RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 BARHL1Q9BZE3 327 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 ZCCHC4Q9H5U6 513 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 PLEKHA1Q9HB21 404 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 MSL2Q9HCI7 577 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 MRPL15Q9P015 296 aaKnown RBP11.16□□□□□ -0.62
CHD3-210ENST00000479080 TAAR3PQ9P1P4 343 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 RSL24D1Q9UHA3 163 aaKnown RBP11.16□□□□□ -0.62
CHD3-210ENST00000479080 DUSP13Q9UII6 198 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 FOXJ3Q9UPW0 622 aa11.16□□□□□ -0.62
CHD3-210ENST00000479080 PLCE1Q9P212 2302 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 A0A1W2PPW3 197 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 HS3ST1O14792 307 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 SULT1B1O43704 296 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 TIMM8AO60220 97 aaPredicted RBP11.15□□□□□ -0.62
CHD3-210ENST00000479080 CDRT1O95170 752 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 SOD3P08294 240 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 PRF1P14222 555 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 SELEP16581 610 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 SRMP19623 302 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 APOBEC3AP31941 199 aaPredicted RBP11.15□□□□□ -0.62
CHD3-210ENST00000479080 THBS2P35442 1172 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 GNALP38405 381 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 RPS19P39019 145 aaKnown RBP11.15□□□□□ -0.62
CHD3-210ENST00000479080 SERPINB10P48595 397 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 PAMR1Q6UXH9 720 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 UNQ6126/PRO20091Q6UXV3 157 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 MOB3CQ70IA8 216 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 SERPINA12Q8IW75 414 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 OR10AD1Q8NGE0 317 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 OR52N4Q8NGI2 321 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 IGFBPL1Q8WX77 278 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 PP6455Q8WZ26 134 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 KCTD7Q96MP8 289 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 ADAT1Q9BUB4 502 aaKnown RBP11.15□□□□□ -0.62
CHD3-210ENST00000479080 PAPOLGQ9BWT3 736 aaKnown RBP11.15□□□□□ -0.62
CHD3-210ENST00000479080 PLK3Q9H4B4 646 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 PLEKHF2Q9H8W4 249 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 BATF3Q9NR55 127 aa11.15□□□□□ -0.62
CHD3-210ENST00000479080 AK6Q9Y3D8 172 aaKnown RBP11.15□□□□□ -0.62
CHD3-210ENST00000479080 SPTAN1Q13813 2472 aaKnown RBP11.14□□□□□ -0.63
CHD3-210ENST00000479080 ZNF701M0R085 212 aaPredicted RBP11.14□□□□□ -0.63
CHD3-210ENST00000479080 ARL6IP5O75915 188 aa11.14□□□□□ -0.63
CHD3-210ENST00000479080 ALX3O95076 343 aa11.14□□□□□ -0.63
CHD3-210ENST00000479080 GOSR1O95249 250 aa11.14□□□□□ -0.63
CHD3-210ENST00000479080 NRASP01111 189 aa11.14□□□□□ -0.63
CHD3-210ENST00000479080 IGHV1-46P01743 117 aa11.14□□□□□ -0.63
CHD3-210ENST00000479080 MAS1P04201 325 aa11.14□□□□□ -0.63
CHD3-210ENST00000479080 CD2P06729 351 aa11.14□□□□□ -0.63
CHD3-210ENST00000479080 COX6B1P14854 86 aa11.14□□□□□ -0.63
CHD3-210ENST00000479080 AZGP1P25311 298 aaKnown RBP11.14□□□□□ -0.63
CHD3-210ENST00000479080 SERPINF1P36955 418 aa11.14□□□□□ -0.63
CHD3-210ENST00000479080 MXD1Q05195 221 aa11.14□□□□□ -0.63
CHD3-210ENST00000479080 PLCXD3Q63HM9 321 aa11.14□□□□□ -0.63
CHD3-210ENST00000479080 FAM166AQ6J272 317 aa11.14□□□□□ -0.63
CHD3-210ENST00000479080 ZDHHC23Q8IYP9 409 aa11.14□□□□□ -0.63
CHD3-210ENST00000479080 ZCCHC24Q8N2G6 241 aaKnown RBP11.14□□□□□ -0.63
CHD3-210ENST00000479080 TRMT10AQ8TBZ6 339 aaKnown RBP11.14□□□□□ -0.63
CHD3-210ENST00000479080 DYNC2LI1Q8TCX1 351 aa11.14□□□□□ -0.63
CHD3-210ENST00000479080 OR5P3Q8WZ94 311 aa11.14□□□□□ -0.63
CHD3-210ENST00000479080 ITFG2Q969R8 447 aa11.14□□□□□ -0.63
CHD3-210ENST00000479080 DCSTAMPQ9H295 470 aa11.14□□□□□ -0.63
CHD3-210ENST00000479080 SNTG1Q9NSN8 517 aa11.14□□□□□ -0.63
CHD3-210ENST00000479080 PLEKHB1Q9UF11 243 aaPredicted RBP11.14□□□□□ -0.63
CHD3-210ENST00000479080 CGGBP1Q9UFW8 167 aaPredicted RBP11.14□□□□□ -0.63
CHD3-210ENST00000479080 PMF1-BGLAPU3KQ54 211 aa11.14□□□□□ -0.63
CHD3-210ENST00000479080 HEATR1Q9H583 2144 aaKnown RBP11.14□□□□□ -0.63
CHD3-210ENST00000479080 DCHS2Q6V1P9 2916 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 ICE1Q9Y2F5 2266 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 LOC100289279A0A1B0GTE1 492 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 PQLC2LA1A4F0 135 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 CCDC160A6NGH7 325 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 ANKRD30BLA7E2S9 258 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 C3orf80F5H4A9 247 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 F5H5P2 479 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 SLC22A1O15245 554 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 NAT2P11245 290 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 RAB3AP20336 220 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 EVX1P49640 407 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 ZP1P60852 638 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 TLE4Q04727 773 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 MAB21L1Q13394 359 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 CEACAM21Q3KPI0 293 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 DTX2Q86UW9 622 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 MUC15Q8N387 334 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 ZNF611Q8N823 705 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 THRSPQ92748 146 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 FBXW5Q969U6 566 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 RFT1Q96AA3 541 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 DGCR14Q96DF8 476 aaKnown RBP11.13□□□□□ -0.63
CHD3-210ENST00000479080 TRAF4Q9BUZ4 470 aaPredicted RBP11.13□□□□□ -0.63
CHD3-210ENST00000479080 NDUFA13Q9P0J0 144 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 GSTK1Q9Y2Q3 226 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 MPC1Q9Y5U8 109 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 ROS1P08922 2347 aa11.13□□□□□ -0.63
CHD3-210ENST00000479080 A0A0B4J203 849 aa11.12□□□□□ -0.63
CHD3-210ENST00000479080 IGHV3-64DA0A0J9YX35 117 aa11.12□□□□□ -0.63
CHD3-210ENST00000479080 IL1AP01583 271 aa11.12□□□□□ -0.63
CHD3-210ENST00000479080 ALDOBP05062 364 aa11.12□□□□□ -0.63
CHD3-210ENST00000479080 SLC2A2P11168 524 aaPredicted RBP11.12□□□□□ -0.63
CHD3-210ENST00000479080 RAB3BP20337 219 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms