RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 GNALP38405 381 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 DLX1P56177 255 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 GMFBP60983 142 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 IL5RAQ01344 420 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 IKZF1Q13422 519 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 OCLNQ16625 522 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 PDLIM3Q53GG5 364 aaPredicted RBP10.03□□□□□ -0.8
VPS16-208ENST00000487461 STUMQ69YW2 141 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 SLC36A1Q7Z2H8 476 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 TMEM179BQ7Z7N9 219 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.03□□□□□ -0.8
VPS16-208ENST00000487461 Q8N7P7 452 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 OTOSQ8NHW6 89 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 LINC01006Q8NI28 216 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 THEM6Q8WUY1 208 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 OR5P3Q8WZ94 311 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 C12orf43Q96C57 262 aaKnown RBP10.03□□□□□ -0.8
VPS16-208ENST00000487461 LYZL4Q96KX0 146 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 MICU1Q9BPX6 476 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 CHID1Q9BWS9 393 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 WDR13Q9H1Z4 485 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 RGCCQ9H4X1 137 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 SIRT7Q9NRC8 400 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 SNTG1Q9NSN8 517 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 HAO2Q9NYQ3 351 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 ONECUT1Q9UBC0 465 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 DNAJB11Q9UBS4 358 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 PRPF19Q9UMS4 504 aaKnown RBP10.03□□□□□ -0.8
VPS16-208ENST00000487461 RNF114Q9Y508 228 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 MPC1Q9Y5U8 109 aa10.03□□□□□ -0.8
VPS16-208ENST00000487461 CMYA5Q8N3K9 4069 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 A0A1B0GVI7 797 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 ANXA2P2A6NMY6 339 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 RNASEK-C17orf49H0YIS7 233 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 EBAG9O00559 213 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 GPR37O15354 613 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 CST4P01036 141 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 CST1P01037 141 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 SELLP14151 372 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 POU1F1P28069 291 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 RPL15P61313 204 aaKnown RBP10.02□□□□□ -0.81
VPS16-208ENST00000487461 PRDX4Q13162 271 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 GINS1Q14691 196 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 FAM76BQ5HYJ3 339 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 PLBD1Q6P4A8 553 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 BRICD5Q6PL45 260 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 OR10Z1Q8NGY1 313 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 PIGCQ92535 297 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 RNF170Q96K19 258 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 CLPTM1LQ96KA5 538 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 DMRTB1Q96MA1 342 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 RAB3IPQ96QF0 476 aaPredicted RBP10.02□□□□□ -0.81
VPS16-208ENST00000487461 CCT8L2Q96SF2 557 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 DCTN5Q9BTE1 182 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 RTL8AQ9BWD3 113 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 SEMA6AQ9H2E6 1030 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 TAS2R1Q9NYW7 299 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 KLHDC2Q9Y2U9 406 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 FAM96BQ9Y3D0 163 aa10.02□□□□□ -0.81
VPS16-208ENST00000487461 A0A1W2PRD5 423 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 A0A1W2PRF3 423 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 A0A1W2PRM7 423 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 ARRDC5A6NEK1 342 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 TMEM210A6NLX4 147 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 PRR23D1E9PI22 279 aaPredicted RBP10.01□□□□□ -0.81
VPS16-208ENST00000487461 AKR7A2O43488 359 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 CLPXO76031 633 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 LYNP07948 512 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 PRR23D2P0DMB1 279 aaPredicted RBP10.01□□□□□ -0.81
VPS16-208ENST00000487461 PAICSP22234 425 aaKnown RBP10.01□□□□□ -0.81
VPS16-208ENST00000487461 HCCSP53701 268 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 PROK1P58294 105 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 GK3PQ14409 553 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 SNCBQ16143 134 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 TAF9Q16594 264 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 MIDNQ504T8 468 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 LRRC10Q5BKY1 277 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 ASPHD2Q6ICH7 369 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 METAP1DQ6UB28 335 aaPredicted RBP10.01□□□□□ -0.81
VPS16-208ENST00000487461 ZNF788Q6ZQV5 615 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 KCTD8Q6ZWB6 473 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 CPOQ8IVL8 374 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 ADGRG5Q8IZF4 528 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 CMTM4Q8IZR5 234 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 ZNF454Q8N9F8 522 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 ZSCAN4Q8NAM6 433 aaPredicted RBP10.01□□□□□ -0.81
VPS16-208ENST00000487461 OR8B12Q8NGG6 310 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 C8orf46Q8TAG6 207 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 BCAS4Q8TDM0 211 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 TNFRSF14Q92956 283 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 ASB9Q96DX5 294 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 LRGUKQ96M69 825 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 GAFA1Q96PS6 74 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 PKP2Q99959 881 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 DPAGT1Q9H3H5 408 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 ZNF391Q9UJN7 358 aa10.01□□□□□ -0.81
VPS16-208ENST00000487461 RRP15Q9Y3B9 282 aaKnown RBP10.01□□□□□ -0.81
VPS16-208ENST00000487461 HMGN1P05114 100 aa10□□□□□ -0.81
VPS16-208ENST00000487461 ALOX5APP20292 161 aa10□□□□□ -0.81
VPS16-208ENST00000487461 PRKACGP22612 351 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 235.8 ms