RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 PIGCQ92535 297 aa20.25■□□□□ 0.83
LIME1-206ENST00000487026 FGF23Q9GZV9 251 aaPredicted RBP20.25■□□□□ 0.83
LIME1-206ENST00000487026 TLNRD1Q9H1K6 362 aa20.25■□□□□ 0.83
LIME1-206ENST00000487026 WDR13Q9H1Z4 485 aa20.25■□□□□ 0.83
LIME1-206ENST00000487026 RGCCQ9H4X1 137 aa20.25■□□□□ 0.83
LIME1-206ENST00000487026 ZNF556Q9HAH1 456 aa20.25■□□□□ 0.83
LIME1-206ENST00000487026 ONECUT1Q9UBC0 465 aa20.25■□□□□ 0.83
LIME1-206ENST00000487026 A0A0U1RQK1 487 aa20.24■□□□□ 0.83
LIME1-206ENST00000487026 ANXA2P2A6NMY6 339 aa20.24■□□□□ 0.83
LIME1-206ENST00000487026 AMY2BP19961 511 aa20.24■□□□□ 0.83
LIME1-206ENST00000487026 RPS7P62081 194 aaKnown RBP20.24■□□□□ 0.83
LIME1-206ENST00000487026 IL5RAQ01344 420 aa20.24■□□□□ 0.83
LIME1-206ENST00000487026 PRB3Q04118 309 aaPredicted RBP20.24■□□□□ 0.83
LIME1-206ENST00000487026 KCTD8Q6ZWB6 473 aa20.24■□□□□ 0.83
LIME1-206ENST00000487026 SLC36A1Q7Z2H8 476 aa20.24■□□□□ 0.83
LIME1-206ENST00000487026 VMO1Q7Z5L0 202 aa20.24■□□□□ 0.83
LIME1-206ENST00000487026 SCCPDHQ8NBX0 429 aa20.24■□□□□ 0.83
LIME1-206ENST00000487026 OR8B12Q8NGG6 310 aa20.24■□□□□ 0.83
LIME1-206ENST00000487026 OR5P3Q8WZ94 311 aa20.24■□□□□ 0.83
LIME1-206ENST00000487026 RTL8AQ9BWD3 113 aa20.24■□□□□ 0.83
LIME1-206ENST00000487026 SLITRK2Q9H156 845 aa20.24■□□□□ 0.83
LIME1-206ENST00000487026 HAO2Q9NYQ3 351 aa20.24■□□□□ 0.83
LIME1-206ENST00000487026 C1RLQ9NZP8 487 aa20.24■□□□□ 0.83
LIME1-206ENST00000487026 MPC1Q9Y5U8 109 aa20.24■□□□□ 0.83
LIME1-206ENST00000487026 PRODHO43272 600 aa20.23■□□□□ 0.83
LIME1-206ENST00000487026 SELLP14151 372 aa20.23■□□□□ 0.83
LIME1-206ENST00000487026 RAG2P55895 527 aa20.23■□□□□ 0.83
LIME1-206ENST00000487026 CDONQ4KMG0 1287 aa20.23■□□□□ 0.83
LIME1-206ENST00000487026 SPATA24Q86W54 205 aa20.23■□□□□ 0.83
LIME1-206ENST00000487026 FTMTQ8N4E7 242 aa20.23■□□□□ 0.83
LIME1-206ENST00000487026 LY6G5BQ8NDX9 201 aa20.23■□□□□ 0.83
LIME1-206ENST00000487026 RNF170Q96K19 258 aa20.23■□□□□ 0.83
LIME1-206ENST00000487026 PKP2Q99959 881 aa20.23■□□□□ 0.83
LIME1-206ENST00000487026 DNAJB11Q9UBS4 358 aa20.23■□□□□ 0.83
LIME1-206ENST00000487026 LRP12Q9Y561 859 aa20.23■□□□□ 0.83
LIME1-206ENST00000487026 MMP24Q9Y5R2 645 aa20.23■□□□□ 0.83
LIME1-206ENST00000487026 CMYA5Q8N3K9 4069 aa20.22■□□□□ 0.83
LIME1-206ENST00000487026 PSMD9O00233 223 aa20.22■□□□□ 0.83
LIME1-206ENST00000487026 AKR7A2O43488 359 aa20.22■□□□□ 0.83
LIME1-206ENST00000487026 NDUFB3O43676 98 aa20.22■□□□□ 0.83
LIME1-206ENST00000487026 CST4P01036 141 aa20.22■□□□□ 0.83
LIME1-206ENST00000487026 SLC2A5P22732 501 aa20.22■□□□□ 0.83
LIME1-206ENST00000487026 TGM4P49221 684 aa20.22■□□□□ 0.83
LIME1-206ENST00000487026 SNCBQ16143 134 aa20.22■□□□□ 0.83
LIME1-206ENST00000487026 C11orf91Q3C1V1 193 aa20.22■□□□□ 0.83
LIME1-206ENST00000487026 STUMQ69YW2 141 aa20.22■□□□□ 0.83
LIME1-206ENST00000487026 KRT77Q7Z794 578 aa20.22■□□□□ 0.83
LIME1-206ENST00000487026 PIP4P2Q8N4L2 257 aa20.22■□□□□ 0.83
LIME1-206ENST00000487026 TMEM86BQ8N661 226 aa20.22■□□□□ 0.83
LIME1-206ENST00000487026 SSMEM1Q8WWF3 244 aa20.22■□□□□ 0.83
LIME1-206ENST00000487026 BEX1Q9HBH7 125 aa20.22■□□□□ 0.83
LIME1-206ENST00000487026 LAMP5Q9UJQ1 280 aa20.22■□□□□ 0.83
LIME1-206ENST00000487026 KPTNQ9Y664 436 aa20.22■□□□□ 0.83
LIME1-206ENST00000487026 KCNAB3O43448 404 aa20.21■□□□□ 0.83
LIME1-206ENST00000487026 KNG1P01042 644 aa20.21■□□□□ 0.83
LIME1-206ENST00000487026 IGHV4-59P01825 116 aa20.21■□□□□ 0.83
LIME1-206ENST00000487026 ANXA8P13928 327 aa20.21■□□□□ 0.83
LIME1-206ENST00000487026 ALOX5APP20292 161 aa20.21■□□□□ 0.83
LIME1-206ENST00000487026 DLX1P56177 255 aa20.21■□□□□ 0.83
LIME1-206ENST00000487026 PSMA6P60900 246 aaKnown RBP20.21■□□□□ 0.83
LIME1-206ENST00000487026 CBX1P83916 185 aa20.21■□□□□ 0.83
LIME1-206ENST00000487026 APOFQ13790 326 aa20.21■□□□□ 0.83
LIME1-206ENST00000487026 DMRTC1Q5HYR2 192 aa20.21■□□□□ 0.83
LIME1-206ENST00000487026 SLC35D3Q5M8T2 416 aa20.21■□□□□ 0.83
LIME1-206ENST00000487026 TREML4Q6UXN2 200 aa20.21■□□□□ 0.83
LIME1-206ENST00000487026 TBC1D15Q8TC07 691 aa20.21■□□□□ 0.83
LIME1-206ENST00000487026 HPSE2Q8WWQ2 592 aa20.21■□□□□ 0.83
LIME1-206ENST00000487026 C12orf43Q96C57 262 aaKnown RBP20.21■□□□□ 0.83
LIME1-206ENST00000487026 RAB3IPQ96QF0 476 aaPredicted RBP20.21■□□□□ 0.83
LIME1-206ENST00000487026 SIRT7Q9NRC8 400 aa20.21■□□□□ 0.83
LIME1-206ENST00000487026 TVP23BQ9NYZ1 205 aa20.21■□□□□ 0.83
LIME1-206ENST00000487026 ZNF391Q9UJN7 358 aa20.21■□□□□ 0.83
LIME1-206ENST00000487026 POMT1Q9Y6A1 747 aa20.21■□□□□ 0.83
LIME1-206ENST00000487026 FKBP6O75344 327 aa20.2■□□□□ 0.82
LIME1-206ENST00000487026 MRPL3P09001 348 aaKnown RBP20.2■□□□□ 0.82
LIME1-206ENST00000487026 FLOT2Q14254 428 aa20.2■□□□□ 0.82
LIME1-206ENST00000487026 SNAPC1Q16533 368 aa20.2■□□□□ 0.82
LIME1-206ENST00000487026 ATPAF1Q5TC12 328 aaPredicted RBP20.2■□□□□ 0.82
LIME1-206ENST00000487026 OR10Z1Q8NGY1 313 aa20.2■□□□□ 0.82
LIME1-206ENST00000487026 OR4F5Q8NH21 305 aa20.2■□□□□ 0.82
LIME1-206ENST00000487026 H1FXQ92522 213 aaKnown RBP20.2■□□□□ 0.82
LIME1-206ENST00000487026 SEMA6AQ9H2E6 1030 aa20.2■□□□□ 0.82
LIME1-206ENST00000487026 DNAJB9Q9UBS3 223 aa20.2■□□□□ 0.82
LIME1-206ENST00000487026 A0A1B0GVI7 797 aa20.19■□□□□ 0.82
LIME1-206ENST00000487026 A0A1W2PRD5 423 aa20.19■□□□□ 0.82
LIME1-206ENST00000487026 A0A1W2PRF3 423 aa20.19■□□□□ 0.82
LIME1-206ENST00000487026 A0A1W2PRM7 423 aa20.19■□□□□ 0.82
LIME1-206ENST00000487026 TMEM210A6NLX4 147 aa20.19■□□□□ 0.82
LIME1-206ENST00000487026 GYG2O15488 501 aa20.19■□□□□ 0.82
LIME1-206ENST00000487026 IER3P46695 156 aa20.19■□□□□ 0.82
LIME1-206ENST00000487026 GPM6AP51674 278 aa20.19■□□□□ 0.82
LIME1-206ENST00000487026 LRRC10Q5BKY1 277 aa20.19■□□□□ 0.82
LIME1-206ENST00000487026 FAM76BQ5HYJ3 339 aa20.19■□□□□ 0.82
LIME1-206ENST00000487026 OLFML2AQ68BL7 652 aa20.19■□□□□ 0.82
LIME1-206ENST00000487026 ZDHHC23Q8IYP9 409 aa20.19■□□□□ 0.82
LIME1-206ENST00000487026 HIST1H2AAQ96QV6 131 aa20.19■□□□□ 0.82
LIME1-206ENST00000487026 DCTN5Q9BTE1 182 aa20.19■□□□□ 0.82
LIME1-206ENST00000487026 NIPAL2Q9H841 368 aa20.19■□□□□ 0.82
LIME1-206ENST00000487026 SLC25A19Q9HC21 320 aa20.19■□□□□ 0.82
LIME1-206ENST00000487026 A0A1B0GUS0 222 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms