RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 DNTTIP1Q9H147 329 aa16.83■□□□□ 0.28
PDLIM4-206ENST00000474421 SLC25A19Q9HC21 320 aa16.83■□□□□ 0.28
PDLIM4-206ENST00000474421 ZNF850A8MQ14 1090 aa16.82■□□□□ 0.28
PDLIM4-206ENST00000474421 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.82■□□□□ 0.28
PDLIM4-206ENST00000474421 FKBP6O75344 327 aa16.82■□□□□ 0.28
PDLIM4-206ENST00000474421 ALOX5APP20292 161 aa16.82■□□□□ 0.28
PDLIM4-206ENST00000474421 CDONQ4KMG0 1287 aa16.82■□□□□ 0.28
PDLIM4-206ENST00000474421 LRRC10Q5BKY1 277 aa16.82■□□□□ 0.28
PDLIM4-206ENST00000474421 ATPAF1Q5TC12 328 aaPredicted RBP16.82■□□□□ 0.28
PDLIM4-206ENST00000474421 DEGS2Q6QHC5 323 aa16.82■□□□□ 0.28
PDLIM4-206ENST00000474421 KRT77Q7Z794 578 aa16.82■□□□□ 0.28
PDLIM4-206ENST00000474421 CMTM4Q8IZR5 234 aa16.82■□□□□ 0.28
PDLIM4-206ENST00000474421 HS3ST5Q8IZT8 346 aa16.82■□□□□ 0.28
PDLIM4-206ENST00000474421 OR4F5Q8NH21 305 aa16.82■□□□□ 0.28
PDLIM4-206ENST00000474421 FAM81AQ8TBF8 368 aa16.82■□□□□ 0.28
PDLIM4-206ENST00000474421 TBC1D15Q8TC07 691 aa16.82■□□□□ 0.28
PDLIM4-206ENST00000474421 SSMEM1Q8WWF3 244 aa16.82■□□□□ 0.28
PDLIM4-206ENST00000474421 OR5P3Q8WZ94 311 aa16.82■□□□□ 0.28
PDLIM4-206ENST00000474421 LHX4Q969G2 390 aa16.82■□□□□ 0.28
PDLIM4-206ENST00000474421 NRBF2Q96F24 287 aa16.82■□□□□ 0.28
PDLIM4-206ENST00000474421 HIST1H2AAQ96QV6 131 aa16.82■□□□□ 0.28
PDLIM4-206ENST00000474421 DNAJB11Q9UBS4 358 aa16.82■□□□□ 0.28
PDLIM4-206ENST00000474421 LRP12Q9Y561 859 aa16.82■□□□□ 0.28
PDLIM4-206ENST00000474421 PKD1L1Q8TDX9 2849 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 A0A1B0GVI7 797 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 TCRBV3S1A0A5B6 114 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 FAM181BA6NEQ2 426 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 NKX6-3A6NJ46 265 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 FCN3O75636 299 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 MELTFP08582 738 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 PRKACGP22612 351 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 SLC2A5P22732 501 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 ACKR3P25106 362 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 RPL15P61313 204 aaKnown RBP16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 SNAPC1Q16533 368 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 FAM76BQ5HYJ3 339 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 LCN1P1Q5VSP4 162 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 KCTD8Q6ZWB6 473 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 ZDHHC23Q8IYP9 409 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 SCCPDHQ8NBX0 429 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 PAPD5Q8NDF8 572 aaKnown RBP16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 LY6G5BQ8NDX9 201 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 OR8B12Q8NGG6 310 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 PIGCQ92535 297 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 RNF170Q96K19 258 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 PKP2Q99959 881 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 PPP1R3EQ9H7J1 279 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 BEX1Q9HBH7 125 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 HAO2Q9NYQ3 351 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 TRRAPQ9Y4A5 3859 aa16.81■□□□□ 0.28
PDLIM4-206ENST00000474421 A0A0U1RQV5 110 aa16.8■□□□□ 0.28
PDLIM4-206ENST00000474421 MDKP21741 143 aaPredicted RBP16.8■□□□□ 0.28
PDLIM4-206ENST00000474421 MAP2K3P46734 347 aa16.8■□□□□ 0.28
PDLIM4-206ENST00000474421 TGM4P49221 684 aa16.8■□□□□ 0.28
PDLIM4-206ENST00000474421 APOFQ13790 326 aa16.8■□□□□ 0.28
PDLIM4-206ENST00000474421 STUMQ69YW2 141 aa16.8■□□□□ 0.28
PDLIM4-206ENST00000474421 FIP1L1Q6UN15 594 aaKnown RBP16.8■□□□□ 0.28
PDLIM4-206ENST00000474421 KIR3DL3Q8N743 410 aa16.8■□□□□ 0.28
PDLIM4-206ENST00000474421 FAM216BQ8N7L0 139 aa16.8■□□□□ 0.28
PDLIM4-206ENST00000474421 BBS1Q8NFJ9 593 aa16.8■□□□□ 0.28
PDLIM4-206ENST00000474421 MED30Q96HR3 178 aa16.8■□□□□ 0.28
PDLIM4-206ENST00000474421 LYZL4Q96KX0 146 aa16.8■□□□□ 0.28
PDLIM4-206ENST00000474421 RAB3IPQ96QF0 476 aaPredicted RBP16.8■□□□□ 0.28
PDLIM4-206ENST00000474421 MROQ9BYG7 248 aa16.8■□□□□ 0.28
PDLIM4-206ENST00000474421 PRRG3Q9BZD7 231 aa16.8■□□□□ 0.28
PDLIM4-206ENST00000474421 PAPOLBQ9NRJ5 636 aaKnown RBP16.8■□□□□ 0.28
PDLIM4-206ENST00000474421 TNFRSF19Q9NS68 423 aa16.8■□□□□ 0.28
PDLIM4-206ENST00000474421 TVP23BQ9NYZ1 205 aa16.8■□□□□ 0.28
PDLIM4-206ENST00000474421 ONECUT1Q9UBC0 465 aa16.8■□□□□ 0.28
PDLIM4-206ENST00000474421 KLHDC2Q9Y2U9 406 aa16.8■□□□□ 0.28
PDLIM4-206ENST00000474421 TMEM14AQ9Y6G1 99 aa16.8■□□□□ 0.28
PDLIM4-206ENST00000474421 ZNF816-ZNF321PA0A0X1KG74 233 aa16.79■□□□□ 0.28
PDLIM4-206ENST00000474421 DYNC1I1O14576 645 aa16.79■□□□□ 0.28
PDLIM4-206ENST00000474421 NDUFA7O95182 113 aa16.79■□□□□ 0.28
PDLIM4-206ENST00000474421 ATP6V1B1P15313 513 aa16.79■□□□□ 0.28
PDLIM4-206ENST00000474421 DCTDP32321 178 aa16.79■□□□□ 0.28
PDLIM4-206ENST00000474421 CRISP1P54107 249 aa16.79■□□□□ 0.28
PDLIM4-206ENST00000474421 RAG2P55895 527 aa16.79■□□□□ 0.28
PDLIM4-206ENST00000474421 IKZF1Q13422 519 aa16.79■□□□□ 0.28
PDLIM4-206ENST00000474421 TMEM236Q5W0B7 351 aa16.79■□□□□ 0.28
PDLIM4-206ENST00000474421 METAP1DQ6UB28 335 aaPredicted RBP16.79■□□□□ 0.28
PDLIM4-206ENST00000474421 KRT74Q7RTS7 529 aa16.79■□□□□ 0.28
PDLIM4-206ENST00000474421 VMO1Q7Z5L0 202 aa16.79■□□□□ 0.28
PDLIM4-206ENST00000474421 NPRL2Q8WTW4 380 aa16.79■□□□□ 0.28
PDLIM4-206ENST00000474421 ASB17Q8WXJ9 295 aa16.79■□□□□ 0.28
PDLIM4-206ENST00000474421 RPL3LQ92901 407 aaKnown RBP16.79■□□□□ 0.28
PDLIM4-206ENST00000474421 TEAD3Q99594 435 aa16.79■□□□□ 0.28
PDLIM4-206ENST00000474421 CHIAQ9BZP6 476 aa16.79■□□□□ 0.28
PDLIM4-206ENST00000474421 POMPQ9Y244 141 aa16.79■□□□□ 0.28
PDLIM4-206ENST00000474421 CAB39Q9Y376 341 aaPredicted RBP16.79■□□□□ 0.28
PDLIM4-206ENST00000474421 TMEM269A0A1B0GVZ9 245 aa16.78■□□□□ 0.28
PDLIM4-206ENST00000474421 A0A1B0GW55 424 aa16.78■□□□□ 0.28
PDLIM4-206ENST00000474421 ZNF254O75437 659 aa16.78■□□□□ 0.28
PDLIM4-206ENST00000474421 DNAJC8O75937 253 aaPredicted RBP16.78■□□□□ 0.28
PDLIM4-206ENST00000474421 KNG1P01042 644 aa16.78■□□□□ 0.28
PDLIM4-206ENST00000474421 DUX4L2P0CJ85 424 aa16.78■□□□□ 0.28
PDLIM4-206ENST00000474421 DUX4L3P0CJ86 424 aa16.78■□□□□ 0.28
PDLIM4-206ENST00000474421 DUX4L4P0CJ87 422 aa16.78■□□□□ 0.28
PDLIM4-206ENST00000474421 DUX4L5P0CJ88 424 aa16.78■□□□□ 0.28
PDLIM4-206ENST00000474421 DUX4L6P0CJ89 424 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms