RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ZDHHC23Q8IYP9 409 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 FGFRL1Q8N441 504 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 FTMTQ8N4E7 242 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 CBR4Q8N4T8 237 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 TEX29Q8N6K0 151 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 PLPP7Q8NBV4 271 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 OR10H4Q8NGA5 316 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 OR5P3Q8WZ94 311 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 RPL3LQ92901 407 aaKnown RBP10.23□□□□□ -0.77
MSH5-216ENST00000484309 EME1Q96AY2 570 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 RNF170Q96K19 258 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 MRI1Q9BV20 369 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 SMURF1Q9HCE7 757 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 IMPAD1Q9NX62 359 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 DUX4Q9UBX2 424 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 AASSQ9UDR5 926 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 WARS2Q9UGM6 360 aaKnown RBP10.23□□□□□ -0.77
MSH5-216ENST00000484309 NUFIP1Q9UHK0 495 aaKnown RBP10.23□□□□□ -0.77
MSH5-216ENST00000484309 MRM2Q9UI43 246 aaKnown RBP10.23□□□□□ -0.77
MSH5-216ENST00000484309 ORC6Q9Y5N6 252 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 MPC1Q9Y5U8 109 aa10.23□□□□□ -0.77
MSH5-216ENST00000484309 TRAV38-1A0A0B4J264 116 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 A0A0U1RQV5 110 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 ZNF816-ZNF321PA0A0X1KG74 233 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 P2RY10O00398 339 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 PHYHO14832 338 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 FSTL3O95633 263 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 CST4P01036 141 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 LHBP01229 141 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 TFF1P04155 84 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 HTR1FP30939 366 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 PSMB10P40306 273 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 MAP2K3P46734 347 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 ALDH3A2P51648 485 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 SCGB2A2Q13296 93 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 SNCBQ16143 134 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 KLF17Q5JT82 389 aaPredicted RBP10.22□□□□□ -0.77
MSH5-216ENST00000484309 BCL2L15Q5TBC7 163 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 BTNL3Q6UXE8 466 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 THAP5Q7Z6K1 395 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 GALNT4Q8N4A0 578 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 BPIFB2Q8N4F0 458 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.22□□□□□ -0.77
MSH5-216ENST00000484309 YIPF7Q8N8F6 280 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 SEMA6DQ8NFY4 1073 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 OR8J1Q8NGP2 316 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 ZNF418Q8TF45 676 aaPredicted RBP10.22□□□□□ -0.77
MSH5-216ENST00000484309 RAB40AQ8WXH6 277 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 MNTQ99583 582 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 NUDT16L1Q9BRJ7 211 aaKnown RBP10.22□□□□□ -0.77
MSH5-216ENST00000484309 S100A14Q9HCY8 104 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 HAO2Q9NYQ3 351 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 USE1Q9NZ43 259 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 ZNF391Q9UJN7 358 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 SLC22A13Q9Y226 551 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 PIGLQ9Y2B2 252 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 R4GMQ9 66 aa10.22□□□□□ -0.77
MSH5-216ENST00000484309 TRAV40A0A0B4J280 105 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 A0A1W2PQL4 384 aaPredicted RBP10.21□□□□□ -0.77
MSH5-216ENST00000484309 A6NIN4 97 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 ACOD1A6NK06 481 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.21□□□□□ -0.77
MSH5-216ENST00000484309 AKR7A2O43488 359 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 ENTPD6O75354 484 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 FCN3O75636 299 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 IGLV3-1P01715 115 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 KRT8P05787 483 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 IGHV4-38-2P0DP08 117 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 DCTDP32321 178 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 ATP6V1E1P36543 226 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 GPM6AP51674 278 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 PAX8Q06710 450 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 EGR3Q06889 387 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 KCNJ8Q15842 424 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 WDR38Q5JTN6 314 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 TEX36Q5VZQ5 186 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 PLCXD3Q63HM9 321 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 MOB3CQ70IA8 216 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 BCL6BQ8N143 479 aaPredicted RBP10.21□□□□□ -0.77
MSH5-216ENST00000484309 SCCPDHQ8NBX0 429 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 OR5T2Q8NGG2 359 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 DACT3Q96B18 629 aaPredicted RBP10.21□□□□□ -0.77
MSH5-216ENST00000484309 RAB3IPQ96QF0 476 aaPredicted RBP10.21□□□□□ -0.77
MSH5-216ENST00000484309 HIST1H2AAQ96QV6 131 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 MBOAT4Q96T53 435 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 CCL13Q99616 98 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 SLC29A1Q99808 456 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 WDR13Q9H1Z4 485 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 RNPEPL1Q9HAU8 725 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 SNTG1Q9NSN8 517 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 ERVK-18Q9QC07 812 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 ZNF69Q9UC07 566 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 OR52A1Q9UKL2 312 aa10.21□□□□□ -0.77
MSH5-216ENST00000484309 SOX21Q9Y651 276 aaPredicted RBP10.21□□□□□ -0.77
MSH5-216ENST00000484309 TMEM210A6NLX4 147 aa10.2□□□□□ -0.78
MSH5-216ENST00000484309 ZNF732B4DXR9 585 aa10.2□□□□□ -0.78
MSH5-216ENST00000484309 DVL1O14640 695 aa10.2□□□□□ -0.78
MSH5-216ENST00000484309 TNFRSF13BO14836 293 aaPredicted RBP10.2□□□□□ -0.78
MSH5-216ENST00000484309 TMPRSS2O15393 492 aa10.2□□□□□ -0.78
MSH5-216ENST00000484309 RHBDL1O75783 438 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms