RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 MS4A3Q96HJ5 214 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 TECTBQ96PL2 329 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 GPER1Q99527 375 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 SLX1AQ9BQ83 275 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 MARVELD1Q9BSK0 173 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 LPAR5Q9H1C0 372 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 OPA3Q9H6K4 179 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 LOC400499M0QZD8 3231 aa12.14□□□□□ -0.47
CLK3-204ENST00000483723 ZFHX4Q86UP3 3567 aa12.13□□□□□ -0.47
CLK3-204ENST00000483723 CENPXA8MT69 81 aa12.13□□□□□ -0.47
CLK3-204ENST00000483723 IL2RAP01589 272 aa12.13□□□□□ -0.47
CLK3-204ENST00000483723 CHRM2P08172 466 aa12.13□□□□□ -0.47
CLK3-204ENST00000483723 MELTFP08582 738 aa12.13□□□□□ -0.47
CLK3-204ENST00000483723 PRSS3P35030 304 aa12.13□□□□□ -0.47
CLK3-204ENST00000483723 PER3P56645 1201 aa12.13□□□□□ -0.47
CLK3-204ENST00000483723 UBE2NP61088 152 aaKnown RBP12.13□□□□□ -0.47
CLK3-204ENST00000483723 MALLQ13021 153 aa12.13□□□□□ -0.47
CLK3-204ENST00000483723 SNTB2Q13425 540 aaKnown RBP12.13□□□□□ -0.47
CLK3-204ENST00000483723 FAM189A2Q15884 450 aa12.13□□□□□ -0.47
CLK3-204ENST00000483723 C11orf91Q3C1V1 193 aa12.13□□□□□ -0.47
CLK3-204ENST00000483723 ZNF260Q3ZCT1 412 aa12.13□□□□□ -0.47
CLK3-204ENST00000483723 PLET1Q6UQ28 207 aa12.13□□□□□ -0.47
CLK3-204ENST00000483723 C1QL2Q7Z5L3 287 aa12.13□□□□□ -0.47
CLK3-204ENST00000483723 C17orf78Q8N4C9 275 aa12.13□□□□□ -0.47
CLK3-204ENST00000483723 FAM89BQ8N5H3 189 aa12.13□□□□□ -0.47
CLK3-204ENST00000483723 PNLDC1Q8NA58 520 aaKnown RBP12.13□□□□□ -0.47
CLK3-204ENST00000483723 NAXEQ8NCW5 288 aa12.13□□□□□ -0.47
CLK3-204ENST00000483723 WBP1Q96G27 269 aa12.13□□□□□ -0.47
CLK3-204ENST00000483723 SCPEP1Q9HB40 452 aa12.13□□□□□ -0.47
CLK3-204ENST00000483723 NLKQ9UBE8 527 aa12.13□□□□□ -0.47
CLK3-204ENST00000483723 ZNF835Q9Y2P0 537 aa12.13□□□□□ -0.47
CLK3-204ENST00000483723 FRYQ5TBA9 3013 aa12.12□□□□□ -0.47
CLK3-204ENST00000483723 ACACAQ13085 2346 aa12.12□□□□□ -0.47
CLK3-204ENST00000483723 NAP1L6A6NFF2 107 aa12.12□□□□□ -0.47
CLK3-204ENST00000483723 CDC14BO60729 498 aa12.12□□□□□ -0.47
CLK3-204ENST00000483723 RBBP9O75884 186 aa12.12□□□□□ -0.47
CLK3-204ENST00000483723 CST4P01036 141 aa12.12□□□□□ -0.47
CLK3-204ENST00000483723 FUT6P51993 359 aa12.12□□□□□ -0.47
CLK3-204ENST00000483723 AP3S2P59780 193 aa12.12□□□□□ -0.47
CLK3-204ENST00000483723 DMRTC1Q5HYR2 192 aa12.12□□□□□ -0.47
CLK3-204ENST00000483723 BEND4Q6ZU67 534 aa12.12□□□□□ -0.47
CLK3-204ENST00000483723 LHFPL2Q6ZUX7 228 aa12.12□□□□□ -0.47
CLK3-204ENST00000483723 ZNF101Q8IZC7 436 aa12.12□□□□□ -0.47
CLK3-204ENST00000483723 RPRMLQ8N4K4 120 aa12.12□□□□□ -0.47
CLK3-204ENST00000483723 TMEM104Q8NE00 496 aa12.12□□□□□ -0.47
CLK3-204ENST00000483723 OR5L1Q8NGL2 311 aa12.12□□□□□ -0.47
CLK3-204ENST00000483723 AQP3Q92482 292 aa12.12□□□□□ -0.47
CLK3-204ENST00000483723 SEH1LQ96EE3 360 aa12.12□□□□□ -0.47
CLK3-204ENST00000483723 HRASLSQ9HDD0 168 aa12.12□□□□□ -0.47
CLK3-204ENST00000483723 OBP2BQ9NPH6 170 aa12.12□□□□□ -0.47
CLK3-204ENST00000483723 KCNN3Q9UGI6 736 aa12.12□□□□□ -0.47
CLK3-204ENST00000483723 CELSR3Q9NYQ7 3312 aa12.12□□□□□ -0.47
CLK3-204ENST00000483723 IGKV1-27A0A075B6S5 117 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 IGKV3-15P01624 115 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 MTCP1P56278 107 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 PRSS12P56730 875 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 CXADRP78310 365 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 TBC1D28Q2M2D7 210 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 OLFML2AQ68BL7 652 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 ZNF554Q86TJ5 538 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 GLCCI1Q86VQ1 547 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 CXorf67Q86X51 503 aaPredicted RBP12.11□□□□□ -0.47
CLK3-204ENST00000483723 CSNK2A3Q8NEV1 391 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 NPRL2Q8WTW4 380 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 CPNE2Q96FN4 548 aaPredicted RBP12.11□□□□□ -0.47
CLK3-204ENST00000483723 OPN3Q9H1Y3 402 aaPredicted RBP12.11□□□□□ -0.47
CLK3-204ENST00000483723 POFUT1Q9H488 388 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 TAS2R8Q9NYW2 309 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 INTS1Q8N201 2190 aaKnown RBP12.11□□□□□ -0.47
CLK3-204ENST00000483723 A0A0A6YYD4 124 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 FAM87AP0C7U9 286 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 GLI4P10075 376 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 RBP2P50120 134 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 BTG1P62324 171 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 GUCA2AQ02747 115 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 TSC22D1Q15714 1073 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 AGAP6Q5VW22 663 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 MOB3CQ70IA8 216 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 MRPL21Q7Z2W9 205 aaKnown RBP12.11□□□□□ -0.47
CLK3-204ENST00000483723 MYPOPQ86VE0 399 aaPredicted RBP12.11□□□□□ -0.47
CLK3-204ENST00000483723 DOLPP1Q86YN1 238 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 FAM169BQ8N8A8 192 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 ACBD4Q8NC06 268 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 OR56B2PQ8NGI1 322 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 OR10R2Q8NGX6 335 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 TNFAIP8L1Q8WVP5 186 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 PIGCQ92535 297 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 CREB3L1Q96BA8 519 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 SNRNP40Q96DI7 357 aaKnown RBP12.11□□□□□ -0.47
CLK3-204ENST00000483723 SFXN3Q9BWM7 321 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 TM2D1Q9BX74 207 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 TP63Q9H3D4 680 aaPredicted RBP12.11□□□□□ -0.47
CLK3-204ENST00000483723 DPAGT1Q9H3H5 408 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 PTTG3PQ9NZH4 202 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 NPAP1Q9NZP6 1156 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 ING4Q9UNL4 249 aa12.11□□□□□ -0.47
CLK3-204ENST00000483723 FOXI3A8MTJ6 420 aaPredicted RBP12.1□□□□□ -0.47
CLK3-204ENST00000483723 MPIG6BO95866 241 aa12.1□□□□□ -0.47
CLK3-204ENST00000483723 LPLP06858 475 aa12.1□□□□□ -0.47
CLK3-204ENST00000483723 CELA3BP08861 270 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms