RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 OR5P3Q8WZ94 311 aa10.73□□□□□ -0.69
MRPL55-228ENST00000476267 AJUBAQ96IF1 538 aa10.73□□□□□ -0.69
MRPL55-228ENST00000476267 LYZL4Q96KX0 146 aa10.73□□□□□ -0.69
MRPL55-228ENST00000476267 INTS14Q96SY0 518 aa10.73□□□□□ -0.69
MRPL55-228ENST00000476267 MED20Q9H944 212 aa10.73□□□□□ -0.69
MRPL55-228ENST00000476267 TCF7L1Q9HCS4 588 aa10.73□□□□□ -0.69
MRPL55-228ENST00000476267 ACTR3BQ9P1U1 418 aa10.73□□□□□ -0.69
MRPL55-228ENST00000476267 TAGLN3Q9UI15 199 aa10.73□□□□□ -0.69
MRPL55-228ENST00000476267 DNAH3Q8TD57 4116 aa10.73□□□□□ -0.69
MRPL55-228ENST00000476267 NOTCH1P46531 2555 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 FAM183AA6NL82 134 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 GLCEO94923 617 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 CST4P01036 141 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 APOC1P02654 83 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 SAA4P35542 130 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 TGFBR2P37173 567 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 UBE2E1P51965 193 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 IL5RAQ01344 420 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 DHRS7BQ6IAN0 325 aaPredicted RBP10.72□□□□□ -0.69
MRPL55-228ENST00000476267 CD300LDQ6UXZ3 194 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 ERI1Q8IV48 349 aaKnown RBP10.72□□□□□ -0.69
MRPL55-228ENST00000476267 DEFB107AQ8IZN7 70 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 CMTM4Q8IZR5 234 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 OR5T2Q8NGG2 359 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 OR6N2Q8NGY6 317 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 RPL3LQ92901 407 aaKnown RBP10.72□□□□□ -0.69
MRPL55-228ENST00000476267 UBE2FQ969M7 185 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 NIPSNAP1Q9BPW8 284 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 PAPOLGQ9BWT3 736 aaKnown RBP10.72□□□□□ -0.69
MRPL55-228ENST00000476267 OR10A2Q9H208 303 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 RGCCQ9H4X1 137 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 MAGIXQ9H6Y5 334 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 SP140LQ9H930 580 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 DNAJC27Q9NZQ0 273 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 ZNF222Q9UK12 451 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 CAB39Q9Y376 341 aaPredicted RBP10.72□□□□□ -0.69
MRPL55-228ENST00000476267 FAM96BQ9Y3D0 163 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 MPC1Q9Y5U8 109 aa10.72□□□□□ -0.69
MRPL55-228ENST00000476267 ZNF816-ZNF321PA0A0X1KG74 233 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 TMEM210A6NLX4 147 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 M0R1W7 72 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 SIGLEC5O15389 551 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 IFNGP01579 166 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 ACAA1P09110 424 aaPredicted RBP10.71□□□□□ -0.69
MRPL55-228ENST00000476267 ZNF3P17036 446 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 GSTT1P30711 240 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 CAV3P56539 151 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 ACSM1Q08AH1 577 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 PRDX4Q13162 271 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 GFOD2Q3B7J2 385 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 LRRC10Q5BKY1 277 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 SLC35E4Q6ICL7 350 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 LCN8Q6JVE9 175 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 CRIP3Q6Q6R5 217 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 C16orf89Q6UX73 402 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 BEND2Q8NDZ0 799 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 OR5R1Q8NH85 324 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 OTOSQ8NHW6 89 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 MICU1Q9BPX6 476 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 RTL8AQ9BWD3 113 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 ABCB9Q9NP78 766 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 SNTG1Q9NSN8 517 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 DNAJB11Q9UBS4 358 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 FBLN5Q9UBX5 448 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 U3KQV3 271 aa10.71□□□□□ -0.69
MRPL55-228ENST00000476267 IGKV1D-17A0A075B6S4 117 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 A0A1W2PRD5 423 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 A0A1W2PRF3 423 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 A0A1W2PRM7 423 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 ANXA2P2A6NMY6 339 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 RIIAD1A6NNX1 92 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 ZNF850A8MQ14 1090 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 AKR7A2O43488 359 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 EEF1B2P24534 225 aaKnown RBP10.7□□□□□ -0.7
MRPL55-228ENST00000476267 GNALP38405 381 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 EGR3Q06889 387 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 SNCBQ16143 134 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 C2orf68Q2NKX9 166 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 OR2T5Q6IEZ7 315 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 SHFQ7M4L6 423 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 C1QL4Q86Z23 238 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 IQCF1Q8N6M8 205 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 OR2T29Q8NH02 315 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 PPP1R35Q8TAP8 253 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 C17orf50Q8WW18 174 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 H1FXQ92522 213 aaKnown RBP10.7□□□□□ -0.7
MRPL55-228ENST00000476267 PGAM5Q96HS1 289 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 FAM107BQ9H098 131 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 METTL8Q9H825 291 aaKnown RBP10.7□□□□□ -0.7
MRPL55-228ENST00000476267 BRD7Q9NPI1 651 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 NDE1Q9NXR1 346 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 SLC25A10Q9UBX3 287 aaPredicted RBP10.7□□□□□ -0.7
MRPL55-228ENST00000476267 ZNF391Q9UJN7 358 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 KLHDC2Q9Y2U9 406 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 SAMHD1Q9Y3Z3 626 aaKnown RBP10.7□□□□□ -0.7
MRPL55-228ENST00000476267 MAB21L2Q9Y586 359 aa10.7□□□□□ -0.7
MRPL55-228ENST00000476267 TET2Q6N021 2002 aaPredicted RBP10.7□□□□□ -0.7
MRPL55-228ENST00000476267 MEIOCA2RUB1 952 aa10.69□□□□□ -0.7
MRPL55-228ENST00000476267 BTBD17A6NE02 478 aa10.69□□□□□ -0.7
MRPL55-228ENST00000476267 NKX6-3A6NJ46 265 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms