RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 F8VVB4 439 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 F8VWA3 439 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.38□□□□□ -1.07
SF3A1-207ENST00000471342 LDLRAD4O15165 306 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 NCR1O76036 304 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 GOSR1O95249 250 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 CD55P08174 381 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 OCM2P0CE71 109 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 ATF1P18846 271 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 SRMP19623 302 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 CA6P23280 308 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 PSMA1P25786 263 aaKnown RBP8.38□□□□□ -1.07
SF3A1-207ENST00000471342 SDC2P34741 201 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 SERPINF1P36955 418 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 ALDH3B1P43353 468 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 LSM3P62310 102 aaKnown RBP8.38□□□□□ -1.07
SF3A1-207ENST00000471342 TLE4Q04727 773 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 MPPED2Q15777 294 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 ZNF718Q3SXZ3 478 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 C1orf100Q5SVJ3 147 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 ZNF787Q6DD87 383 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 ZNF544Q6NX49 715 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 GPR141Q7Z602 305 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 CALHM1Q8IU99 346 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 CLVS1Q8IUQ0 354 aaPredicted RBP8.38□□□□□ -1.07
SF3A1-207ENST00000471342 CCDC54Q8NEL0 328 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 DNAAF1Q8NEP3 725 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 Q8NFD4 153 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 PHYHIPQ92561 330 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 LRRC46Q96FV0 321 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 MYCBPQ99417 103 aaPredicted RBP8.38□□□□□ -1.07
SF3A1-207ENST00000471342 OR51I2Q9H344 312 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 OPA3Q9H6K4 179 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 SP140LQ9H930 580 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 NGBQ9NPG2 151 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 GPR173Q9NS66 373 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 GTF2A1LQ9UNN4 478 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 FOXJ3Q9UPW0 622 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 CMAHPQ9Y471 501 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 ARFGEF3Q5TH69 2177 aa8.38□□□□□ -1.07
SF3A1-207ENST00000471342 ZNF469Q96JG9 3925 aaPredicted RBP8.37□□□□□ -1.07
SF3A1-207ENST00000471342 ZNF816-ZNF321PA0A0X1KG74 233 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 A0A1B0GVI7 797 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 ZNF701M0R085 212 aaPredicted RBP8.37□□□□□ -1.07
SF3A1-207ENST00000471342 TNFRSF13BO14836 293 aaPredicted RBP8.37□□□□□ -1.07
SF3A1-207ENST00000471342 AIREO43918 545 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 NDUFS7O75251 213 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 FCN3O75636 299 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 NAT2P11245 290 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 AMY2BP19961 511 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 CFL1P23528 166 aaKnown RBP8.37□□□□□ -1.07
SF3A1-207ENST00000471342 MPZP25189 248 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 MAP2K3P46734 347 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 ERVK11-1P61568 191 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 RIPPLY1Q0D2K3 151 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 ZNF154Q13106 437 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 PRDX4Q13162 271 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 TRAM1Q15629 374 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 CEACAM21Q3KPI0 293 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 CLVS2Q5SYC1 327 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 MRPL21Q7Z2W9 205 aaKnown RBP8.37□□□□□ -1.07
SF3A1-207ENST00000471342 BHLHE23Q8NDY6 225 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 OR1M1Q8NGA1 313 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 OR5L1Q8NGL2 311 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 OR13C3Q8NGS6 347 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 SPACA5Q96QH8 159 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 SLIRPQ9GZT3 109 aaKnown RBP8.37□□□□□ -1.07
SF3A1-207ENST00000471342 NXF2Q9GZY0 626 aaKnown RBP8.37□□□□□ -1.07
SF3A1-207ENST00000471342 COMMD4Q9H0A8 199 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 TAAR3PQ9P1P4 343 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 DHDHQ9UQ10 334 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 APCP25054 2843 aa8.37□□□□□ -1.07
SF3A1-207ENST00000471342 TACC2O95359 2948 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 UNC79Q9P2D8 2635 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 SMIM31A0A1B0GVY4 71 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 A0A1W2PPW3 197 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 SMIM30A4D0T7 59 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 F5H5P2 479 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 CASKO14936 926 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 SLC22A1O15245 554 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 NRASP01111 189 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 LHBP01229 141 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 CALRP27797 417 aaKnown RBP8.36□□□□□ -1.07
SF3A1-207ENST00000471342 CD200P41217 278 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 MTNR1BP49286 362 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 KLF3P57682 345 aaPredicted RBP8.36□□□□□ -1.07
SF3A1-207ENST00000471342 MALLQ13021 153 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 RTN4RL2Q86UN3 420 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 ANGPTL5Q86XS5 388 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 KRTAP1-3Q8IUG1 177 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 SERPINA12Q8IW75 414 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 MUC15Q8N387 334 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 OR4D6Q8NGJ1 314 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 OR13C9Q8NGT0 318 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 ZNF420Q8TAQ5 688 aaPredicted RBP8.36□□□□□ -1.07
SF3A1-207ENST00000471342 PP6455Q8WZ26 134 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 PIGCQ92535 297 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 BCL7BQ9BQE9 202 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 CNTD2Q9H8S5 307 aa8.36□□□□□ -1.07
SF3A1-207ENST00000471342 NKIRAS2Q9NYR9 191 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms