RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 NPRL2Q8WTW4 380 aa16.06■□□□□ 0.16
R3HDM1-215ENST00000483021 DPAGT1Q9H3H5 408 aa16.06■□□□□ 0.16
R3HDM1-215ENST00000483021 ZNF319Q9P2F9 582 aa16.06■□□□□ 0.16
R3HDM1-215ENST00000483021 TGP01266 2768 aa16.06■□□□□ 0.16
R3HDM1-215ENST00000483021 NOTCH1P46531 2555 aa16.06■□□□□ 0.16
R3HDM1-215ENST00000483021 WNK1Q9H4A3 2382 aa16.06■□□□□ 0.16
R3HDM1-215ENST00000483021 A0A1B0GW55 424 aa16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 NKX6-3A6NJ46 265 aa16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 ACOT8O14734 319 aa16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 GPR137BO60478 399 aa16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 DUX4L2P0CJ85 424 aa16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 DUX4L3P0CJ86 424 aa16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 DUX4L4P0CJ87 422 aa16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 DUX4L5P0CJ88 424 aa16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 DUX4L6P0CJ89 424 aa16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 DUX4L7P0CJ90 424 aa16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 HOXB6P17509 224 aaKnown RBP16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 IER3P46695 156 aa16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 PSMA6P60900 246 aaKnown RBP16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 GUCA2AQ02747 115 aa16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 ATPAF1Q5TC12 328 aaPredicted RBP16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 DUX4L9Q6RFH8 374 aaPredicted RBP16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 GDPGP1Q6ZNW5 385 aa16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 THEM6Q8WUY1 208 aa16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 CITED1Q99966 193 aa16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 NIPAL2Q9H841 368 aa16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 HAO2Q9NYQ3 351 aa16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 DNAJB11Q9UBS4 358 aa16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 DUX4Q9UBX2 424 aa16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 FAM96BQ9Y3D0 163 aa16.05■□□□□ 0.16
R3HDM1-215ENST00000483021 TIMM23O14925 209 aa16.04■□□□□ 0.16
R3HDM1-215ENST00000483021 CST4P01036 141 aa16.04■□□□□ 0.16
R3HDM1-215ENST00000483021 IGHV4-59P01825 116 aa16.04■□□□□ 0.16
R3HDM1-215ENST00000483021 FBP1P09467 338 aa16.04■□□□□ 0.16
R3HDM1-215ENST00000483021 TGM4P49221 684 aa16.04■□□□□ 0.16
R3HDM1-215ENST00000483021 PRDX4Q13162 271 aa16.04■□□□□ 0.16
R3HDM1-215ENST00000483021 IKZF1Q13422 519 aa16.04■□□□□ 0.16
R3HDM1-215ENST00000483021 PLBD1Q6P4A8 553 aa16.04■□□□□ 0.16
R3HDM1-215ENST00000483021 PDZD9Q8IXQ8 264 aa16.04■□□□□ 0.16
R3HDM1-215ENST00000483021 FGFRL1Q8N441 504 aa16.04■□□□□ 0.16
R3HDM1-215ENST00000483021 C8orf46Q8TAG6 207 aa16.04■□□□□ 0.16
R3HDM1-215ENST00000483021 OR5P3Q8WZ94 311 aa16.04■□□□□ 0.16
R3HDM1-215ENST00000483021 CCDC124Q96CT7 223 aaKnown RBP16.04■□□□□ 0.16
R3HDM1-215ENST00000483021 DCTN5Q9BTE1 182 aa16.04■□□□□ 0.16
R3HDM1-215ENST00000483021 CHID1Q9BWS9 393 aa16.04■□□□□ 0.16
R3HDM1-215ENST00000483021 PPP1R3EQ9H7J1 279 aa16.04■□□□□ 0.16
R3HDM1-215ENST00000483021 BTBD17A6NE02 478 aa16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 ZNF850A8MQ14 1090 aa16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 M0QZ24 198 aa16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 GNGT2O14610 69 aa16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 SELENOFO60613 162 aa16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 HMGN1P05114 100 aa16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 EEF1B2P24534 225 aaKnown RBP16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 ACKR3P25106 362 aa16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 POU1F1P28069 291 aa16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 ELF3P78545 371 aaPredicted RBP16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 GINS1Q14691 196 aa16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 SLC35D3Q5M8T2 416 aa16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 KCTD8Q6ZWB6 473 aa16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 ZDHHC23Q8IYP9 409 aa16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 ADGRG5Q8IZF4 528 aa16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 PIP4P2Q8N4L2 257 aa16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 PAPD5Q8NDF8 572 aaKnown RBP16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 ITFG2Q969R8 447 aa16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 SEH1LQ96EE3 360 aa16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 RAB3IPQ96QF0 476 aaPredicted RBP16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 CCT8L2Q96SF2 557 aa16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 PKP2Q99959 881 aa16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 ZNF556Q9HAH1 456 aa16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 PDP1Q9P0J1 537 aaPredicted RBP16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 RNF114Q9Y508 228 aa16.03■□□□□ 0.16
R3HDM1-215ENST00000483021 AMY2BP19961 511 aa16.02■□□□□ 0.16
R3HDM1-215ENST00000483021 DEFA6Q01524 100 aa16.02■□□□□ 0.16
R3HDM1-215ENST00000483021 SRSF4Q08170 494 aaKnown RBP16.02■□□□□ 0.16
R3HDM1-215ENST00000483021 FAM76BQ5HYJ3 339 aa16.02■□□□□ 0.16
R3HDM1-215ENST00000483021 H1FXQ92522 213 aaKnown RBP16.02■□□□□ 0.16
R3HDM1-215ENST00000483021 RPL3LQ92901 407 aaKnown RBP16.02■□□□□ 0.16
R3HDM1-215ENST00000483021 MED30Q96HR3 178 aa16.02■□□□□ 0.16
R3HDM1-215ENST00000483021 HIST1H2AAQ96QV6 131 aa16.02■□□□□ 0.16
R3HDM1-215ENST00000483021 TEX12Q9BXU0 123 aa16.02■□□□□ 0.16
R3HDM1-215ENST00000483021 C1orf21Q9H246 121 aa16.02■□□□□ 0.16
R3HDM1-215ENST00000483021 SIRT7Q9NRC8 400 aa16.02■□□□□ 0.16
R3HDM1-215ENST00000483021 ZNRD1Q9P1U0 126 aa16.02■□□□□ 0.16
R3HDM1-215ENST00000483021 AQP12BA6NM10 295 aa16.01■□□□□ 0.15
R3HDM1-215ENST00000483021 E2F6O75461 281 aa16.01■□□□□ 0.15
R3HDM1-215ENST00000483021 OSMP13725 252 aa16.01■□□□□ 0.15
R3HDM1-215ENST00000483021 GMFBP60983 142 aa16.01■□□□□ 0.15
R3HDM1-215ENST00000483021 PDLIM3Q53GG5 364 aaPredicted RBP16.01■□□□□ 0.15
R3HDM1-215ENST00000483021 ZNF788Q6ZQV5 615 aa16.01■□□□□ 0.15
R3HDM1-215ENST00000483021 AQP12AQ8IXF9 295 aa16.01■□□□□ 0.15
R3HDM1-215ENST00000483021 CCDC197Q8NCU1 140 aa16.01■□□□□ 0.15
R3HDM1-215ENST00000483021 OR5T2Q8NGG2 359 aa16.01■□□□□ 0.15
R3HDM1-215ENST00000483021 OR8B12Q8NGG6 310 aa16.01■□□□□ 0.15
R3HDM1-215ENST00000483021 LINC01006Q8NI28 216 aa16.01■□□□□ 0.15
R3HDM1-215ENST00000483021 FAM81AQ8TBF8 368 aa16.01■□□□□ 0.15
R3HDM1-215ENST00000483021 HPSE2Q8WWQ2 592 aa16.01■□□□□ 0.15
R3HDM1-215ENST00000483021 PIGCQ92535 297 aa16.01■□□□□ 0.15
R3HDM1-215ENST00000483021 RNF170Q96K19 258 aa16.01■□□□□ 0.15
R3HDM1-215ENST00000483021 WDR13Q9H1Z4 485 aa16.01■□□□□ 0.15
R3HDM1-215ENST00000483021 SNTG1Q9NSN8 517 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms