RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 OR5P3Q8WZ94 311 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 PIGCQ92535 297 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 CCL17Q92583 94 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 DVL3Q92997 716 aaPredicted RBP16.68■□□□□ 0.26
LIME1-205ENST00000480139 MICU1Q9BPX6 476 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 TMUB1Q9BVT8 246 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 RTL8AQ9BWD3 113 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 REG4Q9BYZ8 158 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 COMMD4Q9H0A8 199 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 PLEKHA1Q9HB21 404 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 HHLA2Q9UM44 414 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 CACNG2Q9Y698 323 aa16.68■□□□□ 0.26
LIME1-205ENST00000480139 A0A096LNT2 108 aa16.67■□□□□ 0.26
LIME1-205ENST00000480139 TRBV2A0A0J9YWF9 115 aa16.67■□□□□ 0.26
LIME1-205ENST00000480139 LOC100289279A0A1B0GTE1 492 aa16.67■□□□□ 0.26
LIME1-205ENST00000480139 CLDN25C9JDP6 229 aa16.67■□□□□ 0.26
LIME1-205ENST00000480139 GTF2A1P52655 376 aaPredicted RBP16.67■□□□□ 0.26
LIME1-205ENST00000480139 GABARAPL2P60520 117 aa16.67■□□□□ 0.26
LIME1-205ENST00000480139 IRF3Q14653 427 aa16.67■□□□□ 0.26
LIME1-205ENST00000480139 CLVS2Q5SYC1 327 aa16.67■□□□□ 0.26
LIME1-205ENST00000480139 XAF1Q6GPH4 301 aa16.67■□□□□ 0.26
LIME1-205ENST00000480139 PRSS48Q7RTY5 328 aa16.67■□□□□ 0.26
LIME1-205ENST00000480139 RDH10Q8IZV5 341 aa16.67■□□□□ 0.26
LIME1-205ENST00000480139 OR5AK2Q8NH90 309 aa16.67■□□□□ 0.26
LIME1-205ENST00000480139 SGCDQ92629 289 aa16.67■□□□□ 0.26
LIME1-205ENST00000480139 SMIM19Q96E16 107 aa16.67■□□□□ 0.26
LIME1-205ENST00000480139 COX4I2Q96KJ9 171 aa16.67■□□□□ 0.26
LIME1-205ENST00000480139 YTHDF1Q9BYJ9 559 aaKnown RBP16.67■□□□□ 0.26
LIME1-205ENST00000480139 BPESC1Q9GZL8 116 aa16.67■□□□□ 0.26
LIME1-205ENST00000480139 TMEM106BQ9NUM4 274 aa16.67■□□□□ 0.26
LIME1-205ENST00000480139 ERVK-18Q9QC07 812 aa16.67■□□□□ 0.26
LIME1-205ENST00000480139 TMEM210A6NLX4 147 aa16.66■□□□□ 0.26
LIME1-205ENST00000480139 LALBAP00709 142 aa16.66■□□□□ 0.26
LIME1-205ENST00000480139 FOSL1P15407 271 aa16.66■□□□□ 0.26
LIME1-205ENST00000480139 GPR6P46095 362 aaPredicted RBP16.66■□□□□ 0.26
LIME1-205ENST00000480139 BDH1Q02338 343 aa16.66■□□□□ 0.26
LIME1-205ENST00000480139 LOXL1Q08397 574 aaPredicted RBP16.66■□□□□ 0.26
LIME1-205ENST00000480139 ACSM1Q08AH1 577 aa16.66■□□□□ 0.26
LIME1-205ENST00000480139 CEACAM21Q3KPI0 293 aa16.66■□□□□ 0.26
LIME1-205ENST00000480139 FAM76BQ5HYJ3 339 aa16.66■□□□□ 0.26
LIME1-205ENST00000480139 HPSE2Q8WWQ2 592 aa16.66■□□□□ 0.26
LIME1-205ENST00000480139 PP6455Q8WZ26 134 aa16.66■□□□□ 0.26
LIME1-205ENST00000480139 HPS1Q92902 700 aa16.66■□□□□ 0.26
LIME1-205ENST00000480139 HIST1H2AAQ96QV6 131 aa16.66■□□□□ 0.26
LIME1-205ENST00000480139 TLNRD1Q9H1K6 362 aa16.66■□□□□ 0.26
LIME1-205ENST00000480139 PPP1R3EQ9H7J1 279 aa16.66■□□□□ 0.26
LIME1-205ENST00000480139 FN3KRPQ9HA64 309 aa16.66■□□□□ 0.26
LIME1-205ENST00000480139 LSM2Q9Y333 95 aaKnown RBP16.66■□□□□ 0.26
LIME1-205ENST00000480139 HIVEP1P15822 2718 aa16.66■□□□□ 0.26
LIME1-205ENST00000480139 OR5B21A6NL26 309 aa16.65■□□□□ 0.26
LIME1-205ENST00000480139 LRRC30A6NM36 301 aa16.65■□□□□ 0.26
LIME1-205ENST00000480139 RNF223E7ERA6 249 aa16.65■□□□□ 0.26
LIME1-205ENST00000480139 H7C1Q1 480 aa16.65■□□□□ 0.26
LIME1-205ENST00000480139 PPIHO43447 177 aaKnown RBP16.65■□□□□ 0.26
LIME1-205ENST00000480139 MRPS14O60783 128 aaKnown RBP16.65■□□□□ 0.26
LIME1-205ENST00000480139 NRASP01111 189 aa16.65■□□□□ 0.26
LIME1-205ENST00000480139 PRAMEF6Q5VXH4 476 aa16.65■□□□□ 0.26
LIME1-205ENST00000480139 DMKNQ6E0U4 476 aaPredicted RBP16.65■□□□□ 0.26
LIME1-205ENST00000480139 WDR86Q86TI4 376 aa16.65■□□□□ 0.26
LIME1-205ENST00000480139 MOGAT3Q86VF5 341 aa16.65■□□□□ 0.26
LIME1-205ENST00000480139 OR5A2Q8NGI9 324 aa16.65■□□□□ 0.26
LIME1-205ENST00000480139 TIMD4Q96H15 378 aa16.65■□□□□ 0.26
LIME1-205ENST00000480139 C18orf12Q96KH6 178 aa16.65■□□□□ 0.26
LIME1-205ENST00000480139 TECTBQ96PL2 329 aa16.65■□□□□ 0.26
LIME1-205ENST00000480139 PDCD1LG2Q9BQ51 273 aa16.65■□□□□ 0.26
LIME1-205ENST00000480139 CHST5Q9GZS9 411 aa16.65■□□□□ 0.26
LIME1-205ENST00000480139 ZNF469Q96JG9 3925 aaPredicted RBP16.64■□□□□ 0.25
LIME1-205ENST00000480139 CR1P17927 2039 aa16.64■□□□□ 0.25
LIME1-205ENST00000480139 ANKRD61A6NGH8 418 aa16.64■□□□□ 0.25
LIME1-205ENST00000480139 TMEM178BH3BS89 294 aa16.64■□□□□ 0.25
LIME1-205ENST00000480139 FSTL3O95633 263 aa16.64■□□□□ 0.25
LIME1-205ENST00000480139 MT-ND2P03891 347 aa16.64■□□□□ 0.25
LIME1-205ENST00000480139 CD1AP06126 327 aa16.64■□□□□ 0.25
LIME1-205ENST00000480139 CD99P14209 185 aa16.64■□□□□ 0.25
LIME1-205ENST00000480139 USF1P22415 310 aaPredicted RBP16.64■□□□□ 0.25
LIME1-205ENST00000480139 ZNF154Q13106 437 aa16.64■□□□□ 0.25
LIME1-205ENST00000480139 MPPED2Q15777 294 aa16.64■□□□□ 0.25
LIME1-205ENST00000480139 PLCXD3Q63HM9 321 aa16.64■□□□□ 0.25
LIME1-205ENST00000480139 PEG10Q86TG7 708 aaKnown RBP16.64■□□□□ 0.25
LIME1-205ENST00000480139 C1orf87Q8N0U7 546 aa16.64■□□□□ 0.25
LIME1-205ENST00000480139 CIARTQ8N365 385 aaPredicted RBP16.64■□□□□ 0.25
LIME1-205ENST00000480139 OR1M1Q8NGA1 313 aa16.64■□□□□ 0.25
LIME1-205ENST00000480139 OR11L1Q8NGX0 322 aa16.64■□□□□ 0.25
LIME1-205ENST00000480139 OR10AC1Q8NH08 325 aa16.64■□□□□ 0.25
LIME1-205ENST00000480139 RAB1CQ92928 201 aa16.64■□□□□ 0.25
LIME1-205ENST00000480139 TREM2Q9NZC2 230 aa16.64■□□□□ 0.25
LIME1-205ENST00000480139 SIRT4Q9Y6E7 314 aaPredicted RBP16.64■□□□□ 0.25
LIME1-205ENST00000480139 H3BSH0 61 aa16.63■□□□□ 0.25
LIME1-205ENST00000480139 LMX1BO60663 402 aa16.63■□□□□ 0.25
LIME1-205ENST00000480139 GATBO75879 557 aaKnown RBP16.63■□□□□ 0.25
LIME1-205ENST00000480139 SERPINA3P01011 423 aa16.63■□□□□ 0.25
LIME1-205ENST00000480139 THBS2P35442 1172 aa16.63■□□□□ 0.25
LIME1-205ENST00000480139 PMELP40967 661 aa16.63■□□□□ 0.25
LIME1-205ENST00000480139 GNG3P63215 75 aa16.63■□□□□ 0.25
LIME1-205ENST00000480139 SPHARQ15513 63 aa16.63■□□□□ 0.25
LIME1-205ENST00000480139 CEP78Q5JTW2 689 aa16.63■□□□□ 0.25
LIME1-205ENST00000480139 MOB3CQ70IA8 216 aa16.63■□□□□ 0.25
LIME1-205ENST00000480139 UTS2BQ765I0 119 aa16.63■□□□□ 0.25
LIME1-205ENST00000480139 OR51A4Q8NGJ6 313 aa16.63■□□□□ 0.25
LIME1-205ENST00000480139 OR13C3Q8NGS6 347 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms