RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 CELF2-AS1Q8N7Q2 184 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 ZNF676Q8N7Q3 588 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 BOLLQ8N9W6 283 aaKnown RBP9.99□□□□□ -0.81
HPS4-214ENST00000485842 PLPP7Q8NBV4 271 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 OR11L1Q8NGX0 322 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 OR14K1Q8NGZ2 314 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 CLDND2Q8NHS1 167 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 ITPKCQ96DU7 683 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 HIST1H2AAQ96QV6 131 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 MICU1Q9BPX6 476 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 RTL8AQ9BWD3 113 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 FN3KRPQ9HA64 309 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 GPR173Q9NS66 373 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 C1orf123Q9NWV4 160 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 SCN3BQ9NY72 215 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 CLEC2DQ9UHP7 191 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 RAB26Q9ULW5 256 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 CAB39Q9Y376 341 aaPredicted RBP9.99□□□□□ -0.81
HPS4-214ENST00000485842 NPTNQ9Y639 398 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 V9GYS6 101 aa9.99□□□□□ -0.81
HPS4-214ENST00000485842 VPS13CQ709C8 3753 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 PTGES3LE9PB15 166 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 TMEM178BH3BS89 294 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 IFNL4K9M1U5 179 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 MYL12BO14950 172 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 LMX1BO60663 402 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 ZNF205O95201 554 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 LY6G6DO95868 133 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 IRF2P14316 349 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 ZNF16P17020 682 aaPredicted RBP9.98□□□□□ -0.81
HPS4-214ENST00000485842 IL2RGP31785 369 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 PMELP40967 661 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 CCR9P51686 369 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 GTF2A1P52655 376 aaPredicted RBP9.98□□□□□ -0.81
HPS4-214ENST00000485842 CSNK2BP67870 215 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 MRPL28Q13084 256 aaKnown RBP9.98□□□□□ -0.81
HPS4-214ENST00000485842 ZMYND11Q15326 602 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 TMEM244Q5VVB8 128 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 ZNF826PQ6ZT77 177 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 C1orf87Q8N0U7 546 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 HPSE2Q8WWQ2 592 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 OR5P3Q8WZ94 311 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 HPS1Q92902 700 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 RNF170Q96K19 258 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 ZNF184Q99676 751 aaPredicted RBP9.98□□□□□ -0.81
HPS4-214ENST00000485842 GAL3ST1Q99999 423 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 ABCB9Q9NP78 766 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 UBAP1Q9NZ09 502 aa9.98□□□□□ -0.81
HPS4-214ENST00000485842 TEP1Q99973 2627 aaKnown RBP9.97□□□□□ -0.81
HPS4-214ENST00000485842 OR4C45A6NMZ5 311 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 PTBP3O95758 552 aaKnown RBP9.97□□□□□ -0.81
HPS4-214ENST00000485842 NRASP01111 189 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 IGHV2-70P01814 119 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 CCDC159P0C7I6 412 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 IGHV4-31P0DP07 118 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 ZNF20P17024 532 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 C21orf33P30042 268 aaPredicted RBP9.97□□□□□ -0.81
HPS4-214ENST00000485842 CD80P33681 288 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 THBS2P35442 1172 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 GPM6AP51674 278 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 CDH15P55291 814 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 BTG1P62324 171 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 HOXA4Q00056 320 aaPredicted RBP9.97□□□□□ -0.81
HPS4-214ENST00000485842 KRTAP1-1Q07627 177 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 ZNF154Q13106 437 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 FAM201AQ5SY85 155 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 CLVS2Q5SYC1 327 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 ZBTB37Q5TC79 503 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 XAF1Q6GPH4 301 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 C19orf18Q8NEA5 215 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 OR1M1Q8NGA1 313 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 OR13C3Q8NGS6 347 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 OR10AC1Q8NH08 325 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 OR52N1Q8NH53 320 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 Q8TCH9 128 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 GATAD2BQ8WXI9 593 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 SGCDQ92629 289 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 MYDGFQ969H8 173 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 ITFG2Q969R8 447 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 ERGIC1Q969X5 290 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 PDCD1LG2Q9BQ51 273 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 FGF23Q9GZV9 251 aaPredicted RBP9.97□□□□□ -0.81
HPS4-214ENST00000485842 COMMD4Q9H0A8 199 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 Q9H521 79 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 FKBP14Q9NWM8 211 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 RNF7Q9UBF6 113 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 HHLA2Q9UM44 414 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 TPRKBQ9Y3C4 175 aa9.97□□□□□ -0.81
HPS4-214ENST00000485842 YLPM1P49750 1951 aaKnown RBP9.97□□□□□ -0.81
HPS4-214ENST00000485842 TRBV2A0A0J9YWF9 115 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 ANKRD61A6NGH8 418 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 TMEM212A6NML5 194 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 DHRS7CA6NNS2 312 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 ZNF732B4DXR9 585 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 ZFPL1O95159 310 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 LALBAP00709 142 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 CDK1P06493 297 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 HEXAP06865 529 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 ZNF12P17014 697 aa9.96□□□□□ -0.82
HPS4-214ENST00000485842 MDH2P40926 338 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms