RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 NTN1O95631 604 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 PDYNP01213 254 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 C2P06681 752 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 HCKP08631 526 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 IL3P08700 152 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 FBP1P09467 338 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 VPREB1P12018 145 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 NQO1P15559 274 aaKnown RBP5.85□□□□□ -1.47
HDAC3-209ENST00000486618 APEX1P27695 318 aaKnown RBP5.85□□□□□ -1.47
HDAC3-209ENST00000486618 PRDX2P32119 198 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 CDAP32320 146 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 THBS4P35443 961 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 NR4A2P43354 598 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 OR3A2P47893 321 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 RPL14P50914 215 aaKnown RBP5.85□□□□□ -1.47
HDAC3-209ENST00000486618 MVDP53602 400 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 BLOC1S1P78537 153 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 NAAAQ02083 359 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 TRAF3Q13114 568 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 ARL13AQ5H913 290 aaPredicted RBP5.85□□□□□ -1.47
HDAC3-209ENST00000486618 TRIQKQ629K1 86 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 DPY19L4Q7Z388 723 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 TMED4Q7Z7H5 227 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 MTURNQ8N3F0 131 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 STX19Q8N4C7 294 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 C3orf56Q8N813 242 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 OR4F6Q8NGB9 312 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 FNDC8Q8TC99 324 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 ERGIC1Q969X5 290 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 FBXO17Q96EF6 278 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 AJUBAQ96IF1 538 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 SLC38A2Q96QD8 506 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 RSG1Q9BU20 258 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 TMED9Q9BVK6 235 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 YTHDF1Q9BYJ9 559 aaKnown RBP5.85□□□□□ -1.47
HDAC3-209ENST00000486618 ULBP2Q9BZM5 246 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 NARFLQ9H6Q4 476 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 ELOVL3Q9HB03 270 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 MLXQ9UH92 298 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 RAB21Q9UL25 225 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 MGAT4AQ9UM21 535 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 GSTK1Q9Y2Q3 226 aa5.85□□□□□ -1.47
HDAC3-209ENST00000486618 CSDC2Q9Y534 153 aaKnown RBP5.85□□□□□ -1.47
HDAC3-209ENST00000486618 A0A096LPK6 155 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 TMEM89A2RUT3 159 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 OR5H1A6NKK0 313 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 VWC2LB2RUY7 222 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 RGS14O43566 566 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 PRKYO43930 277 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 PCDH7O60245 1069 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 RAMP3O60896 148 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 IFNA21P01568 189 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 TFP02787 698 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 JUNP05412 331 aaKnown RBP5.84□□□□□ -1.47
HDAC3-209ENST00000486618 NGFRP08138 427 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 NBEAP1P0C6P0 100 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 ZNF12P17014 697 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 STOMP27105 288 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 ELK4P28324 431 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 LAP3P28838 519 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 NTSP30990 170 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 GABRA3P34903 492 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 SFTPDP35247 375 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 NCBP2P52298 156 aaKnown RBP eCLIP5.84□□□□□ -1.47
HDAC3-209ENST00000486618 FAM3BP58499 235 aaPredicted RBP5.84□□□□□ -1.47
HDAC3-209ENST00000486618 RBX1P62877 108 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 SLC18A2Q05940 514 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 PJVKQ0ZLH3 352 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 BNIP2Q12982 314 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 CRMP1Q14194 572 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 GK2Q14410 553 aaPredicted RBP5.84□□□□□ -1.47
HDAC3-209ENST00000486618 P2RY14Q15391 338 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 PLPPR5Q32ZL2 321 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 VPS26BQ4G0F5 336 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 SPIN4Q56A73 249 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 PRR31Q5SQ13 230 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 OR52W1Q6IF63 320 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 UGT2A3Q6UWM9 527 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 APOOLQ6UXV4 268 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 LYG2Q86SG7 212 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 LAX1Q8IWV1 398 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 PUSL1Q8N0Z8 303 aaKnown RBP5.84□□□□□ -1.47
HDAC3-209ENST00000486618 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.84□□□□□ -1.47
HDAC3-209ENST00000486618 PXT1Q8NFP0 134 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 OR51D1Q8NGF3 324 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 OR1L4Q8NGR5 311 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 OR11L1Q8NGX0 322 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 GRPEL2Q8TAA5 225 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 FAM110BQ8TC76 370 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 SPRYD4Q8WW59 207 aaPredicted RBP5.84□□□□□ -1.47
HDAC3-209ENST00000486618 PFDN5Q99471 154 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 FOXB1Q99853 325 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 SLC35A5Q9BS91 424 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 LMF2Q9BU23 707 aaKnown RBP5.84□□□□□ -1.47
HDAC3-209ENST00000486618 TRMOQ9BU70 441 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 ZNF430Q9H8G1 570 aaPredicted RBP5.84□□□□□ -1.47
HDAC3-209ENST00000486618 FKRPQ9H9S5 495 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 S100A14Q9HCY8 104 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 TRIM36Q9NQ86 728 aa5.84□□□□□ -1.47
HDAC3-209ENST00000486618 RLIMQ9NVW2 624 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms