RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 ZNF593O00488 134 aaPredicted RBP3.55□□□□□ -1.84
SMC5-203ENST00000475540 PEX7O00628 323 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 LIN7AO14910 233 aaPredicted RBP3.55□□□□□ -1.84
SMC5-203ENST00000475540 KMOO15229 486 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 ENSAO43768 121 aaKnown RBP3.55□□□□□ -1.84
SMC5-203ENST00000475540 RDH16O75452 317 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 MYO1DO94832 1006 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 RCBTB2O95199 551 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 AHSA1O95433 338 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 TTC4O95801 387 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 PTTG1O95997 202 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 PTHP01270 115 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 GP1BAP07359 652 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 RD3LP0DJH9 198 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 CD37P11049 281 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 NEFHP12036 1026 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 CEACAM3P40198 252 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 MAGEA3P43357 314 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 PPICP45877 212 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 UBE2E1P51965 193 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 MYL6P60660 151 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 CTAG1AP78358 180 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 MRPS15P82914 257 aaKnown RBP3.55□□□□□ -1.84
SMC5-203ENST00000475540 PITPNAQ00169 270 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 STX4Q12846 297 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 FLOT2Q14254 428 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 DMC1Q14565 340 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 ZNF266Q14584 549 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 OR2T5Q6IEZ7 315 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 FAM151BQ6UXP7 276 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 LINC00173Q6ZV60 143 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 MRPL52Q86TS9 123 aaKnown RBP3.55□□□□□ -1.84
SMC5-203ENST00000475540 TMEM25Q86YD3 366 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 ZNF695Q8IW36 515 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 C12orf56Q8IXR9 622 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 LYPD1Q8N2G4 141 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 RNF10Q8N5U6 811 aaKnown RBP3.55□□□□□ -1.84
SMC5-203ENST00000475540 CYB561D1Q8N8Q1 229 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 ZNF565Q8N9K5 539 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 OR10G2Q8NGC3 310 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 OR2T29Q8NH02 315 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 ITFG2Q969R8 447 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 GALNT14Q96FL9 552 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 ADTRPQ96IZ2 230 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 UBE2E2Q96LR5 201 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 RNF145Q96MT1 663 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 TAAR1Q96RJ0 339 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 GABRG3Q99928 467 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 WDR54Q9H977 334 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 IMP3Q9NV31 184 aaKnown RBP3.55□□□□□ -1.84
SMC5-203ENST00000475540 C1orf109Q9NX04 203 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 PCYOX1Q9UHG3 505 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 TRMT112Q9UI30 125 aaKnown RBP3.55□□□□□ -1.84
SMC5-203ENST00000475540 AP3M1Q9Y2T2 418 aa3.55□□□□□ -1.84
SMC5-203ENST00000475540 KIF26AQ9ULI4 1882 aaPredicted RBP3.54□□□□□ -1.84
SMC5-203ENST00000475540 POLR3AO14802 1390 aaPredicted RBP3.54□□□□□ -1.84
SMC5-203ENST00000475540 BRD4O60885 1362 aaPredicted RBP3.54□□□□□ -1.84
SMC5-203ENST00000475540 RAD50Q92878 1312 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 IGHV2OR16-5A0A0B4J2B6 119 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 GOLGA8IPA6NC78 632 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 PRAMEF26H0Y7S4 382 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 H7C1H1 209 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 M0QXV9 152 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 AQP9O43315 295 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 COCHO43405 550 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 ANGPTL7O43827 346 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 UPK1BO75841 260 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 PET100P0DJ07 73 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 CXCL5P42830 114 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 PPP1CBP62140 327 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 KDSRQ06136 332 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 PON3Q15166 354 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 RBM48Q5RL73 367 aaKnown RBP3.54□□□□□ -1.84
SMC5-203ENST00000475540 AP1ARQ63HQ0 302 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 ZNF493Q6ZR52 646 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 SLC30A8Q8IWU4 369 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 Q8N976 141 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 OR4S2Q8NH73 311 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 OR5AK3PQ8NH89 298 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 ZFAND1Q8TCF1 268 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 LRRC29Q8WV35 223 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 DEDD2Q8WXF8 326 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 CREB3L1Q96BA8 519 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 VAT1Q99536 393 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 DCUN1D5Q9BTE7 237 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 METTL8Q9H825 291 aaKnown RBP3.54□□□□□ -1.84
SMC5-203ENST00000475540 UCK1Q9HA47 277 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 ISYNA1Q9NPH2 558 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 MED4Q9NPJ6 270 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 FBXO8Q9NRD0 319 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 TREX1Q9NSU2 369 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 FAM49BQ9NUQ9 324 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 DENND4AQ7Z401 1863 aa3.54□□□□□ -1.84
SMC5-203ENST00000475540 IGHV3OR16-9A0A0B4J2B5 98 aa3.53□□□□□ -1.84
SMC5-203ENST00000475540 GOLGA6L10A6NI86 522 aa3.53□□□□□ -1.84
SMC5-203ENST00000475540 KLRC4-KLRK1H3BQV0 150 aa3.53□□□□□ -1.84
SMC5-203ENST00000475540 H7C417 338 aa3.53□□□□□ -1.84
SMC5-203ENST00000475540 CTNSO60931 367 aa3.53□□□□□ -1.84
SMC5-203ENST00000475540 SUPT3HO75486 399 aa3.53□□□□□ -1.84
SMC5-203ENST00000475540 MRPL3P09001 348 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms