RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 TBC1D28Q2M2D7 210 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 NSUN5P1Q3KNT7 163 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 TMEM255AQ5JRV8 349 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 SPATA46Q5T0L3 261 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 THEM4Q5T1C6 240 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 LINC01590Q5TEZ4 76 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 ZNF774Q6NX45 483 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 KCTD8Q6ZWB6 473 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 ZBTB46Q86UZ6 589 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 ERI1Q8IV48 349 aaKnown RBP8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 GLB1L2Q8IW92 636 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 SKA3Q8IX90 412 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 SLC35F2Q8IXU6 374 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 SPARTQ8N0X7 666 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 GATAD2BQ8WXI9 593 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 NSMAFQ92636 917 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 FCGR1BQ92637 280 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 TMEM54Q969K7 222 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 NMD3Q96D46 503 aaKnown RBP8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 INTS14Q96SY0 518 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 MND1Q9BWT6 205 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 JAM3Q9BX67 310 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 CDCA4Q9BXL8 241 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 DPAGT1Q9H3H5 408 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 TMEM165Q9HC07 324 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 INPP5EQ9NRR6 644 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 ACOXLQ9NUZ1 547 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 GLTPQ9NZD2 209 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 B9D1Q9UPM9 204 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 ERGIC3Q9Y282 383 aa8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 EXOGQ9Y2C4 368 aaKnown RBP8.05□□□□□ -1.12
SMARCB1-206ENST00000477836 CENPVL3A0A0U1RRI6 287 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 TVP23AA6NH52 213 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 C12orf71A8MTZ7 269 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 QDPRP09417 244 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 IGLL1P15814 213 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 MPV17P39210 176 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 MDH2P40926 338 aaKnown RBP8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 MAP2K4P45985 399 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 ZNF84P51523 738 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 TNFAIP6P98066 277 aaPredicted RBP8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 IRF3Q14653 427 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 HIST3H3Q16695 136 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 ZNF718Q3SXZ3 478 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 RNLSQ5VYX0 342 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 SLC35E4Q6ICL7 350 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 LYPD4Q6UWN0 246 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 ZNF367Q7RTV3 350 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 SLC16A9Q7RTY1 509 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 KLBQ86Z14 1044 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 MUC20Q8N307 709 aaPredicted RBP8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 ACBD7Q8N6N7 88 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 ZNF283Q8N7M2 679 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 ZNF511Q8NB15 262 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 SLC26A10Q8NG04 563 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 OR6N2Q8NGY6 317 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 ZNRF4Q8WWF5 429 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 CFHR4Q92496 578 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 RORBQ92753 470 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 MCHR2Q969V1 340 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 MYCBPQ99417 103 aaPredicted RBP8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 MNTQ99583 582 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 TBX5Q99593 518 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 MMP28Q9H239 520 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 RNF121Q9H920 327 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 ACOT13Q9NPJ3 140 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 CYSLTR2Q9NS75 346 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 ZDHHC8Q9ULC8 765 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 COA3Q9Y2R0 106 aaPredicted RBP8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 POLR1DQ9Y2S0 133 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 SIGLEC9Q9Y336 463 aa8.04□□□□□ -1.12
SMARCB1-206ENST00000477836 IGKV1D-43A0A0B4J1Z2 117 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 A0A0U1RQK1 487 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 DAPL1A0PJW8 107 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 ZNF670-ZNF695F2Z2N8 137 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 J3QRE1 110 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 PTHP01270 115 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 CD55P08174 381 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 ADH4P08319 380 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 SPARCP09486 303 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 OR2T7P0C7T2 308 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 CCNOP22674 350 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 PSMB9P28065 219 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 GABRA5P31644 462 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 LIPAP38571 399 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 GUCA1AP43080 201 aaPredicted RBP8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 RPL5P46777 297 aaKnown RBP8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 ENTPD1P49961 510 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 ETV1P50549 477 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 ACTA2P62736 377 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 ACTG2P63267 376 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 HSF2Q03933 536 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 EMX1Q04741 257 aaPredicted RBP8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 C10orf128Q5T292 105 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 CASC10Q5T4H9 136 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 XAF1Q6GPH4 301 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 LDLRAD3Q86YD5 345 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 TIGD4Q8IY51 512 aa8.03□□□□□ -1.12
SMARCB1-206ENST00000477836 OR1J2Q8NGS2 313 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms