RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 ANKRD60Q9BZ19 345 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 SLC25A39Q9BZJ4 359 aaPredicted RBP3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 TRIM4Q9C037 500 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 MRPS30Q9NP92 439 aaKnown RBP3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 ZDHHC4Q9NPG8 344 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 LYARQ9NX58 379 aaKnown RBP3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 PEF1Q9UBV8 284 aaKnown RBP3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 CD84Q9UIB8 345 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 ZNF223Q9UK11 482 aaPredicted RBP3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 SLC17A4Q9Y2C5 497 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 SPTA1P02549 2419 aa3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 ANKRD17O75179 2603 aaKnown RBP3.2□□□□□ -1.9
PRPF38A-203ENST00000487160 IGLV11-55A0A075B6I3 123 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 TRBV9A0A0B4J1U6 114 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 GABRR3A8MPY1 467 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 K7EQS6 105 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 RRP8O43159 456 aaKnown RBP3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 SLC37A4O43826 429 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 FABP3P05413 133 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 PLEKP08567 350 aaPredicted RBP3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 HLA-EP13747 358 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 ATF6P18850 670 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 OMGP23515 440 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 GPX4P36969 197 aaPredicted RBP3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 CDKN2BP42772 138 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 MAGEA1P43355 309 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 UBE2AP49459 152 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 RND2P52198 227 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 CRISP1P54107 249 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 SEMG2Q02383 582 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 IFT88Q13099 833 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 MADCAM1Q13477 382 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 PDGFRLQ15198 375 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 POU2AF1Q16633 256 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 KLHL40Q2TBA0 621 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 PTPN20Q4JDL3 420 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 NCCRP1Q6ZVX7 275 aaPredicted RBP3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 SSX9Q7RTT3 188 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 HDDC2Q7Z4H3 204 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 ZBTB8OSQ8IWT0 167 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 ZFP41Q8N8Y5 198 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 FAM184AQ8NB25 1140 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 OR4S2Q8NH73 311 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 LYPD6BQ8NI32 183 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 CCDC12Q8WUD4 166 aaPredicted RBP3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 GSDMAQ96QA5 445 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 TMEM165Q9HC07 324 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 RETNQ9HD89 108 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 C20orf96Q9NUD7 363 aaPredicted RBP3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 NID2Q14112 1375 aa3.19□□□□□ -1.9
PRPF38A-203ENST00000487160 COL27A1Q8IZC6 1860 aaPredicted RBP3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 IGHV1OR15-9A0A0B4J2B8 117 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 H0YHG0 523 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 GOLGA8TH3BQL2 631 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 NUPL2O15504 423 aaKnown RBP3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 CLDN11O75508 207 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 RAB3DO95716 219 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 CRYGCP07315 174 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 PRPS2P11908 318 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 CCNB1P14635 433 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 GABRG2P18507 467 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 STOMP27105 288 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 CYB561P49447 251 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 CLDN6P56747 220 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 CARD18P57730 90 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 STXBP1P61764 594 aaKnown RBP3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 GGTLC2Q14390 218 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 HES5Q5TA89 166 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 TSPO2Q5TGU0 170 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 DNAJC24Q6P3W2 148 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 CMC1Q7Z7K0 106 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 TMEM150AQ86TG1 271 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 PDCL2Q8N4E4 241 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 OTUD6BQ8N6M0 293 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 Q8N976 141 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 OR10J6PQ8NGY7 276 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 LKAAEAR1Q8TD35 194 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 ZFP90Q8TF47 636 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 C8orf44Q96CB5 159 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 LINC00597Q9H2U6 94 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 IFI27L2Q9H2X8 130 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 LYRM4Q9HD34 91 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 CCDC59Q9P031 241 aaKnown RBP3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 PSG8Q9UQ74 426 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 RHBDD3Q9Y3P4 386 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 PIKFYVEQ9Y2I7 2098 aa3.18□□□□□ -1.9
PRPF38A-203ENST00000487160 TET2Q6N021 2002 aaPredicted RBP3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 LRBAP50851 2863 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 BSNQ9UPA5 3926 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 A0A096LNJ9 63 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 OTCP00480 354 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 SRMP19623 302 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 HMOX2P30519 316 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 CEACAM6P40199 344 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 MRPL19P49406 292 aaKnown RBP3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 KDSRQ06136 332 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 TMED1Q13445 227 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 OR7A5Q15622 319 aa3.17□□□□□ -1.9
PRPF38A-203ENST00000487160 NKAIN1Q4KMZ8 207 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms