RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 METAP1DQ6UB28 335 aaPredicted RBP8.62□□□□□ -1.03
USP11-211ENST00000489111 BAIAP2L2Q6UXY1 529 aa8.62□□□□□ -1.03
USP11-211ENST00000489111 LHFPL2Q6ZUX7 228 aa8.62□□□□□ -1.03
USP11-211ENST00000489111 OR4M1Q8NGD0 313 aa8.62□□□□□ -1.03
USP11-211ENST00000489111 OR51D1Q8NGF3 324 aa8.62□□□□□ -1.03
USP11-211ENST00000489111 LILRB4Q8NHJ6 448 aa8.62□□□□□ -1.03
USP11-211ENST00000489111 SYNPRQ8TBG9 265 aa8.62□□□□□ -1.03
USP11-211ENST00000489111 TNFAIP8L1Q8WVP5 186 aa8.62□□□□□ -1.03
USP11-211ENST00000489111 RAB40AQ8WXH6 277 aa8.62□□□□□ -1.03
USP11-211ENST00000489111 PHF21AQ96BD5 680 aa8.62□□□□□ -1.03
USP11-211ENST00000489111 CMBLQ96DG6 245 aa8.62□□□□□ -1.03
USP11-211ENST00000489111 BORCS8Q96FH0 119 aa8.62□□□□□ -1.03
USP11-211ENST00000489111 RADILQ96JH8 1075 aa8.62□□□□□ -1.03
USP11-211ENST00000489111 CMTM3Q96MX0 182 aa8.62□□□□□ -1.03
USP11-211ENST00000489111 S100A13Q99584 98 aa8.62□□□□□ -1.03
USP11-211ENST00000489111 PALMDQ9NP74 551 aa8.62□□□□□ -1.03
USP11-211ENST00000489111 CYSLTR2Q9NS75 346 aa8.62□□□□□ -1.03
USP11-211ENST00000489111 RHBDL2Q9NX52 303 aa8.62□□□□□ -1.03
USP11-211ENST00000489111 GPR160Q9UJ42 338 aa8.62□□□□□ -1.03
USP11-211ENST00000489111 V9GYH0 126 aa8.62□□□□□ -1.03
USP11-211ENST00000489111 DOCK7Q96N67 2140 aa8.62□□□□□ -1.03
USP11-211ENST00000489111 RP1L1Q8IWN7 2480 aaPredicted RBP8.61□□□□□ -1.03
USP11-211ENST00000489111 NKX2-6A6NCS4 301 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 ATP6V1G2-DDX39BF2Z307 99 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 TIMM8AO60220 97 aaPredicted RBP8.61□□□□□ -1.03
USP11-211ENST00000489111 CD37P11049 281 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 PTAFRP25105 342 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 CD40P25942 277 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 PTBP1P26599 531 aaKnown RBP eCLIP8.61□□□□□ -1.031e-13■■□□□ 12.1
USP11-211ENST00000489111 OR3A4PP47883 348 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 UQCRFS1P47985 274 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 RBP2P50120 134 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 FUT6P51993 359 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 ATP1B3P54709 279 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 MADCAM1Q13477 382 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 IGFBP7Q16270 282 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 C2orf76Q3KRA6 126 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 ZNF718Q3SXZ3 478 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 DMRTC1Q5HYR2 192 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 RGS7BPQ6MZT1 257 aaPredicted RBP8.61□□□□□ -1.03
USP11-211ENST00000489111 GLIPR1L1Q6UWM5 242 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 ANGPTL5Q86XS5 388 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 MED12LQ86YW9 2145 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 OR4D6Q8NGJ1 314 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 KLF14Q8TD94 323 aaPredicted RBP8.61□□□□□ -1.03
USP11-211ENST00000489111 SLC25A28Q96A46 364 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 RFT1Q96AA3 541 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 SLC25A38Q96DW6 304 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 S100A16Q96FQ6 103 aaKnown RBP8.61□□□□□ -1.03
USP11-211ENST00000489111 MARS2Q96GW9 593 aaKnown RBP8.61□□□□□ -1.03
USP11-211ENST00000489111 CCDC32Q9BV29 185 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 ELL3Q9HB65 397 aaPredicted RBP8.61□□□□□ -1.03
USP11-211ENST00000489111 MRPL15Q9P015 296 aaKnown RBP8.61□□□□□ -1.03
USP11-211ENST00000489111 NDRG3Q9UGV2 375 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 NOP16Q9Y3C1 178 aaKnown RBP8.61□□□□□ -1.03
USP11-211ENST00000489111 MPC1Q9Y5U8 109 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 SVILO95425 2214 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 USP24Q9UPU5 2620 aa8.61□□□□□ -1.03
USP11-211ENST00000489111 TPRP12270 2363 aaKnown RBP8.6□□□□□ -1.03
USP11-211ENST00000489111 TMEM272A0A1B0GTI8 110 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 THBDP07204 575 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 TMEM225BP0DP42 221 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 CA6P23280 308 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 MPV17P39210 176 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 PTGFRP43088 359 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 NR4A2P43354 598 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 PITPNBP48739 271 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 PITPNAQ00169 270 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 SORDQ00796 357 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 CEACAM21Q3KPI0 293 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 TMEM69Q5SWH9 247 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 MBNL2Q5VZF2 373 aaKnown RBP8.6□□□□□ -1.03
USP11-211ENST00000489111 SEZ6L2Q6UXD5 910 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 OR2W3Q7Z3T1 314 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 LYPD6Q86Y78 171 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 CMTM4Q8IZR5 234 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 OR8H2Q8N162 312 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 GDPD1Q8N9F7 314 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 OR5D18Q8NGL1 313 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 OR8S1Q8NH09 359 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 SSC4DQ8WTU2 575 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 HAVCR1Q96D42 359 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 ADAT1Q9BUB4 502 aaKnown RBP8.6□□□□□ -1.03
USP11-211ENST00000489111 RTL8AQ9BWD3 113 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 CST11Q9H112 138 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 ATG5Q9H1Y0 275 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 ABCG5Q9H222 651 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 KCNK15Q9H427 330 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 DIABLOQ9NR28 239 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 RABL2AQ9UBK7 228 aaPredicted RBP8.6□□□□□ -1.03
USP11-211ENST00000489111 GHRLQ9UBU3 117 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 PURGQ9UJV8 347 aaKnown RBP8.6□□□□□ -1.03
USP11-211ENST00000489111 RABL2BQ9UNT1 228 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 CACNA1CQ13936 2221 aa8.6□□□□□ -1.03
USP11-211ENST00000489111 SPENQ96T58 3664 aaKnown RBP8.59□□□□□ -1.03
USP11-211ENST00000489111 A0A0G2JMP0 313 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.59□□□□□ -1.03
USP11-211ENST00000489111 A0A0X1KG70 313 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 PQLC2LA1A4F0 135 aa8.59□□□□□ -1.03
USP11-211ENST00000489111 METTL21EPA6NDL7 271 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms