RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 GPR137BO60478 399 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 IGHV4-59P01825 116 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 T-ENOLP0DO92 83 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 SELLP14151 372 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 AMY2BP19961 511 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 ACKR3P25106 362 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 IL5RAQ01344 420 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 IKZF1Q13422 519 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 GINS1Q14691 196 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 CDONQ4KMG0 1287 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 OLFML2AQ68BL7 652 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 STUMQ69YW2 141 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 C17orf107Q6ZR85 190 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 LDLRAD3Q86YD5 345 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 ZNF454Q8N9F8 522 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 CCDC197Q8NCU1 140 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 LY6G5BQ8NDX9 201 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 TBC1D15Q8TC07 691 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 THEM6Q8WUY1 208 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 RPL3LQ92901 407 aaKnown RBP11.24□□□□□ -0.61
COL6A3-211ENST00000491233 C12orf43Q96C57 262 aaKnown RBP11.24□□□□□ -0.61
COL6A3-211ENST00000491233 PKP2Q99959 881 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 FGF23Q9GZV9 251 aaPredicted RBP11.24□□□□□ -0.61
COL6A3-211ENST00000491233 CNTD2Q9H8S5 307 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 SIRT7Q9NRC8 400 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 SNTG1Q9NSN8 517 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 MPC1Q9Y5U8 109 aa11.24□□□□□ -0.61
COL6A3-211ENST00000491233 CLPSL1A2RUU4 121 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 TMEM210A6NLX4 147 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 PRODHO43272 600 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 NDUFB3O43676 98 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 E2F6O75461 281 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 RPL15P61313 204 aaKnown RBP11.23□□□□□ -0.61
COL6A3-211ENST00000491233 RPS7P62081 194 aaKnown RBP11.23□□□□□ -0.61
COL6A3-211ENST00000491233 PRB3Q04118 309 aaPredicted RBP11.23□□□□□ -0.61
COL6A3-211ENST00000491233 BRICD5Q6PL45 260 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 KCTD8Q6ZWB6 473 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 CPOQ8IVL8 374 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 HS3ST5Q8IZT8 346 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 BBS1Q8NFJ9 593 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 OR5T2Q8NGG2 359 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 OR8B12Q8NGG6 310 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 OR10Z1Q8NGY1 313 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 CANT1Q8WVQ1 401 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 HPSE2Q8WWQ2 592 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 OR5P3Q8WZ94 311 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 H1FXQ92522 213 aaKnown RBP11.23□□□□□ -0.61
COL6A3-211ENST00000491233 PIGCQ92535 297 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 DYRK2Q92630 601 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 LYZL4Q96KX0 146 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 WDR13Q9H1Z4 485 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 SEMA6AQ9H2E6 1030 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 ABCB9Q9NP78 766 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 HAO2Q9NYQ3 351 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 DNAJB11Q9UBS4 358 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 LRP12Q9Y561 859 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 MEGF8Q7Z7M0 2845 aa11.23□□□□□ -0.61
COL6A3-211ENST00000491233 AQP12BA6NM10 295 aa11.22□□□□□ -0.61
COL6A3-211ENST00000491233 FAM107AO95990 144 aa11.22□□□□□ -0.61
COL6A3-211ENST00000491233 CST4P01036 141 aa11.22□□□□□ -0.61
COL6A3-211ENST00000491233 TFF1P04155 84 aa11.22□□□□□ -0.61
COL6A3-211ENST00000491233 HMGN1P05114 100 aa11.22□□□□□ -0.61
COL6A3-211ENST00000491233 OSMP13725 252 aa11.22□□□□□ -0.61
COL6A3-211ENST00000491233 SLC2A5P22732 501 aa11.22□□□□□ -0.61
COL6A3-211ENST00000491233 IER3P46695 156 aa11.22□□□□□ -0.61
COL6A3-211ENST00000491233 TGM4P49221 684 aa11.22□□□□□ -0.61
COL6A3-211ENST00000491233 DLX1P56177 255 aa11.22□□□□□ -0.61
COL6A3-211ENST00000491233 KLRD1Q13241 179 aa11.22□□□□□ -0.61
COL6A3-211ENST00000491233 LRRC10Q5BKY1 277 aa11.22□□□□□ -0.61
COL6A3-211ENST00000491233 AQP12AQ8IXF9 295 aa11.22□□□□□ -0.61
COL6A3-211ENST00000491233 ZDHHC23Q8IYP9 409 aa11.22□□□□□ -0.61
COL6A3-211ENST00000491233 CMTM4Q8IZR5 234 aa11.22□□□□□ -0.61
COL6A3-211ENST00000491233 RNF170Q96K19 258 aa11.22□□□□□ -0.61
COL6A3-211ENST00000491233 GAFA1Q96PS6 74 aa11.22□□□□□ -0.61
COL6A3-211ENST00000491233 RAB3IPQ96QF0 476 aaPredicted RBP11.22□□□□□ -0.61
COL6A3-211ENST00000491233 DCTN5Q9BTE1 182 aa11.22□□□□□ -0.61
COL6A3-211ENST00000491233 THTPAQ9BU02 230 aa11.22□□□□□ -0.61
COL6A3-211ENST00000491233 NIPAL2Q9H841 368 aa11.22□□□□□ -0.61
COL6A3-211ENST00000491233 ZNF556Q9HAH1 456 aa11.22□□□□□ -0.61
COL6A3-211ENST00000491233 PKD1L1Q8TDX9 2849 aa11.22□□□□□ -0.61
COL6A3-211ENST00000491233 A0A1W2PRD5 423 aa11.21□□□□□ -0.61
COL6A3-211ENST00000491233 A0A1W2PRF3 423 aa11.21□□□□□ -0.61
COL6A3-211ENST00000491233 A0A1W2PRM7 423 aa11.21□□□□□ -0.61
COL6A3-211ENST00000491233 RNASEK-C17orf49H0YIS7 233 aa11.21□□□□□ -0.61
COL6A3-211ENST00000491233 GPR37O15354 613 aa11.21□□□□□ -0.61
COL6A3-211ENST00000491233 AKR7A2O43488 359 aa11.21□□□□□ -0.61
COL6A3-211ENST00000491233 CDK5Q00535 292 aa11.21□□□□□ -0.61
COL6A3-211ENST00000491233 DGUOKQ16854 277 aa11.21□□□□□ -0.61
COL6A3-211ENST00000491233 SLC35D3Q5M8T2 416 aa11.21□□□□□ -0.61
COL6A3-211ENST00000491233 ATPAF1Q5TC12 328 aaPredicted RBP11.21□□□□□ -0.61
COL6A3-211ENST00000491233 TMEM236Q5W0B7 351 aa11.21□□□□□ -0.61
COL6A3-211ENST00000491233 METAP1DQ6UB28 335 aaPredicted RBP11.21□□□□□ -0.61
COL6A3-211ENST00000491233 ZNF788Q6ZQV5 615 aa11.21□□□□□ -0.61
COL6A3-211ENST00000491233 KRT77Q7Z794 578 aa11.21□□□□□ -0.61
COL6A3-211ENST00000491233 C8orf46Q8TAG6 207 aa11.21□□□□□ -0.61
COL6A3-211ENST00000491233 FAM81AQ8TBF8 368 aa11.21□□□□□ -0.61
COL6A3-211ENST00000491233 CITED1Q99966 193 aa11.21□□□□□ -0.61
COL6A3-211ENST00000491233 DNTTIP1Q9H147 329 aa11.21□□□□□ -0.61
COL6A3-211ENST00000491233 C1orf21Q9H246 121 aa11.21□□□□□ -0.61
COL6A3-211ENST00000491233 SLC25A19Q9HC21 320 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms