RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 ZNF611Q8N823 705 aa11.32□□□□□ -0.6
SNX12-205ENST00000490561 BHLHE23Q8NDY6 225 aa11.32□□□□□ -0.6
SNX12-205ENST00000490561 DNAAF1Q8NEP3 725 aa11.32□□□□□ -0.6
SNX12-205ENST00000490561 OR5A2Q8NGI9 324 aa11.32□□□□□ -0.6
SNX12-205ENST00000490561 OR13C9Q8NGT0 318 aa11.32□□□□□ -0.6
SNX12-205ENST00000490561 OR8S1Q8NH09 359 aa11.32□□□□□ -0.6
SNX12-205ENST00000490561 FOXRED1Q96CU9 486 aaPredicted RBP11.32□□□□□ -0.6
SNX12-205ENST00000490561 TRMT61AQ96FX7 289 aaKnown RBP11.32□□□□□ -0.6
SNX12-205ENST00000490561 CENPOQ9BU64 300 aa11.32□□□□□ -0.6
SNX12-205ENST00000490561 ADAT1Q9BUB4 502 aaKnown RBP11.32□□□□□ -0.6
SNX12-205ENST00000490561 RTL8AQ9BWD3 113 aa11.32□□□□□ -0.6
SNX12-205ENST00000490561 TMEM138Q9NPI0 162 aa11.32□□□□□ -0.6
SNX12-205ENST00000490561 C14orf119Q9NWQ9 140 aa11.32□□□□□ -0.6
SNX12-205ENST00000490561 ZDHHC8Q9ULC8 765 aa11.32□□□□□ -0.6
SNX12-205ENST00000490561 SPTBN1Q01082 2364 aaKnown RBP11.32□□□□□ -0.6
SNX12-205ENST00000490561 A0A1W2PPK0 400 aa11.31□□□□□ -0.6
SNX12-205ENST00000490561 M0R233 179 aa11.31□□□□□ -0.6
SNX12-205ENST00000490561 IL1AP01583 271 aa11.31□□□□□ -0.6
SNX12-205ENST00000490561 ADH4P08319 380 aa11.31□□□□□ -0.6
SNX12-205ENST00000490561 CA6P23280 308 aa11.31□□□□□ -0.6
SNX12-205ENST00000490561 FUT6P51993 359 aa11.31□□□□□ -0.6
SNX12-205ENST00000490561 LSM3P62310 102 aaKnown RBP11.31□□□□□ -0.6
SNX12-205ENST00000490561 OR8G1Q15617 311 aa11.31□□□□□ -0.6
SNX12-205ENST00000490561 MSMPQ1L6U9 139 aa11.31□□□□□ -0.6
SNX12-205ENST00000490561 CEACAM21Q3KPI0 293 aa11.31□□□□□ -0.6
SNX12-205ENST00000490561 FAM209AQ5JX71 171 aa11.31□□□□□ -0.6
SNX12-205ENST00000490561 FAM27D1Q5T7N8 215 aa11.31□□□□□ -0.6
SNX12-205ENST00000490561 GLT8D1Q68CQ7 371 aa11.31□□□□□ -0.6
SNX12-205ENST00000490561 C20orf204Q6ZNR8 217 aa11.31□□□□□ -0.6
SNX12-205ENST00000490561 MOB3CQ70IA8 216 aa11.31□□□□□ -0.6
SNX12-205ENST00000490561 LRP11Q86VZ4 500 aa11.31□□□□□ -0.6
SNX12-205ENST00000490561 CROCCP3Q8IVE0 287 aa11.31□□□□□ -0.6
SNX12-205ENST00000490561 NEUROG1Q92886 237 aa11.31□□□□□ -0.6
SNX12-205ENST00000490561 NAA50Q9GZZ1 169 aaKnown RBP11.31□□□□□ -0.6
SNX12-205ENST00000490561 MS4A5Q9H3V2 200 aa11.31□□□□□ -0.6
SNX12-205ENST00000490561 HEATR1Q9H583 2144 aaKnown RBP11.31□□□□□ -0.6
SNX12-205ENST00000490561 GPR173Q9NS66 373 aa11.31□□□□□ -0.6
SNX12-205ENST00000490561 CBLN4Q9NTU7 201 aa11.31□□□□□ -0.6
SNX12-205ENST00000490561 PLEKHB1Q9UF11 243 aaPredicted RBP11.31□□□□□ -0.6
SNX12-205ENST00000490561 BAHCC1Q9P281 2608 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 A6NIN4 97 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 TMEM210A6NLX4 147 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 H3BMQ9 156 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 HCKP08631 526 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 PRF1P14222 555 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 RAB3BP20337 219 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 AZGP1P25311 298 aaKnown RBP11.3□□□□□ -0.6
SNX12-205ENST00000490561 SSTR2P30874 369 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 SERPINB10P48595 397 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 PPOXP50336 477 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 ZNF81P51508 661 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 MMP15P51511 669 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 ATP1B3P54709 279 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 PRSS12P56730 875 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 VBP1P61758 197 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 NCS1P62166 190 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 GNG3P63215 75 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 UBE2V2Q15819 145 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 SWI5Q1ZZU3 235 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 PCGF3Q3KNV8 242 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 ALKBH6Q3KRA9 238 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 LRRTM1Q86UE6 522 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 DTX2Q86UW9 622 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 CELF2-AS1Q8N7Q2 184 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 OR5P3Q8WZ94 311 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 C12orf43Q96C57 262 aaKnown RBP11.3□□□□□ -0.6
SNX12-205ENST00000490561 ITPKCQ96DU7 683 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 BORCS8Q96FH0 119 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 DCSTAMPQ9H295 470 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 CXXC4Q9H2H0 198 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 PPIL3Q9H2H8 161 aaKnown RBP11.3□□□□□ -0.6
SNX12-205ENST00000490561 CLEC4MQ9H2X3 399 aaPredicted RBP11.3□□□□□ -0.6
SNX12-205ENST00000490561 DYNLRB1Q9NP97 96 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 MYEF2Q9P2K5 600 aaKnown RBP11.3□□□□□ -0.6
SNX12-205ENST00000490561 PMF1-BGLAPU3KQ54 211 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 PRR14LQ5THK1 2151 aa11.3□□□□□ -0.6
SNX12-205ENST00000490561 USP9XQ93008 2570 aaPredicted RBP11.29□□□□□ -0.6
SNX12-205ENST00000490561 TRAV8-7A0A075B6U6 113 aa11.29□□□□□ -0.6
SNX12-205ENST00000490561 CDRT1O95170 752 aa11.29□□□□□ -0.6
SNX12-205ENST00000490561 MAS1P04201 325 aa11.29□□□□□ -0.6
SNX12-205ENST00000490561 SDC2P34741 201 aa11.29□□□□□ -0.6
SNX12-205ENST00000490561 CD200P41217 278 aa11.29□□□□□ -0.6
SNX12-205ENST00000490561 SRP9P49458 86 aaKnown RBP11.29□□□□□ -0.6
SNX12-205ENST00000490561 RBP2P50120 134 aa11.29□□□□□ -0.6
SNX12-205ENST00000490561 CAPZA1P52907 286 aa11.29□□□□□ -0.6
SNX12-205ENST00000490561 DDI2Q5TDH0 399 aa11.29□□□□□ -0.6
SNX12-205ENST00000490561 ASPHD2Q6ICH7 369 aa11.29□□□□□ -0.6
SNX12-205ENST00000490561 ZNF573Q86YE8 665 aa11.29□□□□□ -0.6
SNX12-205ENST00000490561 PNLDC1Q8NA58 520 aaKnown RBP11.29□□□□□ -0.6
SNX12-205ENST00000490561 UQCC2Q9BRT2 126 aa11.29□□□□□ -0.6
SNX12-205ENST00000490561 METTL17Q9H7H0 456 aaPredicted RBP11.29□□□□□ -0.6
SNX12-205ENST00000490561 UBTD1Q9HAC8 227 aa11.29□□□□□ -0.6
SNX12-205ENST00000490561 RTTNQ86VV8 2226 aa11.29□□□□□ -0.6
SNX12-205ENST00000490561 IGKV1-9A0A0C4DH69 117 aa11.28□□□□□ -0.6
SNX12-205ENST00000490561 TRIM64BA6NI03 449 aa11.28□□□□□ -0.6
SNX12-205ENST00000490561 NOTOA8MTQ0 251 aa11.28□□□□□ -0.6
SNX12-205ENST00000490561 C17orf100A8MU93 164 aa11.28□□□□□ -0.6
SNX12-205ENST00000490561 LILRA1O75019 489 aa11.28□□□□□ -0.6
SNX12-205ENST00000490561 CD55P08174 381 aa11.28□□□□□ -0.6
SNX12-205ENST00000490561 DANCRP0C864 163 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms