616A0A1W2PRN6 198 aa13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 TMEM210A6NLX4 147 aa13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 DHRS7CA6NNS2 312 aa13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 PPIAL4DF5H284 164 aa13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 SYT7O43581 403 aa13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 LMX1BO60663 402 aa13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 ZNF205O95201 554 aa13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 FSTL3O95633 263 aa13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 ATP6V1G2O95670 118 aa13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 PPIAL4FP0DN26 164 aa13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 DCKP27707 260 aa13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 THBS2P35442 1172 aa13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 RIPK1Q13546 671 aa13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 FAM201AQ5SY85 155 aa13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 ZNF826PQ6ZT77 177 aa13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 KCTD8Q6ZWB6 473 aa13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 KLHL36Q8N4N3 616 aa13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 CCDC54Q8NEL0 328 aa13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 RNF170Q96K19 258 aa13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 FGF23Q9GZV9 251 aaPredicted RBP13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 ISG20L2Q9H9L3 353 aaKnown RBP13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 FRRS1LQ9P0K9 344 aa13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 PPIAL4AQ9Y536 164 aa13.67□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 LOC107986453A0A1B0GWG9 222 aa13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 NRASP01111 189 aa13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 LIMS3P0CW19 117 aa13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 LIMS4P0CW20 117 aa13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 CCR9P51686 369 aa13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 NANOS3P60323 173 aaKnown RBP13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 CSNK2BP67870 215 aa13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 MRPL28Q13084 256 aaKnown RBP13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 CEACAM21Q3KPI0 293 aa13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 CEP78Q5JTW2 689 aa13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 CLVS2Q5SYC1 327 aa13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 TMEM244Q5VVB8 128 aa13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 PLCXD3Q63HM9 321 aa13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 LAIR2Q6ISS4 152 aa13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 MOB3CQ70IA8 216 aa13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 OR51F2Q8NH61 342 aa13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 TLNRD1Q9H1K6 362 aa13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 PLEKHA1Q9HB21 404 aa13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 PATZ1Q9HBE1 687 aaKnown RBP13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 LPAR2Q9HBW0 351 aa13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 TMEM160Q9NX00 188 aa13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 DIMT1Q9UNQ2 313 aaKnown RBP13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 EXOSC1Q9Y3B2 195 aaKnown RBP13.66□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 ZANQ9Y493 2812 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 EFCAB10A6NFE3 127 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 CEACAM18A8MTB9 384 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 F5H0A9 414 aaPredicted RBP13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 H3BSH0 61 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 MSMBP08118 114 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 PIPP12273 146 aaPredicted RBP13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 ZNF12P17014 697 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 MYL12AP19105 171 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 CD80P33681 288 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 ETV1P50549 477 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 GPM6AP51674 278 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 DVL1P1P54792 670 aaPredicted RBP13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 RIPPLY3P57055 190 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 GNG3P63215 75 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 MED21Q13503 144 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 ALKBH1Q13686 389 aaKnown RBP13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 ZNF404Q494X3 552 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 TMEM42Q69YG0 159 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 GLCCI1Q86VQ1 547 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 C11orf53Q8IXP5 236 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 BOLLQ8N9W6 283 aaKnown RBP13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 OR5A2Q8NGI9 324 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 HAVCR2Q8TDQ0 301 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 LRRC29Q8WV35 223 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 GGHQ92820 318 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 TMEM80Q96HE8 168 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 TMEM246Q9BRR3 403 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 TMEM165Q9HC07 324 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 GPR173Q9NS66 373 aa13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 CNOT2Q9NZN8 540 aaKnown RBP13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 CAB39Q9Y376 341 aaPredicted RBP13.65□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 ABCA1O95477 2261 aa13.64□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 A6NIN4 97 aa13.64□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 OR5B21A6NL26 309 aa13.64□□□□□ -0.23
MSH5-SAPCD1-206ENST00000491552 ZNF732B4DXR9 585 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms