RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 PPA1Q15181 289 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 PNLIPRP3Q17RR3 467 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 TBC1D28Q2M2D7 210 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 C3orf36Q3SXR2 165 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 C9orf135Q5VTT2 229 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 ZNF585AQ6P3V2 769 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 BEND4Q6ZU67 534 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 BTN2A1Q7KYR7 527 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 MDP1Q86V88 176 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 ZNF101Q8IZC7 436 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 TMEM229BQ8NBD8 167 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 OR56B1Q8NGI3 324 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 OR10R2Q8NGX6 335 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 OR2AE1Q8NHA4 323 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 STARD4Q96DR4 205 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 SEH1LQ96EE3 360 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 MRPS24Q96EL2 167 aaKnown RBP10.07□□□□□ -0.8
PRKCB-207ENST00000486868 SFXN3Q9BWM7 321 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 TMEM59Q9BXS4 323 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 CACNG6Q9BXT2 260 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 LPAR5Q9H1C0 372 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 MMP28Q9H239 520 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 NOX3Q9HBY0 568 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 KLK11Q9UBX7 282 aa10.07□□□□□ -0.8
PRKCB-207ENST00000486868 DLL1O00548 723 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 AKR7A2O43488 359 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 DHFRP00374 187 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 IL2RAP01589 272 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 IGKV3-15P01624 115 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 TCRBP04435 133 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 TBPP20226 339 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 OR3A4PP47883 348 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 SRP9P49458 86 aaKnown RBP10.06□□□□□ -0.8
PRKCB-207ENST00000486868 TDGF1P3P51864 188 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 ATP1B3P54709 279 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 RPS27AP62979 156 aaKnown RBP10.06□□□□□ -0.8
PRKCB-207ENST00000486868 GK2Q14410 553 aaPredicted RBP10.06□□□□□ -0.8
PRKCB-207ENST00000486868 HIKESHIQ53FT3 197 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 RSBN1Q5VWQ0 802 aaPredicted RBP10.06□□□□□ -0.8
PRKCB-207ENST00000486868 UNQ6126/PRO20091Q6UXV3 157 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 SEM1Q6ZVN7 128 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 MRPL21Q7Z2W9 205 aaKnown RBP10.06□□□□□ -0.8
PRKCB-207ENST00000486868 SAXO1Q8IYX7 474 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 CNEP1R1Q8N9A8 125 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 SLC30A7Q8NEW0 376 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 Q8NFD4 153 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 OR56B4Q8NH76 319 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 BORCS8Q96FH0 119 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 S100A13Q99584 98 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 USB1Q9BQ65 265 aaKnown RBP10.06□□□□□ -0.8
PRKCB-207ENST00000486868 SLX1AQ9BQ83 275 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 ZNF71Q9NQZ8 489 aaPredicted RBP10.06□□□□□ -0.8
PRKCB-207ENST00000486868 EIF3KQ9UBQ5 218 aaKnown RBP10.06□□□□□ -0.8
PRKCB-207ENST00000486868 ANAPC10Q9UM13 185 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 TP53TG5Q9Y2B4 290 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 AMDHD2Q9Y303 409 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 NOP16Q9Y3C1 178 aaKnown RBP10.06□□□□□ -0.8
PRKCB-207ENST00000486868 MPC1Q9Y5U8 109 aa10.06□□□□□ -0.8
PRKCB-207ENST00000486868 TNRC6AQ8NDV7 1962 aaKnown RBP10.06□□□□□ -0.8
PRKCB-207ENST00000486868 CUL9Q8IWT3 2517 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 C7orf66A4D0T2 115 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 TPD52L2O43399 206 aaKnown RBP10.05□□□□□ -0.8
PRKCB-207ENST00000486868 PRAF2O60831 178 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 CD74P04233 296 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 HNRNPCP07910 306 aaKnown RBP eCLIP10.05□□□□□ -0.8
PRKCB-207ENST00000486868 AKAIN1P0CW23 69 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 PSMB1P20618 241 aaKnown RBP10.05□□□□□ -0.8
PRKCB-207ENST00000486868 MPZP25189 248 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 HOXC12P31275 282 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 RCVRNP35243 200 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 CBX5P45973 191 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 MECP2P51608 486 aaKnown RBP10.05□□□□□ -0.8
PRKCB-207ENST00000486868 MTCP1P56278 107 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 PER3P56645 1201 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 TAS2R19P59542 299 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 OR10K2Q6IF99 312 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 VWA1Q6PCB0 445 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 FBXW12Q6X9E4 464 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 SSX8Q7RTT4 187 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 AKAP14Q86UN6 197 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 GCNT2Q8N0V5 402 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 WDR31Q8NA23 367 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 TNFAIP8L1Q8WVP5 186 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 UPRTQ96BW1 309 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 METTL9Q9H1A3 318 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 TP63Q9H3D4 680 aaPredicted RBP10.05□□□□□ -0.8
PRKCB-207ENST00000486868 KCNK15Q9H427 330 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 GPR173Q9NS66 373 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 ETAA1Q9NY74 926 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 FAM215AQ9Y5M1 114 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 CACNA1GO43497 2377 aa10.05□□□□□ -0.8
PRKCB-207ENST00000486868 CD300LBA8K4G0 201 aa10.04□□□□□ -0.8
PRKCB-207ENST00000486868 FOXI3A8MTJ6 420 aaPredicted RBP10.04□□□□□ -0.8
PRKCB-207ENST00000486868 SERPINE3A8MV23 424 aa10.04□□□□□ -0.8
PRKCB-207ENST00000486868 H3BUI4 141 aa10.04□□□□□ -0.8
PRKCB-207ENST00000486868 MPIG6BO95866 241 aa10.04□□□□□ -0.8
PRKCB-207ENST00000486868 IGLV1-44P01699 117 aa10.04□□□□□ -0.8
PRKCB-207ENST00000486868 HIST1H1DP16402 221 aaKnown RBP10.04□□□□□ -0.8
PRKCB-207ENST00000486868 SELEP16581 610 aa10.04□□□□□ -0.8
PRKCB-207ENST00000486868 NAT1P18440 290 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms