RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 KLF14Q8TD94 323 aaPredicted RBP5.84□□□□□ -1.47
CKS1B-205ENST00000473344 ZNF431Q8TF32 576 aaPredicted RBP5.84□□□□□ -1.47
CKS1B-205ENST00000473344 FAM162AQ96A26 154 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 SGK3Q96BR1 496 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 PITX2Q99697 317 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 COPS4Q9BT78 406 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 PDCD10Q9BUL8 212 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 ZNF436Q9C0F3 470 aaPredicted RBP5.84□□□□□ -1.47
CKS1B-205ENST00000473344 OR2J1Q9GZK6 312 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 SLITRK2Q9H156 845 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 TMEM38AQ9H6F2 299 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 BIN3Q9NQY0 253 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 MMP26Q9NRE1 261 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 TMEM106BQ9NUM4 274 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 RBFOX1Q9NWB1 397 aaKnown RBP5.84□□□□□ -1.47
CKS1B-205ENST00000473344 OR5V1Q9UGF6 321 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 NUFIP1Q9UHK0 495 aaKnown RBP5.84□□□□□ -1.47
CKS1B-205ENST00000473344 CYB5R1Q9UHQ9 305 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 SLC7A7Q9UM01 511 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 ANGPT4Q9Y264 503 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 DYSFO75923 2080 aa5.84□□□□□ -1.47
CKS1B-205ENST00000473344 hCG_1807616A0A1W2PRN6 198 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 IRGMA1A4Y4 181 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 ELOVL7A1L3X0 281 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 ZNF98A6NK75 572 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 F8W036 122 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 TRAPPC2LH3BP13 241 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 CLDN34H7C241 214 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 H7C2Y5 167 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 GPANK1O95872 356 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 LALBAP00709 142 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 KNG1P01042 644 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 IL1AP01583 271 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 IGHV2-70P01814 119 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 S100A8P05109 93 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 F13BP05160 661 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 CRYBA1P05813 215 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 CDK1P06493 297 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 MMP7P09237 267 aaPredicted RBP5.83□□□□□ -1.48
CKS1B-205ENST00000473344 ANXA3P12429 323 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 NR2C1P13056 603 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 ZNF32P17041 273 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 MDKP21741 143 aaPredicted RBP5.83□□□□□ -1.48
CKS1B-205ENST00000473344 OMGP23515 440 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 PSMA1P25786 263 aaKnown RBP5.83□□□□□ -1.48
CKS1B-205ENST00000473344 NOS3P29474 1203 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 CDAP32320 146 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 TGFBR2P37173 567 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 MPV17P39210 176 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 SLC6A9P48067 706 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 PPP1CBP62140 327 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 POLR2GP62487 172 aaKnown RBP eCLIP5.83□□□□□ -1.48
CKS1B-205ENST00000473344 PPP3R1P63098 170 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 ERVK-25P63136 954 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 SLC9A3R2Q15599 337 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 SGCAQ16586 387 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 HIST3H3Q16695 136 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 MICAQ29983 383 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 TMEM155Q4W5P6 130 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 KLF17Q5JT82 389 aaPredicted RBP5.83□□□□□ -1.48
CKS1B-205ENST00000473344 LRIF1Q5T3J3 769 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 GPR139Q6DWJ6 353 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 TMEM65Q6PI78 240 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 ZNF600Q6ZNG1 722 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 OVCH2Q7RTZ1 564 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 KRTAP19-1Q8IUB9 90 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 C10orf111Q8N326 155 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 ATG16L2Q8NAA4 619 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 CLRN3Q8NCR9 226 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 OR2T12Q8NG77 320 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 OR52E2Q8NGJ4 325 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 OR6T1Q8NGN1 323 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 AKR7LQ8NHP1 331 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 NSMAFQ92636 917 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 MARS2Q96GW9 593 aaKnown RBP5.83□□□□□ -1.48
CKS1B-205ENST00000473344 POM121L2Q96KW2 1035 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 Q96MT0 163 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 ZNF48Q96MX3 618 aaPredicted RBP5.83□□□□□ -1.48
CKS1B-205ENST00000473344 MNTQ99583 582 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 ARHGDIGQ99819 225 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 WFDC6Q9BQY6 131 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 RSPO3Q9BXY4 272 aaPredicted RBP5.83□□□□□ -1.48
CKS1B-205ENST00000473344 MED28Q9H204 178 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 ELOVL3Q9HB03 270 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 PATZ1Q9HBE1 687 aaKnown RBP5.83□□□□□ -1.48
CKS1B-205ENST00000473344 MSL2Q9HCI7 577 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 PPP1R14DQ9NXH3 145 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 RDH8Q9NYR8 311 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 SLC25A37Q9NYZ2 338 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 VAPAQ9P0L0 249 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 SLAMF8Q9P0V8 285 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 NDRG4Q9ULP0 352 aaKnown RBP5.83□□□□□ -1.48
CKS1B-205ENST00000473344 TBC1D24Q9ULP9 559 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 SSR3Q9UNL2 185 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 KCNK7Q9Y2U2 307 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 INSIG2Q9Y5U4 225 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 CMYA5Q8N3K9 4069 aa5.83□□□□□ -1.48
CKS1B-205ENST00000473344 VWFP04275 2813 aa5.82□□□□□ -1.48
CKS1B-205ENST00000473344 PRKDCP78527 4128 aaKnown RBP5.82□□□□□ -1.48
CKS1B-205ENST00000473344 LOC100509620A0A075B734 347 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms