RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 MATN1P21941 496 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 DSCR4P56555 118 aaPredicted RBP4.55□□□□□ -1.68
CCDC39-205ENST00000485055 TMEM50BP56557 158 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 KCNJ2P63252 427 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 FAM3AP98173 230 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 HMGCS1Q01581 520 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 RAB31Q13636 194 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 SPHARQ15513 63 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 RPEL1Q2QD12 228 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 VPS26BQ4G0F5 336 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 TMEM268Q5VZI3 342 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 UNQ6126/PRO20091Q6UXV3 157 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 SPNS2Q8IVW8 549 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 WDSUB1Q8N9V3 476 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 NOXO1Q8NFA2 376 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 PIGXQ8TBF5 258 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 YIPF6Q96EC8 236 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 EPYCQ99645 322 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 NMUR2Q9GZQ4 415 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 Q9H8V8 135 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 RHOFQ9HBH0 211 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 KCNJ16Q9NPI9 418 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 NANSQ9NR45 359 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 TEX10Q9NXF1 929 aaPredicted RBP4.55□□□□□ -1.68
CCDC39-205ENST00000485055 ZNF221Q9UK13 617 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 HIVEP3Q5T1R4 2406 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 PDZD2O15018 2839 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 SMG1Q96Q15 3661 aaKnown RBP4.55□□□□□ -1.68
CCDC39-205ENST00000485055 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.55□□□□□ -1.68
CCDC39-205ENST00000485055 TRGV8A0A0C4DH27 118 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 A0A0G2JMM0 328 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 hCG_38984A0A1B0GV85 526 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 EXOC1LA0A1B0GW35 172 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 A0A1W2PPB8 328 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 A0A1W2PRS3 328 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 FAM74A7A6NL05 159 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 KIR3DP1A8MWS1 328 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 UBFD1O14562 309 aaKnown RBP4.55□□□□□ -1.68
CCDC39-205ENST00000485055 TNFSF11O14788 317 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 ZIC3O60481 467 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 TMEM50AO95807 157 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 CGAP01215 116 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 GDNFP39905 211 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 CRYBB2P43320 205 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 LHX2P50458 406 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 ERVK-8P63133 956 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 MAD2L1BPQ15013 274 aaPredicted RBP4.55□□□□□ -1.68
CCDC39-205ENST00000485055 FAM74A3Q4VXF1 159 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 TIMM23BQ5SRD1 257 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 ADAM5Q6NVV9 412 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 ENPP6Q6UWR7 440 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 C17orf107Q6ZR85 190 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 LINC01561Q8N1V8 128 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 SPATA6LQ8N4H0 392 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 OR9Q2Q8NGE9 314 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 UCN3Q969E3 161 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 RPEQ96AT9 228 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 TSSK2Q96PF2 358 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 UHRF2Q96PU4 802 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 OSBPL11Q9BXB4 747 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 YIPF3Q9GZM5 350 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 ALX4Q9H161 411 aaPredicted RBP4.55□□□□□ -1.68
CCDC39-205ENST00000485055 DUSP22Q9NRW4 184 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 LAMP3Q9UQV4 416 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 ZNF780BQ9Y6R6 833 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 G3V4G9 280 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 TYROBPO43914 113 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 RAMP3O60896 148 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 CYB5R3P00387 301 aaPredicted RBP4.55□□□□□ -1.68
CCDC39-205ENST00000485055 IFNA16P05015 189 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 IGF1P05019 195 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 NBEAP1P0C6P0 100 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 PIGAP37287 484 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 P2RY1P47900 373 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 EFNB2P52799 333 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 PSG6Q00889 435 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 KRR1Q13601 381 aaKnown RBP4.55□□□□□ -1.68
CCDC39-205ENST00000485055 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.55□□□□□ -1.68
CCDC39-205ENST00000485055 MMD2Q8IY49 270 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 OR2M3Q8NG83 312 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 OR6M1Q8NGM8 313 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 OR2AE1Q8NHA4 323 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 GATAD1Q8WUU5 269 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 APH1BQ8WW43 257 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 HIST1H2ACQ93077 130 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 ADGRG7Q96K78 797 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 RNF2Q99496 336 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 TSC22D3Q99576 134 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 ATP5SQ99766 215 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 ECSITQ9BQ95 431 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 UGT2B28Q9BY64 529 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 ACTRT3Q9BYD9 372 aa4.55□□□□□ -1.68
CCDC39-205ENST00000485055 TECRQ9NZ01 308 aaKnown RBP4.55□□□□□ -1.68
CCDC39-205ENST00000485055 DOCK7Q96N67 2140 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 A0A1B0GTL3 188 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 F5H768 121 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 C19orf84I3L1E1 186 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 MLNRO43193 412 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 STATHP02808 62 aa4.54□□□□□ -1.68
CCDC39-205ENST00000485055 OCM2P0CE71 109 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms