RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 FAM90A1Q86YD7 464 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 ZDHHC23Q8IYP9 409 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 FAM185AQ8N0U4 392 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 ZNF454Q8N9F8 522 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 TMEM185AQ8NFB2 350 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 OR1M1Q8NGA1 313 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 OR5T2Q8NGG2 359 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 OR8D4Q8NGM9 314 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 DACT3Q96B18 629 aaPredicted RBP5.87□□□□□ -1.47
COL17A1-205ENST00000480127 MED30Q96HR3 178 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 FEVQ99581 238 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 FUZQ9BT04 418 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 ABHD6Q9BV23 337 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 CHID1Q9BWS9 393 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 DGCR6LQ9BY27 220 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 MROQ9BYG7 248 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 CHIAQ9BZP6 476 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 CNTD2Q9H8S5 307 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 RNPEPL1Q9HAU8 725 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 PLEKHA1Q9HB21 404 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 TCF7L1Q9HCS4 588 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 PNRC2Q9NPJ4 139 aaKnown RBP5.87□□□□□ -1.47
COL17A1-205ENST00000480127 SIRT7Q9NRC8 400 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 CMC2Q9NRP2 79 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 RHBDD3Q9Y3P4 386 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 POMT1Q9Y6A1 747 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 CMYA5Q8N3K9 4069 aa5.87□□□□□ -1.47
COL17A1-205ENST00000480127 hCG_1809904A0A1W2PP81 198 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 A0A1W2PPE2 198 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 A0A1W2PR64 198 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 A0A1W2PRV1 198 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 TMEM210A6NLX4 147 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 SLC1A7O00341 560 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 AKR7A2O43488 359 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 ANGPTL7O43827 346 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 SELENOFO60613 162 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 ALX3O95076 343 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 NDUFA7O95182 113 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 FSTL3O95633 263 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 TSPAN15O95858 294 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 MELTFP08582 738 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 MRPL3P09001 348 aaKnown RBP5.86□□□□□ -1.47
COL17A1-205ENST00000480127 GLRA1P23415 457 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 ATP6V1E1P36543 226 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 PSMB10P40306 273 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 MAP2K3P46734 347 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 HMGA2P52926 109 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 LGALS4P56470 323 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 FAM3AP98173 230 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 HOXA4Q00056 320 aaPredicted RBP5.86□□□□□ -1.47
COL17A1-205ENST00000480127 GK3PQ14409 553 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 RSPO1Q2MKA7 263 aaPredicted RBP5.86□□□□□ -1.47
COL17A1-205ENST00000480127 ZNF829Q3KNS6 432 aaPredicted RBP5.86□□□□□ -1.47
COL17A1-205ENST00000480127 CDONQ4KMG0 1287 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 TEX30Q5JUR7 227 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 LCN8Q6JVE9 175 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 Q6YL49 198 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 GDPGP1Q6ZNW5 385 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 CPOQ8IVL8 374 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 TMEM86BQ8N661 226 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 FAM216BQ8N7L0 139 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 OR51G2Q8NGK0 314 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 OR4Q3Q8NH05 313 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 ZNF671Q8TAW3 534 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 RPL3LQ92901 407 aaKnown RBP5.86□□□□□ -1.47
COL17A1-205ENST00000480127 SGK3Q96BR1 496 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 ASB9Q96DX5 294 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 NIPSNAP1Q9BPW8 284 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 TTTY10Q9BZA0 68 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 C1orf21Q9H246 121 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 NIPAL2Q9H841 368 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 SMURF1Q9HCE7 757 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 KRT84Q9NSB2 600 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 HAO2Q9NYQ3 351 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 TAS2R1Q9NYW7 299 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 TVP23BQ9NYZ1 205 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 SLC25A10Q9UBX3 287 aaPredicted RBP5.86□□□□□ -1.47
COL17A1-205ENST00000480127 RPUSD1Q9UJJ7 312 aaKnown RBP5.86□□□□□ -1.47
COL17A1-205ENST00000480127 RNF114Q9Y508 228 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 MPC1Q9Y5U8 109 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 KPTNQ9Y664 436 aa5.86□□□□□ -1.47
COL17A1-205ENST00000480127 WNK1Q9H4A3 2382 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 A0A0U1RQK1 487 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 CENPVL3A0A0U1RRI6 287 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 ZNF816-ZNF321PA0A0X1KG74 233 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 hCG_38984A0A1B0GV85 526 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 TMEM269A0A1B0GVZ9 245 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 SLC22A31A6NKX4 558 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 H3BUI4 141 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 PSMD9O00233 223 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 ACOT8O14734 319 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 GPR37O15354 613 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 PRODHO43272 600 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 GPR137BO60478 399 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 MTRF1O75570 445 aaKnown RBP5.85□□□□□ -1.47
COL17A1-205ENST00000480127 CLPXO76031 633 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 NXPH2O95156 264 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 IGHV4-59P01825 116 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 ANXA8P13928 327 aa5.85□□□□□ -1.47
COL17A1-205ENST00000480127 OPRL1P41146 370 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms