RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 SNCBQ16143 134 aa14.89□□□□□ -0.03
HMGN1-219ENST00000491183 MICBQ29980 383 aa14.89□□□□□ -0.03
HMGN1-219ENST00000491183 FAM76BQ5HYJ3 339 aa14.89□□□□□ -0.03
HMGN1-219ENST00000491183 WDR38Q5JTN6 314 aa14.89□□□□□ -0.03
HMGN1-219ENST00000491183 RUSC1-AS1Q66K80 236 aa14.89□□□□□ -0.03
HMGN1-219ENST00000491183 BCDIN3DQ7Z5W3 292 aaKnown RBP14.89□□□□□ -0.03
HMGN1-219ENST00000491183 TAF15Q92804 592 aaKnown RBP eCLIP14.89□□□□□ -0.03
HMGN1-219ENST00000491183 RPL3LQ92901 407 aaKnown RBP14.89□□□□□ -0.03
HMGN1-219ENST00000491183 RTL8AQ9BWD3 113 aa14.89□□□□□ -0.03
HMGN1-219ENST00000491183 SIRPDQ9H106 197 aa14.89□□□□□ -0.03
HMGN1-219ENST00000491183 FAM206AQ9NX38 181 aa14.89□□□□□ -0.03
HMGN1-219ENST00000491183 KIF17Q9P2E2 1029 aa14.89□□□□□ -0.03
HMGN1-219ENST00000491183 COPS3Q9UNS2 423 aa14.89□□□□□ -0.03
HMGN1-219ENST00000491183 CENPVL3A0A0U1RRI6 287 aa14.88□□□□□ -0.03
HMGN1-219ENST00000491183 SRRM5B3KS81 715 aa14.88□□□□□ -0.03
HMGN1-219ENST00000491183 M0R129 80 aa14.88□□□□□ -0.03
HMGN1-219ENST00000491183 P2RY10O00398 339 aa14.88□□□□□ -0.03
HMGN1-219ENST00000491183 EPHA2P29317 976 aa14.88□□□□□ -0.03
HMGN1-219ENST00000491183 BPIFB3P59826 476 aa14.88□□□□□ -0.03
HMGN1-219ENST00000491183 ESRRGP62508 458 aa14.88□□□□□ -0.03
HMGN1-219ENST00000491183 GPR157Q5UAW9 335 aa14.88□□□□□ -0.03
HMGN1-219ENST00000491183 DEGS2Q6QHC5 323 aa14.88□□□□□ -0.03
HMGN1-219ENST00000491183 KRT74Q7RTS7 529 aa14.88□□□□□ -0.03
HMGN1-219ENST00000491183 FTMTQ8N4E7 242 aa14.88□□□□□ -0.03
HMGN1-219ENST00000491183 PNLDC1Q8NA58 520 aaKnown RBP14.88□□□□□ -0.03
HMGN1-219ENST00000491183 OR5T2Q8NGG2 359 aa14.88□□□□□ -0.03
HMGN1-219ENST00000491183 HPSE2Q8WWQ2 592 aa14.88□□□□□ -0.03
HMGN1-219ENST00000491183 PPP1R14AQ96A00 147 aa14.88□□□□□ -0.03
HMGN1-219ENST00000491183 SLC25A28Q96A46 364 aa14.88□□□□□ -0.03
HMGN1-219ENST00000491183 RNF170Q96K19 258 aa14.88□□□□□ -0.03
HMGN1-219ENST00000491183 PKP2Q99959 881 aa14.88□□□□□ -0.03
HMGN1-219ENST00000491183 WDR13Q9H1Z4 485 aa14.88□□□□□ -0.03
HMGN1-219ENST00000491183 ZNF391Q9UJN7 358 aa14.88□□□□□ -0.03
HMGN1-219ENST00000491183 PCDHGB1Q9Y5G3 927 aa14.88□□□□□ -0.03
HMGN1-219ENST00000491183 NBEAL1Q6ZS30 2694 aa14.88□□□□□ -0.03
HMGN1-219ENST00000491183 TMEM269A0A1B0GVZ9 245 aa14.87□□□□□ -0.03
HMGN1-219ENST00000491183 ACOD1A6NK06 481 aa14.87□□□□□ -0.03
HMGN1-219ENST00000491183 HOXA3O43365 443 aaPredicted RBP14.87□□□□□ -0.03
HMGN1-219ENST00000491183 ECDO95905 644 aaPredicted RBP14.87□□□□□ -0.03
HMGN1-219ENST00000491183 DCTDP32321 178 aa14.87□□□□□ -0.03
HMGN1-219ENST00000491183 TGM4P49221 684 aa14.87□□□□□ -0.03
HMGN1-219ENST00000491183 ARF6P62330 175 aa14.87□□□□□ -0.03
HMGN1-219ENST00000491183 ROM1Q03395 351 aa14.87□□□□□ -0.03
HMGN1-219ENST00000491183 ATP6AP1Q15904 470 aa14.87□□□□□ -0.03
HMGN1-219ENST00000491183 C11orf91Q3C1V1 193 aa14.87□□□□□ -0.03
HMGN1-219ENST00000491183 ATPAF1Q5TC12 328 aaPredicted RBP14.87□□□□□ -0.03
HMGN1-219ENST00000491183 KCTD18Q6PI47 426 aaPredicted RBP14.87□□□□□ -0.03
HMGN1-219ENST00000491183 FAM216BQ8N7L0 139 aa14.87□□□□□ -0.03
HMGN1-219ENST00000491183 SCCPDHQ8NBX0 429 aa14.87□□□□□ -0.03
HMGN1-219ENST00000491183 OR10Z1Q8NGY1 313 aa14.87□□□□□ -0.03
HMGN1-219ENST00000491183 ST8SIA4Q92187 359 aa14.87□□□□□ -0.03
HMGN1-219ENST00000491183 OR8B4Q96RC9 309 aa14.87□□□□□ -0.03
HMGN1-219ENST00000491183 ZNF747Q9BV97 191 aa14.87□□□□□ -0.03
HMGN1-219ENST00000491183 CNTD2Q9H8S5 307 aa14.87□□□□□ -0.03
HMGN1-219ENST00000491183 HAO2Q9NYQ3 351 aa14.87□□□□□ -0.03
HMGN1-219ENST00000491183 RPUSD1Q9UJJ7 312 aaKnown RBP14.87□□□□□ -0.03
HMGN1-219ENST00000491183 A0A0U1RQV5 110 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 TMEM210A6NLX4 147 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 ZAR1LA6NP61 321 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 G3V2T6 193 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 ZNF254O75437 659 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 IGLV3-1P01715 115 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 TFF1P04155 84 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 MAP2K3P46734 347 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 GMFBP60983 142 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 LCN1P1Q5VSP4 162 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 AADACL4Q5VUY2 407 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 METTL11BQ5VVY1 283 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 SLX4IPQ5VYV7 408 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 STUMQ69YW2 141 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 KDM4DQ6B0I6 523 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 C16orf87Q6PH81 154 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 KCTD8Q6ZWB6 473 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 MEPCEQ7L2J0 689 aaKnown RBP14.86□□□□□ -0.03
HMGN1-219ENST00000491183 ZDHHC23Q8IYP9 409 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 ZNF679Q8IYX0 411 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 LY6G5BQ8NDX9 201 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 ZDHHC16Q969W1 377 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 C12orf43Q96C57 262 aaKnown RBP14.86□□□□□ -0.03
HMGN1-219ENST00000491183 MROQ9BYG7 248 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 TTTY10Q9BZA0 68 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 PBOV1Q9GZY1 135 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 ABCB9Q9NP78 766 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 KRT84Q9NSB2 600 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 SNTG1Q9NSN8 517 aa14.86□□□□□ -0.03
HMGN1-219ENST00000491183 ZNF816-ZNF321PA0A0X1KG74 233 aa14.85□□□□□ -0.03
HMGN1-219ENST00000491183 AKR7A2O43488 359 aa14.85□□□□□ -0.03
HMGN1-219ENST00000491183 SRSF10O75494 262 aaKnown RBP14.85□□□□□ -0.03
HMGN1-219ENST00000491183 PDCD1Q15116 288 aa14.85□□□□□ -0.03
HMGN1-219ENST00000491183 DMRTC1Q5HYR2 192 aa14.85□□□□□ -0.03
HMGN1-219ENST00000491183 C12orf73Q69YU5 71 aa14.85□□□□□ -0.03
HMGN1-219ENST00000491183 Q6YL49 198 aa14.85□□□□□ -0.03
HMGN1-219ENST00000491183 SLC36A1Q7Z2H8 476 aa14.85□□□□□ -0.03
HMGN1-219ENST00000491183 AMIGO2Q86SJ2 522 aa14.85□□□□□ -0.03
HMGN1-219ENST00000491183 TCEANCQ8N8B7 351 aa14.85□□□□□ -0.03
HMGN1-219ENST00000491183 ASB17Q8WXJ9 295 aa14.85□□□□□ -0.03
HMGN1-219ENST00000491183 LHX4Q969G2 390 aa14.85□□□□□ -0.03
HMGN1-219ENST00000491183 DUS3LQ96G46 650 aaKnown RBP14.85□□□□□ -0.03
HMGN1-219ENST00000491183 RAB3IPQ96QF0 476 aaPredicted RBP14.85□□□□□ -0.03
HMGN1-219ENST00000491183 AP4S1Q9Y587 144 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms