RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 CNTD2Q9H8S5 307 aa15.31■□□□□ 0.04
CLK1-211ENST00000481641 ZNF556Q9HAH1 456 aa15.31■□□□□ 0.04
CLK1-211ENST00000481641 ACOXLQ9NUZ1 547 aa15.31■□□□□ 0.04
CLK1-211ENST00000481641 LRP12Q9Y561 859 aa15.31■□□□□ 0.04
CLK1-211ENST00000481641 MEGF8Q7Z7M0 2845 aa15.31■□□□□ 0.04
CLK1-211ENST00000481641 A0A0U1RQK1 487 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 ANXA2P2A6NMY6 339 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 POM121CA8CG34 1229 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 PSMD9O00233 223 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 PRODHO43272 600 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 FKBP6O75344 327 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 ECDO95905 644 aaPredicted RBP15.3■□□□□ 0.04
CLK1-211ENST00000481641 SLC2A5P22732 501 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 DLX1P56177 255 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 CBX1P83916 185 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 RELBQ01201 579 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 IL5RAQ01344 420 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 APOFQ13790 326 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 PDCD1Q15116 288 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 DMRTC1Q5HYR2 192 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 KCTD8Q6ZWB6 473 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 VMO1Q7Z5L0 202 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 KIR3DL3Q8N743 410 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 SCCPDHQ8NBX0 429 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 OR5P3Q8WZ94 311 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 RNF170Q96K19 258 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 FAM71F1Q96KD3 344 aaPredicted RBP15.3■□□□□ 0.04
CLK1-211ENST00000481641 PKP2Q99959 881 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 RTL8AQ9BWD3 113 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 RGCCQ9H4X1 137 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 ONECUT1Q9UBC0 465 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 DNAJB11Q9UBS4 358 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 MPC1Q9Y5U8 109 aa15.3■□□□□ 0.04
CLK1-211ENST00000481641 AKR7A2O43488 359 aa15.29■□□□□ 0.04
CLK1-211ENST00000481641 CST4P01036 141 aa15.29■□□□□ 0.04
CLK1-211ENST00000481641 MRPL3P09001 348 aaKnown RBP15.29■□□□□ 0.04
CLK1-211ENST00000481641 ANXA8P13928 327 aa15.29■□□□□ 0.04
CLK1-211ENST00000481641 ALOX5APP20292 161 aa15.29■□□□□ 0.04
CLK1-211ENST00000481641 PSMA6P60900 246 aaKnown RBP15.29■□□□□ 0.04
CLK1-211ENST00000481641 FLOT2Q14254 428 aa15.29■□□□□ 0.04
CLK1-211ENST00000481641 STUMQ69YW2 141 aa15.29■□□□□ 0.04
CLK1-211ENST00000481641 SLC36A1Q7Z2H8 476 aa15.29■□□□□ 0.04
CLK1-211ENST00000481641 KRT77Q7Z794 578 aa15.29■□□□□ 0.04
CLK1-211ENST00000481641 LY6G5BQ8NDX9 201 aa15.29■□□□□ 0.04
CLK1-211ENST00000481641 HPSE2Q8WWQ2 592 aa15.29■□□□□ 0.04
CLK1-211ENST00000481641 TTTY10Q9BZA0 68 aa15.29■□□□□ 0.04
CLK1-211ENST00000481641 HAO2Q9NYQ3 351 aa15.29■□□□□ 0.04
CLK1-211ENST00000481641 TVP23BQ9NYZ1 205 aa15.29■□□□□ 0.04
CLK1-211ENST00000481641 C1RLQ9NZP8 487 aa15.29■□□□□ 0.04
CLK1-211ENST00000481641 LAMP5Q9UJQ1 280 aa15.29■□□□□ 0.04
CLK1-211ENST00000481641 PRR32B1ATL7 298 aa15.28■□□□□ 0.04
CLK1-211ENST00000481641 GYG2O15488 501 aa15.28■□□□□ 0.04
CLK1-211ENST00000481641 NDUFB3O43676 98 aa15.28■□□□□ 0.04
CLK1-211ENST00000481641 IGHV4-59P01825 116 aa15.28■□□□□ 0.04
CLK1-211ENST00000481641 CRYBA1P05813 215 aa15.28■□□□□ 0.04
CLK1-211ENST00000481641 TGM4P49221 684 aa15.28■□□□□ 0.04
CLK1-211ENST00000481641 RAG2P55895 527 aa15.28■□□□□ 0.04
CLK1-211ENST00000481641 SNAPC1Q16533 368 aa15.28■□□□□ 0.04
CLK1-211ENST00000481641 CDONQ4KMG0 1287 aa15.28■□□□□ 0.04
CLK1-211ENST00000481641 SLC35D3Q5M8T2 416 aa15.28■□□□□ 0.04
CLK1-211ENST00000481641 TRPM8Q7Z2W7 1104 aa15.28■□□□□ 0.04
CLK1-211ENST00000481641 FTMTQ8N4E7 242 aa15.28■□□□□ 0.04
CLK1-211ENST00000481641 PIP4P2Q8N4L2 257 aa15.28■□□□□ 0.04
CLK1-211ENST00000481641 PPP1R14AQ96A00 147 aa15.28■□□□□ 0.04
CLK1-211ENST00000481641 RAB3IPQ96QF0 476 aaPredicted RBP15.28■□□□□ 0.04
CLK1-211ENST00000481641 SEMA6AQ9H2E6 1030 aa15.28■□□□□ 0.04
CLK1-211ENST00000481641 SLC25A19Q9HC21 320 aa15.28■□□□□ 0.04
CLK1-211ENST00000481641 SIRT7Q9NRC8 400 aa15.28■□□□□ 0.04
CLK1-211ENST00000481641 DNAJB9Q9UBS3 223 aa15.28■□□□□ 0.04
CLK1-211ENST00000481641 ZNF391Q9UJN7 358 aa15.28■□□□□ 0.04
CLK1-211ENST00000481641 MMP24Q9Y5R2 645 aa15.28■□□□□ 0.04
CLK1-211ENST00000481641 KPTNQ9Y664 436 aa15.28■□□□□ 0.04
CLK1-211ENST00000481641 A0A1W2PRD5 423 aa15.27■□□□□ 0.04
CLK1-211ENST00000481641 A0A1W2PRF3 423 aa15.27■□□□□ 0.04
CLK1-211ENST00000481641 A0A1W2PRM7 423 aa15.27■□□□□ 0.04
CLK1-211ENST00000481641 TCRBV3S1A0A5B6 114 aa15.27■□□□□ 0.04
CLK1-211ENST00000481641 CCDC182A6NF36 153 aa15.27■□□□□ 0.04
CLK1-211ENST00000481641 KCNAB3O43448 404 aa15.27■□□□□ 0.04
CLK1-211ENST00000481641 GPM6AP51674 278 aa15.27■□□□□ 0.04
CLK1-211ENST00000481641 SNCBQ16143 134 aa15.27■□□□□ 0.04
CLK1-211ENST00000481641 CEP78Q5JTW2 689 aa15.27■□□□□ 0.04
CLK1-211ENST00000481641 ZDHHC23Q8IYP9 409 aa15.27■□□□□ 0.04
CLK1-211ENST00000481641 TMEM86BQ8N661 226 aa15.27■□□□□ 0.04
CLK1-211ENST00000481641 OR10Z1Q8NGY1 313 aa15.27■□□□□ 0.04
CLK1-211ENST00000481641 SSMEM1Q8WWF3 244 aa15.27■□□□□ 0.04
CLK1-211ENST00000481641 H1FXQ92522 213 aaKnown RBP15.27■□□□□ 0.04
CLK1-211ENST00000481641 C12orf43Q96C57 262 aaKnown RBP15.27■□□□□ 0.04
CLK1-211ENST00000481641 SLC7A6OSQ96CW6 309 aaPredicted RBP15.27■□□□□ 0.04
CLK1-211ENST00000481641 GAFA1Q96PS6 74 aa15.27■□□□□ 0.04
CLK1-211ENST00000481641 DCTN5Q9BTE1 182 aa15.27■□□□□ 0.04
CLK1-211ENST00000481641 SLITRK2Q9H156 845 aa15.27■□□□□ 0.04
CLK1-211ENST00000481641 COPS3Q9UNS2 423 aa15.27■□□□□ 0.04
CLK1-211ENST00000481641 POMPQ9Y244 141 aa15.27■□□□□ 0.04
CLK1-211ENST00000481641 CMYA5Q8N3K9 4069 aa15.27■□□□□ 0.03
CLK1-211ENST00000481641 TMEM210A6NLX4 147 aa15.26■□□□□ 0.03
CLK1-211ENST00000481641 RHBDL1O75783 438 aa15.26■□□□□ 0.03
CLK1-211ENST00000481641 KNG1P01042 644 aa15.26■□□□□ 0.03
CLK1-211ENST00000481641 DCTDP32321 178 aa15.26■□□□□ 0.03
CLK1-211ENST00000481641 CRISP1P54107 249 aa15.26■□□□□ 0.03
CLK1-211ENST00000481641 KLRD1Q13241 179 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms