RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 ESRP2Q9H6T0 727 aaKnown RBP9.4□□□□□ -0.9
DDX56-212ENST00000485367 MED20Q9H944 212 aa9.4□□□□□ -0.9
DDX56-212ENST00000485367 UBTD1Q9HAC8 227 aa9.4□□□□□ -0.9
DDX56-212ENST00000485367 GP6Q9HCN6 339 aa9.4□□□□□ -0.9
DDX56-212ENST00000485367 RASL12Q9NYN1 266 aa9.4□□□□□ -0.9
DDX56-212ENST00000485367 FOXJ3Q9UPW0 622 aa9.4□□□□□ -0.9
DDX56-212ENST00000485367 C2CD3Q4AC94 2353 aa9.4□□□□□ -0.9
DDX56-212ENST00000485367 FLNAP21333 2647 aaKnown RBP9.4□□□□□ -0.91
DDX56-212ENST00000485367 RFPL4AA6NLU0 287 aa9.4□□□□□ -0.91
DDX56-212ENST00000485367 RFPL4AL1F8VTS6 287 aa9.4□□□□□ -0.91
DDX56-212ENST00000485367 SULT2B1O00204 365 aa9.4□□□□□ -0.91
DDX56-212ENST00000485367 SMAD9O15198 467 aaKnown RBP9.4□□□□□ -0.91
DDX56-212ENST00000485367 DBIP07108 87 aaKnown RBP9.4□□□□□ -0.91
DDX56-212ENST00000485367 SRMP19623 302 aa9.4□□□□□ -0.91
DDX56-212ENST00000485367 ANXA7P20073 488 aaKnown RBP9.4□□□□□ -0.91
DDX56-212ENST00000485367 APOBEC1P41238 236 aaKnown RBP9.4□□□□□ -0.91
DDX56-212ENST00000485367 DIO1P49895 249 aa9.4□□□□□ -0.91
DDX56-212ENST00000485367 AKR1D1P51857 326 aa9.4□□□□□ -0.91
DDX56-212ENST00000485367 RPS11P62280 158 aaKnown RBP eCLIP9.4□□□□□ -0.91
DDX56-212ENST00000485367 SSBP1Q04837 148 aaKnown RBP9.4□□□□□ -0.91
DDX56-212ENST00000485367 RASGEF1BQ0VAM2 473 aa9.4□□□□□ -0.91
DDX56-212ENST00000485367 TEX30Q5JUR7 227 aa9.4□□□□□ -0.91
DDX56-212ENST00000485367 C17orf107Q6ZR85 190 aa9.4□□□□□ -0.91
DDX56-212ENST00000485367 TMPPEQ6ZT21 453 aa9.4□□□□□ -0.91
DDX56-212ENST00000485367 MOB3CQ70IA8 216 aa9.4□□□□□ -0.91
DDX56-212ENST00000485367 GRINAQ7Z429 371 aa9.4□□□□□ -0.91
DDX56-212ENST00000485367 WFDC8Q8IUA0 241 aa9.4□□□□□ -0.91
DDX56-212ENST00000485367 OR1M1Q8NGA1 313 aa9.4□□□□□ -0.91
DDX56-212ENST00000485367 SLC25A43Q8WUT9 341 aaPredicted RBP9.4□□□□□ -0.91
DDX56-212ENST00000485367 DNAJA3Q96EY1 480 aa9.4□□□□□ -0.91
DDX56-212ENST00000485367 HS3ST6Q96QI5 342 aa9.4□□□□□ -0.91
DDX56-212ENST00000485367 PRSS27Q9BQR3 290 aa9.4□□□□□ -0.91
DDX56-212ENST00000485367 HCAR1Q9BXC0 346 aa9.4□□□□□ -0.91
DDX56-212ENST00000485367 BCL2L14Q9BZR8 327 aa9.4□□□□□ -0.91
DDX56-212ENST00000485367 GSN-AS1Q9NRJ2 163 aa9.4□□□□□ -0.91
DDX56-212ENST00000485367 CHRNA9Q9UGM1 479 aa9.4□□□□□ -0.91
DDX56-212ENST00000485367 SIGLEC7Q9Y286 467 aa9.4□□□□□ -0.91
DDX56-212ENST00000485367 AK6Q9Y3D8 172 aaKnown RBP9.4□□□□□ -0.91
DDX56-212ENST00000485367 FXYD6-FXYD2A0A087WZ82 144 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 ZC3H12DA2A288 527 aaKnown RBP9.39□□□□□ -0.91
DDX56-212ENST00000485367 RAB19A4D1S5 217 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 POM121CA8CG34 1229 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 NUPL2O15504 423 aaKnown RBP9.39□□□□□ -0.91
DDX56-212ENST00000485367 CYTIPO60759 359 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 MELTFP08582 738 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 CSF1P09603 554 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 SELLP14151 372 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 S100PP25815 95 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 SLC16A1P53985 500 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 CSNK2A1P68400 391 aaPredicted RBP9.39□□□□□ -0.91
DDX56-212ENST00000485367 PLAURQ03405 335 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 LGALS3BPQ08380 585 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 ZNF345Q14585 488 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 MICBQ29980 383 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 LRRN1Q6UXK5 716 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 STEAP2Q8NFT2 490 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 OR6N1Q8NGY5 312 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 PMM1Q92871 262 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 S100PBPQ96BU1 408 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 PELI1Q96FA3 418 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 TMUB1Q9BVT8 246 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 MFFQ9GZY8 342 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 FXYD6Q9H0Q3 95 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 OR51V1Q9H2C8 321 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 BCO1Q9HAY6 547 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 BEX4Q9NWD9 120 aaPredicted RBP9.39□□□□□ -0.91
DDX56-212ENST00000485367 V9GY05 133 aa9.39□□□□□ -0.91
DDX56-212ENST00000485367 DSCAMO60469 2012 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 ARID1AO14497 2285 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 TRBV2A0A0J9YWF9 115 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.38□□□□□ -0.91
DDX56-212ENST00000485367 NUDT19A8MXV4 375 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 KDM4BO94953 1096 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 PLATP00750 562 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 MAKP20794 623 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 RPS4Y1P22090 263 aaKnown RBP9.38□□□□□ -0.91
DDX56-212ENST00000485367 LOXP28300 417 aaPredicted RBP9.38□□□□□ -0.91
DDX56-212ENST00000485367 H2BFSP57053 126 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 ADAM8P78325 824 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 ACKR1Q16570 336 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 BEX5Q5H9J7 111 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 FAM76BQ5HYJ3 339 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 LPCAT3Q6P1A2 487 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 ATRAIDQ6UW56 229 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 LSRQ86X29 649 aaPredicted RBP9.38□□□□□ -0.91
DDX56-212ENST00000485367 IZUMO1Q8IYV9 350 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 GABRG1Q8N1C3 465 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 SVBPQ8N300 66 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 OR13C5Q8NGS8 318 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 OR10K1Q8NGX5 313 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 CNN2Q99439 309 aaKnown RBP9.38□□□□□ -0.91
DDX56-212ENST00000485367 GINS4Q9BRT9 223 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 OR11A1Q9GZK7 315 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 SLITRK2Q9H156 845 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 OR51M1Q9H341 326 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 BARX1Q9HBU1 254 aaPredicted RBP9.38□□□□□ -0.91
DDX56-212ENST00000485367 MRPL15Q9P015 296 aaKnown RBP9.38□□□□□ -0.91
DDX56-212ENST00000485367 KLK11Q9UBX7 282 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 MLXQ9UH92 298 aa9.38□□□□□ -0.91
DDX56-212ENST00000485367 MED31Q9Y3C7 131 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms