RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 LYPD6Q86Y78 171 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 EGFL6Q8IUX8 553 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 FOXRED2Q8IWF2 684 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 CYB561A3Q8NBI2 242 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 OR11H1Q8NG94 326 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 OR2AJ1Q8NGZ0 328 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 TMEM255BQ8WV15 326 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 TMEM239Q8WW34 195 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 LIPHQ8WWY8 451 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 SPTSSAQ969W0 71 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 PRSS27Q9BQR3 290 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 TUBA4BQ9H853 241 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 C19orf73Q9NVV2 129 aa9.02□□□□□ -0.97
HDAC6-233ENST00000489352 VSX1Q9NZR4 365 aaPredicted RBP9.02□□□□□ -0.97
HDAC6-233ENST00000489352 NUPR2A6NF83 97 aa9.01□□□□□ -0.97
HDAC6-233ENST00000489352 A8MZ25 164 aa9.01□□□□□ -0.97
HDAC6-233ENST00000489352 SLC1A7O00341 560 aa9.01□□□□□ -0.97
HDAC6-233ENST00000489352 SLC22A2O15244 555 aa9.01□□□□□ -0.97
HDAC6-233ENST00000489352 RIPK2O43353 540 aa9.01□□□□□ -0.97
HDAC6-233ENST00000489352 PSPNO60542 156 aa9.01□□□□□ -0.97
HDAC6-233ENST00000489352 HTR1DP28221 377 aa9.01□□□□□ -0.97
HDAC6-233ENST00000489352 MDH1P40925 334 aaKnown RBP9.01□□□□□ -0.97
HDAC6-233ENST00000489352 HIST1H3AP68431 136 aa9.01□□□□□ -0.97
HDAC6-233ENST00000489352 MXRA7P84157 204 aa9.01□□□□□ -0.97
HDAC6-233ENST00000489352 HIST2H3PS2Q5TEC6 136 aa9.01□□□□□ -0.97
HDAC6-233ENST00000489352 LCN8Q6JVE9 175 aa9.01□□□□□ -0.97
HDAC6-233ENST00000489352 KCTD8Q6ZWB6 473 aa9.01□□□□□ -0.97
HDAC6-233ENST00000489352 HIST2H3AQ71DI3 136 aa9.01□□□□□ -0.97
HDAC6-233ENST00000489352 TRMT10CQ7L0Y3 403 aaKnown RBP9.01□□□□□ -0.97
HDAC6-233ENST00000489352 RBM45Q8IUH3 476 aaKnown RBP9.01□□□□□ -0.97
HDAC6-233ENST00000489352 OR51A7Q8NH64 312 aa9.01□□□□□ -0.97
HDAC6-233ENST00000489352 MICU1Q9BPX6 476 aa9.01□□□□□ -0.97
HDAC6-233ENST00000489352 GON7Q9BXV9 100 aa9.01□□□□□ -0.97
HDAC6-233ENST00000489352 OPA3Q9H6K4 179 aa9.01□□□□□ -0.97
HDAC6-233ENST00000489352 TBC1D23Q9NUY8 699 aa9.01□□□□□ -0.97
HDAC6-233ENST00000489352 AIG1Q9NVV5 245 aa9.01□□□□□ -0.97
HDAC6-233ENST00000489352 N6AMT1Q9Y5N5 214 aa9.01□□□□□ -0.97
HDAC6-233ENST00000489352 PRSS37A4D1T9 235 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 ANXA2P2A6NMY6 339 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 M0R135 149 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 DNAJC8O75937 253 aaPredicted RBP9□□□□□ -0.97
HDAC6-233ENST00000489352 PSG2P11465 335 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 PIPP12273 146 aaPredicted RBP9□□□□□ -0.97
HDAC6-233ENST00000489352 TAS2R41P59536 307 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 ACTA2P62736 377 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 ACTG2P63267 376 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 ACTC1P68032 377 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 ACTA1P68133 377 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 PMS2P11Q13670 270 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 KRT72Q14CN4 511 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 MEP1BQ16820 701 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 DUSP7Q16829 419 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 PNLIPRP3Q17RR3 467 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 GLYATL3Q5SZD4 288 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 AGBL2Q5U5Z8 902 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 ACP7Q6ZNF0 438 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 NKAIN4Q8IVV8 208 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 SLC26A7Q8TE54 656 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 C4orf3Q8WVX3 66 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 RPL3LQ92901 407 aaKnown RBP9□□□□□ -0.97
HDAC6-233ENST00000489352 ZNF799Q96GE5 643 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 FAM110AQ9BQ89 295 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 RTL8AQ9BWD3 113 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 YY1AP1Q9H869 796 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 MOB4Q9Y3A3 225 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 LHFPL6Q9Y693 200 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 HSPE1-MOB4S4R3N1 261 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 HERC1Q15751 4861 aa9□□□□□ -0.97
HDAC6-233ENST00000489352 IGKV1D-17A0A075B6S4 117 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 SMIM23A6NLE4 172 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 C17orf98A8MV24 154 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 OVOL1O14753 267 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 ARSBP15848 533 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 FHL3Q13643 280 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 ZNF273Q14593 569 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 KCNMB1Q16558 191 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 RFX4Q33E94 735 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 SNAI3Q3KNW1 292 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 KRTAP27-1Q3LI81 207 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 OGFOD2Q6N063 350 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 ZBTB49Q6ZSB9 765 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 MSANTD1Q6ZTZ1 278 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 THAP5Q7Z6K1 395 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 SLC35E3Q7Z769 313 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 OAFQ86UD1 273 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 MICU2Q8IYU8 434 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 OR6V1Q8N148 313 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 STPG2Q8N412 459 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 ZNF781Q8N8C0 355 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 BPIFA2Q96DR5 249 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 ZNF570Q96NI8 536 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 NDEL1Q9GZM8 345 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 NSRP1Q9H0G5 558 aaKnown RBP8.99□□□□□ -0.97
HDAC6-233ENST00000489352 TLNRD1Q9H1K6 362 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 SYT4Q9H2B2 425 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 RETNQ9HD89 108 aa8.99□□□□□ -0.97
HDAC6-233ENST00000489352 KLK5Q9Y337 293 aaPredicted RBP8.99□□□□□ -0.97
HDAC6-233ENST00000489352 TRAV27A0A087WT01 109 aa8.98□□□□□ -0.97
HDAC6-233ENST00000489352 OR5F1O95221 314 aa8.98□□□□□ -0.97
HDAC6-233ENST00000489352 RBP4P02753 201 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms