RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ZNF850A8MQ14 1090 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 PRR23D1E9PI22 279 aaPredicted RBP12.58□□□□□ -0.4
LIMS3-203ENST00000480744 NDUFB3O43676 98 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 SELENOFO60613 162 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 ATP5HO75947 161 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 IGHV4-59P01825 116 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 LYNP07948 512 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 PRR23D2P0DMB1 279 aaPredicted RBP12.58□□□□□ -0.4
LIMS3-203ENST00000480744 RELBQ01201 579 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 IL5RAQ01344 420 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 PRDX4Q13162 271 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 GINS1Q14691 196 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 SNCBQ16143 134 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 OLFML2AQ68BL7 652 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 KCTD8Q6ZWB6 473 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 AQP12AQ8IXF9 295 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 FTMTQ8N4E7 242 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 OR5T2Q8NGG2 359 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 WFDC12Q8WWY7 111 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 RTL8AQ9BWD3 113 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 CHID1Q9BWS9 393 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 SNTG1Q9NSN8 517 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 PDP1Q9P0J1 537 aaPredicted RBP12.58□□□□□ -0.4
LIMS3-203ENST00000480744 DNAJB11Q9UBS4 358 aa12.58□□□□□ -0.4
LIMS3-203ENST00000480744 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.57□□□□□ -0.4
LIMS3-203ENST00000480744 NDUFA7O95182 113 aa12.57□□□□□ -0.4
LIMS3-203ENST00000480744 RPS7P62081 194 aaKnown RBP12.57□□□□□ -0.4
LIMS3-203ENST00000480744 PRB3Q04118 309 aaPredicted RBP12.57□□□□□ -0.4
LIMS3-203ENST00000480744 GK3PQ14409 553 aa12.57□□□□□ -0.4
LIMS3-203ENST00000480744 C11orf91Q3C1V1 193 aa12.57□□□□□ -0.4
LIMS3-203ENST00000480744 CDONQ4KMG0 1287 aa12.57□□□□□ -0.4
LIMS3-203ENST00000480744 BRICD5Q6PL45 260 aa12.57□□□□□ -0.4
LIMS3-203ENST00000480744 TMEM179BQ7Z7N9 219 aa12.57□□□□□ -0.4
LIMS3-203ENST00000480744 SPATA24Q86W54 205 aa12.57□□□□□ -0.4
LIMS3-203ENST00000480744 GALNT4Q8N4A0 578 aa12.57□□□□□ -0.4
LIMS3-203ENST00000480744 OTOSQ8NHW6 89 aa12.57□□□□□ -0.4
LIMS3-203ENST00000480744 H1FXQ92522 213 aaKnown RBP12.57□□□□□ -0.4
LIMS3-203ENST00000480744 PIGCQ92535 297 aa12.57□□□□□ -0.4
LIMS3-203ENST00000480744 RPL3LQ92901 407 aaKnown RBP12.57□□□□□ -0.4
LIMS3-203ENST00000480744 ITPKCQ96DU7 683 aa12.57□□□□□ -0.4
LIMS3-203ENST00000480744 RGCCQ9H4X1 137 aa12.57□□□□□ -0.4
LIMS3-203ENST00000480744 SIRT7Q9NRC8 400 aa12.57□□□□□ -0.4
LIMS3-203ENST00000480744 FAM96BQ9Y3D0 163 aa12.57□□□□□ -0.4
LIMS3-203ENST00000480744 MPC1Q9Y5U8 109 aa12.57□□□□□ -0.4
LIMS3-203ENST00000480744 KPTNQ9Y664 436 aa12.57□□□□□ -0.4
LIMS3-203ENST00000480744 A0A1B0GVI7 797 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 CLPSL1A2RUU4 121 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 ARRDC5A6NEK1 342 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 NKX6-3A6NJ46 265 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 GPR137BO60478 399 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 E2F6O75461 281 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 SELLP14151 372 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 ACKR3P25106 362 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 RASSF2P50749 326 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 LRRC10Q5BKY1 277 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 RHOUQ7L0Q8 258 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 CPOQ8IVL8 374 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 CMTM4Q8IZR5 234 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 ZNF454Q8N9F8 522 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 DYRK2Q92630 601 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 RNF170Q96K19 258 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 PKP2Q99959 881 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 TLNRD1Q9H1K6 362 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 WDR13Q9H1Z4 485 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 SEMA6AQ9H2E6 1030 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 ZNF556Q9HAH1 456 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 HAO2Q9NYQ3 351 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.56□□□□□ -0.4
LIMS3-203ENST00000480744 KLHDC2Q9Y2U9 406 aa12.56□□□□□ -0.4
LIMS3-203ENST00000480744 A0A1W2PRD5 423 aa12.55□□□□□ -0.4
LIMS3-203ENST00000480744 A0A1W2PRF3 423 aa12.55□□□□□ -0.4
LIMS3-203ENST00000480744 A0A1W2PRM7 423 aa12.55□□□□□ -0.4
LIMS3-203ENST00000480744 AKR7A2O43488 359 aa12.55□□□□□ -0.4
LIMS3-203ENST00000480744 TFF1P04155 84 aa12.55□□□□□ -0.4
LIMS3-203ENST00000480744 HMGN1P05114 100 aa12.55□□□□□ -0.4
LIMS3-203ENST00000480744 IER3P46695 156 aa12.55□□□□□ -0.4
LIMS3-203ENST00000480744 DLX1P56177 255 aa12.55□□□□□ -0.4
LIMS3-203ENST00000480744 PSMA6P60900 246 aaKnown RBP12.55□□□□□ -0.4
LIMS3-203ENST00000480744 STUMQ69YW2 141 aa12.55□□□□□ -0.4
LIMS3-203ENST00000480744 CCDC121Q6ZUS5 278 aa12.55□□□□□ -0.4
LIMS3-203ENST00000480744 KRT77Q7Z794 578 aa12.55□□□□□ -0.4
LIMS3-203ENST00000480744 HS3ST5Q8IZT8 346 aa12.55□□□□□ -0.4
LIMS3-203ENST00000480744 PIP4P2Q8N4L2 257 aa12.55□□□□□ -0.4
LIMS3-203ENST00000480744 LY6G5BQ8NDX9 201 aa12.55□□□□□ -0.4
LIMS3-203ENST00000480744 BBS1Q8NFJ9 593 aa12.55□□□□□ -0.4
LIMS3-203ENST00000480744 OR8B12Q8NGG6 310 aa12.55□□□□□ -0.4
LIMS3-203ENST00000480744 FAM81AQ8TBF8 368 aa12.55□□□□□ -0.4
LIMS3-203ENST00000480744 OR5P3Q8WZ94 311 aa12.55□□□□□ -0.4
LIMS3-203ENST00000480744 C12orf43Q96C57 262 aaKnown RBP12.55□□□□□ -0.4
LIMS3-203ENST00000480744 LYZL4Q96KX0 146 aa12.55□□□□□ -0.4
LIMS3-203ENST00000480744 HIST1H2AAQ96QV6 131 aa12.55□□□□□ -0.4
LIMS3-203ENST00000480744 ABCB9Q9NP78 766 aa12.55□□□□□ -0.4
LIMS3-203ENST00000480744 ZNF391Q9UJN7 358 aa12.55□□□□□ -0.4
LIMS3-203ENST00000480744 TMEM210A6NLX4 147 aa12.54□□□□□ -0.4
LIMS3-203ENST00000480744 PRODHO43272 600 aa12.54□□□□□ -0.4
LIMS3-203ENST00000480744 FKBP6O75344 327 aa12.54□□□□□ -0.4
LIMS3-203ENST00000480744 CST4P01036 141 aa12.54□□□□□ -0.4
LIMS3-203ENST00000480744 OSMP13725 252 aa12.54□□□□□ -0.4
LIMS3-203ENST00000480744 AMY2BP19961 511 aa12.54□□□□□ -0.4
LIMS3-203ENST00000480744 EEF1B2P24534 225 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms