RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 OR10AD1Q8NGE0 317 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 OR5A2Q8NGI9 324 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 OR51A4Q8NGJ6 313 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 OR13C3Q8NGS6 347 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 OR10AC1Q8NH08 325 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 OR8S1Q8NH09 359 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 OR5P3Q8WZ94 311 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 RDH5Q92781 318 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 ERGIC1Q969X5 290 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 FGGYQ96C11 551 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 MEGF10Q96KG7 1140 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 PGLYRP3Q96LB9 341 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 TECTBQ96PL2 329 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 OR2V2Q96R30 315 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 MICU1Q9BPX6 476 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 ZNF696Q9H7X3 374 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 PLEKHA1Q9HB21 404 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 DLL4Q9NR61 685 aa11.29□□□□□ -0.6
COL4A6-207ENST00000487645 LOC100289279A0A1B0GTE1 492 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 H3BSH0 61 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 IFNL4K9M1U5 179 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 SSX4O60224 188 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 LMX1BO60663 402 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 NCR1O76036 304 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 PTBP3O95758 552 aaKnown RBP11.28□□□□□ -0.6
COL4A6-207ENST00000487645 CSF3P09919 207 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 HSMCR30P0CW71 290 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 ZNF20P17024 532 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 GATA4P43694 442 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 RPS11P62280 158 aaKnown RBP eCLIP11.28□□□□□ -0.6
COL4A6-207ENST00000487645 MAB21L1Q13394 359 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 FAM76BQ5HYJ3 339 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 MOB3CQ70IA8 216 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 UTS2BQ765I0 119 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 SERPINA12Q8IW75 414 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 ZDHHC23Q8IYP9 409 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 PARP16Q8N5Y8 322 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 OR5D14Q8NGL3 314 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 ITLN1Q8WWA0 313 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 RGP1Q92546 391 aaPredicted RBP11.28□□□□□ -0.6
COL4A6-207ENST00000487645 THRSPQ92748 146 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 UFD1Q92890 307 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 ITPKCQ96DU7 683 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 RTL8AQ9BWD3 113 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 PPP1R3EQ9H7J1 279 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 DHDHQ9UQ10 334 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 TEX15Q9BXT5 2789 aa11.28□□□□□ -0.6
COL4A6-207ENST00000487645 CCDC168Q8NDH2 2452 aa11.27□□□□□ -0.61
COL4A6-207ENST00000487645 IGHV1-69-2A0A0G2JMI3 117 aa11.27□□□□□ -0.61
COL4A6-207ENST00000487645 TRBV5-5A0A0J9YX44 114 aa11.27□□□□□ -0.61
COL4A6-207ENST00000487645 PNMA8CA0A1B0GUJ8 204 aa11.27□□□□□ -0.61
COL4A6-207ENST00000487645 ANKRD61A6NGH8 418 aa11.27□□□□□ -0.61
COL4A6-207ENST00000487645 A6NIN4 97 aa11.27□□□□□ -0.61
COL4A6-207ENST00000487645 TMEM210A6NLX4 147 aa11.27□□□□□ -0.61
COL4A6-207ENST00000487645 GATBO75879 557 aaKnown RBP11.27□□□□□ -0.61
COL4A6-207ENST00000487645 LY6HO94772 140 aa11.27□□□□□ -0.61
COL4A6-207ENST00000487645 ALX3O95076 343 aa11.27□□□□□ -0.61
COL4A6-207ENST00000487645 CD2P06729 351 aa11.27□□□□□ -0.61
COL4A6-207ENST00000487645 COL8A2P25067 703 aa11.27□□□□□ -0.61
COL4A6-207ENST00000487645 ART1P52961 327 aa11.27□□□□□ -0.61
COL4A6-207ENST00000487645 TMEM33P57088 247 aa11.27□□□□□ -0.61
COL4A6-207ENST00000487645 TRAM1Q15629 374 aa11.27□□□□□ -0.61
COL4A6-207ENST00000487645 DNM1P46Q6ZS02 220 aa11.27□□□□□ -0.61
COL4A6-207ENST00000487645 TSEN15Q8WW01 171 aaKnown RBP11.27□□□□□ -0.61
COL4A6-207ENST00000487645 ADAT3Q96EY9 351 aaPredicted RBP11.27□□□□□ -0.61
COL4A6-207ENST00000487645 RNF170Q96K19 258 aa11.27□□□□□ -0.61
COL4A6-207ENST00000487645 OPALINQ96PE5 141 aa11.27□□□□□ -0.61
COL4A6-207ENST00000487645 CHST5Q9GZS9 411 aa11.27□□□□□ -0.61
COL4A6-207ENST00000487645 GCM1Q9NP62 436 aa11.27□□□□□ -0.61
COL4A6-207ENST00000487645 PPP1R3CQ9UQK1 317 aa11.27□□□□□ -0.61
COL4A6-207ENST00000487645 MYO9AB2RTY4 2548 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 OR5B21A6NL26 309 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 TRIM64CA6NLI5 447 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 CYSRT1A8MQ03 144 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 NDUFS8O00217 210 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 OCM2P0CE71 109 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 PSMA1P25786 263 aaKnown RBP11.26□□□□□ -0.61
COL4A6-207ENST00000487645 GIFP27352 417 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 PDLIM4P50479 330 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 GNG3P63215 75 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 UBE2V2Q15819 145 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 CLEC12BQ2HXU8 276 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 ZNF181Q2M3W8 571 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 HFEQ30201 348 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 Q499Y3 187 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 SPRNQ5BIV9 151 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 ARMCX4Q5H9R4 360 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 CEP78Q5JTW2 689 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 LIPKQ5VXJ0 399 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 PLCXD3Q63HM9 321 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 CLEC2AQ6UVW9 174 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 UNQ9370/PRO34162Q6UXP9 181 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 PHC2Q8IXK0 858 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 HPSE2Q8WWQ2 592 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 FAM168AQ92567 244 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 YIPF5Q969M3 257 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 ZCCHC4Q9H5U6 513 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 CHODLQ9H9P2 273 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 FN3KRPQ9HA64 309 aa11.26□□□□□ -0.61
COL4A6-207ENST00000487645 NEK6Q9HC98 313 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms