RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 KCNJ15Q99712 375 aa5.44□□□□□ -1.54
RTFDC1-206ENST00000477485 CITED2Q99967 270 aaPredicted RBP5.44□□□□□ -1.54
RTFDC1-206ENST00000477485 RTL8AQ9BWD3 113 aa5.44□□□□□ -1.54
RTFDC1-206ENST00000477485 PPP1R3EQ9H7J1 279 aa5.44□□□□□ -1.54
RTFDC1-206ENST00000477485 ABCB10Q9NRK6 738 aa5.44□□□□□ -1.54
RTFDC1-206ENST00000477485 MRGBPQ9NV56 204 aa5.44□□□□□ -1.54
RTFDC1-206ENST00000477485 CMTM6Q9NX76 183 aa5.44□□□□□ -1.54
RTFDC1-206ENST00000477485 KCNG2Q9UJ96 466 aa5.44□□□□□ -1.54
RTFDC1-206ENST00000477485 NOTCH3Q9UM47 2321 aa5.44□□□□□ -1.54
RTFDC1-206ENST00000477485 AP3M1Q9Y2T2 418 aa5.44□□□□□ -1.54
RTFDC1-206ENST00000477485 ZNF850A8MQ14 1090 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 M0R1W7 72 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 NME4O00746 187 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 GLCEO94923 617 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 GYPBP06028 91 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 PSKH1P11801 424 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 RHCEP18577 417 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 PAICSP22234 425 aaKnown RBP5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 GLRA1P23415 457 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 DDOSTP39656 456 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 SLC15A1P46059 708 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 ENTPD1P49961 510 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 NUDT2P50583 147 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 RAB13P51153 203 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 GRB2P62993 217 aaKnown RBP5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 FAM3AP98173 230 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 IL5RAQ01344 420 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 PRDX4Q13162 271 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 EIF2B1Q14232 305 aaKnown RBP5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 KHDC1LQ5JSQ8 128 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 CCBE1Q6UXH8 406 aaPredicted RBP5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 LIAT1Q6ZQX7 453 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 SLC15A3Q8IY34 581 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 MKXQ8IYA7 352 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 LINC00471Q8N535 108 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 DTX3Q8N9I9 347 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 ZNRF1Q8ND25 227 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 PIGCQ92535 297 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 TNFRSF14Q92956 283 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 PGAM5Q96HS1 289 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 OCSTAMPQ9BR26 566 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 EGLN3Q9H6Z9 239 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 SP140LQ9H930 580 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 SAR1AQ9NR31 198 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 NDUFAF4Q9P032 175 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 NLKQ9UBE8 527 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 SAMD4AQ9UPU9 718 aaKnown RBP5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 RHBDD3Q9Y3P4 386 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 COMMD3-BMI1R4GMX3 469 aa5.43□□□□□ -1.54
RTFDC1-206ENST00000477485 hCG_38984A0A1B0GV85 526 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 A0A1W2PPH5 198 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 OR2AT4A6NND4 320 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 HMGB1P1B2RPK0 211 aaPredicted RBP5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 K7EIL1 84 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 ZNF593O00488 134 aaPredicted RBP5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 ARPC3O15145 178 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 SIGLEC5O15389 551 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 AMY2BP19961 511 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 FMO3P31513 532 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 MSX2P35548 267 aaPredicted RBP5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 IFNGR2P38484 337 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 VDAC2P45880 294 aaPredicted RBP5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 TGM4P49221 684 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 GSK3AP49840 483 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 GPM6AP51674 278 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 ZNF121P58317 390 aaPredicted RBP5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 SMIM11AP58511 58 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 CBX1P83916 185 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 CNN3Q15417 329 aaKnown RBP5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 SNCBQ16143 134 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 TMEM95Q3KNT9 176 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 GLYATQ6IB77 296 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 ZNF782Q6ZMW2 699 aaPredicted RBP5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 ZNF788Q6ZQV5 615 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 CCDC121Q6ZUS5 278 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 COMMD2Q86X83 199 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 ERI1Q8IV48 349 aaKnown RBP5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 TIGD4Q8IY51 512 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 RNF148Q8N7C7 305 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 FAM86B1Q8N7N1 296 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 ZNF511Q8NB15 262 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 PAPD5Q8NDF8 572 aaKnown RBP5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 CSNK2A3Q8NEV1 391 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 OR4M1Q8NGD0 313 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 OR6N2Q8NGY6 317 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 C8orf46Q8TAG6 207 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 FAM81AQ8TBF8 368 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 GNPDA2Q8TDQ7 276 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 MCUR1Q96AQ8 359 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 SGK3Q96BR1 496 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 RNF170Q96K19 258 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 DMRTB1Q96MA1 342 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 RAB3IPQ96QF0 476 aaPredicted RBP5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 HIST1H2AAQ96QV6 131 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 DDOQ99489 341 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 PRSS22Q9GZN4 317 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 DNTTIP1Q9H147 329 aa5.42□□□□□ -1.54
RTFDC1-206ENST00000477485 OR10A2Q9H208 303 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms