RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 IFITM3Q01628 133 aa2.97□□□□□ -1.93
SF3B1-210ENST00000482158 DOC2AQ14183 400 aa2.97□□□□□ -1.93
SF3B1-210ENST00000482158 C6orf99Q4VX62 202 aa2.97□□□□□ -1.93
SF3B1-210ENST00000482158 DCAKDQ8WVC6 231 aa2.97□□□□□ -1.93
SF3B1-210ENST00000482158 RCN3Q96D15 328 aa2.97□□□□□ -1.93
SF3B1-210ENST00000482158 IP6K3Q96PC2 410 aa2.97□□□□□ -1.93
SF3B1-210ENST00000482158 BLZF1Q9H2G9 400 aa2.97□□□□□ -1.93
SF3B1-210ENST00000482158 OR51B2Q9Y5P1 312 aa2.97□□□□□ -1.93
SF3B1-210ENST00000482158 KIAA1671Q9BY89 1806 aa2.97□□□□□ -1.93
SF3B1-210ENST00000482158 NEURL4Q96JN8 1562 aa2.96□□□□□ -1.94
SF3B1-210ENST00000482158 LOXHD1Q8IVV2 1947 aa2.96□□□□□ -1.94
SF3B1-210ENST00000482158 BAZ2AQ9UIF9 1905 aaKnown RBP2.96□□□□□ -1.94
SF3B1-210ENST00000482158 M0R1X1 148 aa2.96□□□□□ -1.94
SF3B1-210ENST00000482158 SRMP19623 302 aa2.96□□□□□ -1.94
SF3B1-210ENST00000482158 GABRR2P28476 465 aa2.96□□□□□ -1.94
SF3B1-210ENST00000482158 CFHR2P36980 270 aa2.96□□□□□ -1.94
SF3B1-210ENST00000482158 CLDN6P56747 220 aa2.96□□□□□ -1.94
SF3B1-210ENST00000482158 ELF3P78545 371 aaPredicted RBP2.96□□□□□ -1.94
SF3B1-210ENST00000482158 LCN2P80188 198 aa2.96□□□□□ -1.94
SF3B1-210ENST00000482158 TPRG1LQ5T0D9 272 aa2.96□□□□□ -1.94
SF3B1-210ENST00000482158 TTC19Q6DKK2 380 aaPredicted RBP2.96□□□□□ -1.94
SF3B1-210ENST00000482158 TMPRSS11AQ6ZMR5 421 aa2.96□□□□□ -1.94
SF3B1-210ENST00000482158 SUN5Q8TC36 379 aa2.96□□□□□ -1.94
SF3B1-210ENST00000482158 CDS1Q92903 461 aa2.96□□□□□ -1.94
SF3B1-210ENST00000482158 ZFP3Q96NJ6 502 aa2.96□□□□□ -1.94
SF3B1-210ENST00000482158 CYP3A43Q9HB55 503 aa2.96□□□□□ -1.94
SF3B1-210ENST00000482158 RPRD1BQ9NQG5 326 aaKnown RBP2.96□□□□□ -1.94
SF3B1-210ENST00000482158 SIGLEC7Q9Y286 467 aa2.96□□□□□ -1.94
SF3B1-210ENST00000482158 LRRC42Q9Y546 428 aa2.96□□□□□ -1.94
SF3B1-210ENST00000482158 ZCCHC6Q5VYS8 1495 aaKnown RBP2.96□□□□□ -1.94
SF3B1-210ENST00000482158 IGKV1D-17A0A075B6S4 117 aa2.95□□□□□ -1.94
SF3B1-210ENST00000482158 IGHV3OR16-8A0A075B7F1 116 aa2.95□□□□□ -1.94
SF3B1-210ENST00000482158 MANBAO00462 879 aa2.95□□□□□ -1.94
SF3B1-210ENST00000482158 CHMP2AO43633 222 aa2.95□□□□□ -1.94
SF3B1-210ENST00000482158 HSBP1O75506 76 aa2.95□□□□□ -1.94
SF3B1-210ENST00000482158 LHBP01229 141 aa2.95□□□□□ -1.94
SF3B1-210ENST00000482158 IGKV1-17P01599 117 aa2.95□□□□□ -1.94
SF3B1-210ENST00000482158 CXCR1P25024 350 aa2.95□□□□□ -1.94
SF3B1-210ENST00000482158 PCK1P35558 622 aa2.95□□□□□ -1.94
SF3B1-210ENST00000482158 TAS2R39P59534 338 aa2.95□□□□□ -1.94
SF3B1-210ENST00000482158 KDSRQ06136 332 aa2.95□□□□□ -1.94
SF3B1-210ENST00000482158 NAB1Q13506 487 aa2.95□□□□□ -1.94
SF3B1-210ENST00000482158 DMC1Q14565 340 aa2.95□□□□□ -1.94
SF3B1-210ENST00000482158 STEAP4Q687X5 459 aa2.95□□□□□ -1.94
SF3B1-210ENST00000482158 ERO1BQ86YB8 467 aa2.95□□□□□ -1.94
SF3B1-210ENST00000482158 DAW1Q8N136 415 aa2.95□□□□□ -1.94
SF3B1-210ENST00000482158 ENKURQ8TC29 256 aa2.95□□□□□ -1.94
SF3B1-210ENST00000482158 PIH1D2Q8WWB5 315 aa2.95□□□□□ -1.94
SF3B1-210ENST00000482158 RXFP2Q8WXD0 754 aa2.95□□□□□ -1.94
SF3B1-210ENST00000482158 WDR34Q96EX3 536 aa2.95□□□□□ -1.94
SF3B1-210ENST00000482158 EMC6Q9BV81 110 aa2.95□□□□□ -1.94
SF3B1-210ENST00000482158 BRD4O60885 1362 aaPredicted RBP2.95□□□□□ -1.94
SF3B1-210ENST00000482158 ZNF608Q9ULD9 1512 aaPredicted RBP2.94□□□□□ -1.94
SF3B1-210ENST00000482158 C16orf90A8MZG2 172 aa2.94□□□□□ -1.94
SF3B1-210ENST00000482158 HACD1B0YJ81 288 aa2.94□□□□□ -1.94
SF3B1-210ENST00000482158 POLR1CO15160 346 aaPredicted RBP2.94□□□□□ -1.94
SF3B1-210ENST00000482158 PSPHP1O15172 72 aa2.94□□□□□ -1.94
SF3B1-210ENST00000482158 POLR3GO15318 223 aaPredicted RBP2.94□□□□□ -1.94
SF3B1-210ENST00000482158 KLK1P06870 262 aa2.94□□□□□ -1.94
SF3B1-210ENST00000482158 PMCHP20382 165 aa2.94□□□□□ -1.94
SF3B1-210ENST00000482158 NTF3P20783 257 aa2.94□□□□□ -1.94
SF3B1-210ENST00000482158 PSMB5P28074 263 aa2.94□□□□□ -1.94
SF3B1-210ENST00000482158 APLNRP35414 380 aa2.94□□□□□ -1.94
SF3B1-210ENST00000482158 ETV1P50549 477 aa2.94□□□□□ -1.94
SF3B1-210ENST00000482158 RPL18AQ02543 176 aaKnown RBP2.94□□□□□ -1.94
SF3B1-210ENST00000482158 FUT5Q11128 374 aa2.94□□□□□ -1.94
SF3B1-210ENST00000482158 LUZP6Q538Z0 58 aa2.94□□□□□ -1.94
SF3B1-210ENST00000482158 KPRPQ5T749 579 aaPredicted RBP2.94□□□□□ -1.94
SF3B1-210ENST00000482158 WDR31Q8NA23 367 aa2.94□□□□□ -1.94
SF3B1-210ENST00000482158 SPERTQ8NA61 448 aa2.94□□□□□ -1.94
SF3B1-210ENST00000482158 BAALCQ8WXS3 180 aa2.94□□□□□ -1.94
SF3B1-210ENST00000482158 TOP1MTQ969P6 601 aa2.94□□□□□ -1.94
SF3B1-210ENST00000482158 KIAA1143Q96AT1 154 aaPredicted RBP2.94□□□□□ -1.94
SF3B1-210ENST00000482158 S100PBPQ96BU1 408 aa2.94□□□□□ -1.94
SF3B1-210ENST00000482158 RDH12Q96NR8 316 aa2.94□□□□□ -1.94
SF3B1-210ENST00000482158 SFXN3Q9BWM7 321 aa2.94□□□□□ -1.94
SF3B1-210ENST00000482158 RGCCQ9H4X1 137 aa2.94□□□□□ -1.94
SF3B1-210ENST00000482158 DHX35Q9H5Z1 703 aaKnown RBP2.94□□□□□ -1.94
SF3B1-210ENST00000482158 CES1P1Q9UKY3 287 aa2.94□□□□□ -1.94
SF3B1-210ENST00000482158 MROH5Q6ZUA9 1318 aa2.93□□□□□ -1.94
SF3B1-210ENST00000482158 RPN2P04844 631 aa2.93□□□□□ -1.94
SF3B1-210ENST00000482158 PRKACBP22694 351 aa2.93□□□□□ -1.94
SF3B1-210ENST00000482158 YWHAEP62258 255 aaKnown RBP2.93□□□□□ -1.94
SF3B1-210ENST00000482158 PAFAH1B2P68402 229 aa2.93□□□□□ -1.94
SF3B1-210ENST00000482158 SYCP1Q15431 976 aa2.93□□□□□ -1.94
SF3B1-210ENST00000482158 HADHQ16836 314 aaKnown RBP2.93□□□□□ -1.94
SF3B1-210ENST00000482158 CCDC122Q5T0U0 273 aa2.93□□□□□ -1.94
SF3B1-210ENST00000482158 MFSD14CQ5VZR4 134 aa2.93□□□□□ -1.94
SF3B1-210ENST00000482158 ULK3Q6PHR2 472 aa2.93□□□□□ -1.94
SF3B1-210ENST00000482158 NDUFAF7Q7L592 441 aa2.93□□□□□ -1.94
SF3B1-210ENST00000482158 SLC30A8Q8IWU4 369 aa2.93□□□□□ -1.94
SF3B1-210ENST00000482158 STK40Q8N2I9 435 aa2.93□□□□□ -1.94
SF3B1-210ENST00000482158 PDCL2Q8N4E4 241 aa2.93□□□□□ -1.94
SF3B1-210ENST00000482158 KLF14Q8TD94 323 aaPredicted RBP2.93□□□□□ -1.94
SF3B1-210ENST00000482158 IL22Q9GZX6 179 aa2.93□□□□□ -1.94
SF3B1-210ENST00000482158 LINC00574Q9H8X3 128 aa2.93□□□□□ -1.94
SF3B1-210ENST00000482158 HEBP1Q9NRV9 189 aa2.93□□□□□ -1.94
SF3B1-210ENST00000482158 CHTOPQ9Y3Y2 248 aaKnown RBP2.93□□□□□ -1.94
SF3B1-210ENST00000482158 SVILO95425 2214 aa2.93□□□□□ -1.94
SF3B1-210ENST00000482158 RNF113AO15541 343 aaKnown RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms