RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 SLC25A4P12235 298 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 NME1P15531 152 aaKnown RBP10.42□□□□□ -0.74
U2AF1-209ENST00000475639 MLF1P58340 268 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 NHLH1Q02575 133 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 NHLH2Q02577 135 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 ETFRF1Q6IPR1 90 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 SIRT6Q8N6T7 355 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 ZNF511Q8NB15 262 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 CMTM3Q96MX0 182 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 JAM3Q9BX67 310 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 KLK11Q9UBX7 282 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 A0A1B0GV90 55 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 LRRC3CA6NJW4 275 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 SYT5O00445 386 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 CER1O95813 267 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 MGMTP16455 207 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 FCGR2CP31995 323 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 LPAL2Q16609 132 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 C10orf91Q5T1B1 145 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 MRGPREQ86SM8 312 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 ZNF480Q8WV37 535 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 FER1L6-AS2Q96M78 137 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 PADI1Q9ULC6 663 aa10.42□□□□□ -0.74
U2AF1-209ENST00000475639 DRGXA6NNA5 263 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 H7C1C5 153 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 PIAS2O75928 621 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 LY86O95711 162 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 CSF2RAP15509 400 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 ALOX5APP20292 161 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 SPCS3P61009 180 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 CSNK1G2P78368 415 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 GUK1Q16774 197 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 PRAMEF20Q5VT98 475 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 ZNF787Q6DD87 383 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 PET117Q6UWS5 81 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 OR52I2Q8NH67 350 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 SLC38A5Q8WUX1 472 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 EXOGQ9Y2C4 368 aaKnown RBP10.41□□□□□ -0.74
U2AF1-209ENST00000475639 A0A1W2PPE3 182 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 COLCA2A8K830 154 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 VSIG10L2P0DP72 767 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 SRMP19623 302 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 PTGER1P34995 402 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 CXCL12P48061 93 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 SSR4P51571 173 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 PPIAP62937 165 aaKnown RBP10.41□□□□□ -0.74
U2AF1-209ENST00000475639 SRSF3P84103 164 aaKnown RBP10.41□□□□□ -0.74
U2AF1-209ENST00000475639 IQCJQ1A5X6 159 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 RPUSD3Q6P087 351 aaKnown RBP10.41□□□□□ -0.74
U2AF1-209ENST00000475639 DPY19L2P2Q6ZN68 376 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 TMPRSS11FQ6ZWK6 438 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 MED20Q9H944 212 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 LRIT1Q9P2V4 623 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 CEP350Q5VT06 3117 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 A0A1B0GTQ1 180 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 PVRP15151 417 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 RBP2P50120 134 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 SULT1A2P50226 295 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 RTL8BQ17RB0 113 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 CLEC12BQ2HXU8 276 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 DRAM2Q6UX65 266 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 MBOAT2Q6ZWT7 520 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 OR2W3Q7Z3T1 314 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 GRINAQ7Z429 371 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 UBAC2Q8NBM4 344 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 CARHSP1Q9Y2V2 147 aaKnown RBP10.41□□□□□ -0.74
U2AF1-209ENST00000475639 NSG2Q9Y328 171 aa10.41□□□□□ -0.74
U2AF1-209ENST00000475639 TMED7-TICAM2A0A0A6YYA0 188 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 KIAA1324LA8MWY0 1029 aaPredicted RBP10.4□□□□□ -0.74
U2AF1-209ENST00000475639 M0R143 59 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 HSD17B6O14756 317 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 TOX3O15405 576 aaPredicted RBP10.4□□□□□ -0.74
U2AF1-209ENST00000475639 NXPH3O95157 252 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 FAM87AP0C7U9 286 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 HTR1FP30939 366 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 PRSS53Q2L4Q9 553 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 UBE3DQ7Z6J8 389 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 LINC00346Q8IVM7 164 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 MORN4Q8NDC4 146 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 STACQ99469 402 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 MACROD1Q9BQ69 325 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 TIMM29Q9BSF4 260 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 RNF122Q9H9V4 155 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 LMAN1LQ9HAT1 526 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 STARD5Q9NSY2 213 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 TMED7Q9Y3B3 224 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 RNASEK-C17orf49H0YIS7 233 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 HCRTR1O43613 425 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 ACTL6AO96019 429 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 F11P03951 625 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 ZNF17P17021 662 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 ZNF154Q13106 437 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 IL10RAQ13651 578 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 CEBPEQ15744 281 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 TBC1D28Q2M2D7 210 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 LYSMD4Q5XG99 296 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 OR4A4PQ8NGN8 299 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 AKR7LQ8NHP1 331 aa10.4□□□□□ -0.74
U2AF1-209ENST00000475639 SLC25A43Q8WUT9 341 aaPredicted RBP10.4□□□□□ -0.74
U2AF1-209ENST00000475639 RTL8AQ9BWD3 113 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms