RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 TGM4P49221 684 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 GYS2P54840 703 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 DEFA6Q01524 100 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 LRRC10Q5BKY1 277 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 STUMQ69YW2 141 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 DUX4L9Q6RFH8 374 aaPredicted RBP14.4□□□□□ -0.1
COL7A1-208ENST00000470076 PDZD9Q8IXQ8 264 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 FGFRL1Q8N441 504 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 PIP4P2Q8N4L2 257 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 FAM216BQ8N7L0 139 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 ZNF454Q8N9F8 522 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 OR10Z1Q8NGY1 313 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 OTOSQ8NHW6 89 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 NPRL2Q8WTW4 380 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 LRTOMTQ8WZ04 291 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 OR51V1Q9H2C8 321 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 DPAGT1Q9H3H5 408 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 PPP1R3EQ9H7J1 279 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 HAO2Q9NYQ3 351 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 PDP1Q9P0J1 537 aaPredicted RBP14.4□□□□□ -0.1
COL7A1-208ENST00000470076 DUX4Q9UBX2 424 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 FAM96BQ9Y3D0 163 aa14.4□□□□□ -0.1
COL7A1-208ENST00000470076 TMEM210A6NLX4 147 aa14.39□□□□□ -0.11
COL7A1-208ENST00000470076 PRR23D1E9PI22 279 aaPredicted RBP14.39□□□□□ -0.11
COL7A1-208ENST00000470076 CST1P01037 141 aa14.39□□□□□ -0.11
COL7A1-208ENST00000470076 PRR23D2P0DMB1 279 aaPredicted RBP14.39□□□□□ -0.11
COL7A1-208ENST00000470076 ELF3P78545 371 aaPredicted RBP14.39□□□□□ -0.11
COL7A1-208ENST00000470076 GUCA2AQ02747 115 aa14.39□□□□□ -0.11
COL7A1-208ENST00000470076 PRDX4Q13162 271 aa14.39□□□□□ -0.11
COL7A1-208ENST00000470076 PDLIM3Q53GG5 364 aaPredicted RBP14.39□□□□□ -0.11
COL7A1-208ENST00000470076 GDPGP1Q6ZNW5 385 aa14.39□□□□□ -0.11
COL7A1-208ENST00000470076 ASB9Q96DX5 294 aa14.39□□□□□ -0.11
COL7A1-208ENST00000470076 SEH1LQ96EE3 360 aa14.39□□□□□ -0.11
COL7A1-208ENST00000470076 LRGUKQ96M69 825 aa14.39□□□□□ -0.11
COL7A1-208ENST00000470076 DCTN5Q9BTE1 182 aa14.39□□□□□ -0.11
COL7A1-208ENST00000470076 DNAJB11Q9UBS4 358 aa14.39□□□□□ -0.11
COL7A1-208ENST00000470076 ZNF391Q9UJN7 358 aa14.39□□□□□ -0.11
COL7A1-208ENST00000470076 RNF114Q9Y508 228 aa14.39□□□□□ -0.11
COL7A1-208ENST00000470076 ZNF850A8MQ14 1090 aa14.38□□□□□ -0.11
COL7A1-208ENST00000470076 M0QZ24 198 aa14.38□□□□□ -0.11
COL7A1-208ENST00000470076 TIMM23O14925 209 aa14.38□□□□□ -0.11
COL7A1-208ENST00000470076 PRODHO43272 600 aa14.38□□□□□ -0.11
COL7A1-208ENST00000470076 CST4P01036 141 aa14.38□□□□□ -0.11
COL7A1-208ENST00000470076 FBP1P09467 338 aa14.38□□□□□ -0.11
COL7A1-208ENST00000470076 AMY2BP19961 511 aa14.38□□□□□ -0.11
COL7A1-208ENST00000470076 CALB2P22676 271 aa14.38□□□□□ -0.11
COL7A1-208ENST00000470076 EEF1B2P24534 225 aaKnown RBP14.38□□□□□ -0.11
COL7A1-208ENST00000470076 IKZF1Q13422 519 aa14.38□□□□□ -0.11
COL7A1-208ENST00000470076 PLBD1Q6P4A8 553 aa14.38□□□□□ -0.11
COL7A1-208ENST00000470076 OR5T2Q8NGG2 359 aa14.38□□□□□ -0.11
COL7A1-208ENST00000470076 LINC01006Q8NI28 216 aa14.38□□□□□ -0.11
COL7A1-208ENST00000470076 C8orf46Q8TAG6 207 aa14.38□□□□□ -0.11
COL7A1-208ENST00000470076 THEM6Q8WUY1 208 aa14.38□□□□□ -0.11
COL7A1-208ENST00000470076 OR5P3Q8WZ94 311 aa14.38□□□□□ -0.11
COL7A1-208ENST00000470076 RAB3IPQ96QF0 476 aaPredicted RBP14.38□□□□□ -0.11
COL7A1-208ENST00000470076 CCT8L2Q96SF2 557 aa14.38□□□□□ -0.11
COL7A1-208ENST00000470076 PKP2Q99959 881 aa14.38□□□□□ -0.11
COL7A1-208ENST00000470076 CHID1Q9BWS9 393 aa14.38□□□□□ -0.11
COL7A1-208ENST00000470076 NIPAL2Q9H841 368 aa14.38□□□□□ -0.11
COL7A1-208ENST00000470076 SIRT7Q9NRC8 400 aa14.38□□□□□ -0.11
COL7A1-208ENST00000470076 NKX6-3A6NJ46 265 aa14.37□□□□□ -0.11
COL7A1-208ENST00000470076 SELENOFO60613 162 aa14.37□□□□□ -0.11
COL7A1-208ENST00000470076 HMGN1P05114 100 aa14.37□□□□□ -0.11
COL7A1-208ENST00000470076 ACKR3P25106 362 aa14.37□□□□□ -0.11
COL7A1-208ENST00000470076 POU1F1P28069 291 aa14.37□□□□□ -0.11
COL7A1-208ENST00000470076 PSMA6P60900 246 aaKnown RBP14.37□□□□□ -0.11
COL7A1-208ENST00000470076 GINS1Q14691 196 aa14.37□□□□□ -0.11
COL7A1-208ENST00000470076 MIDNQ504T8 468 aa14.37□□□□□ -0.11
COL7A1-208ENST00000470076 FAM76BQ5HYJ3 339 aa14.37□□□□□ -0.11
COL7A1-208ENST00000470076 PIGCQ92535 297 aa14.37□□□□□ -0.11
COL7A1-208ENST00000470076 RPL3LQ92901 407 aaKnown RBP14.37□□□□□ -0.11
COL7A1-208ENST00000470076 MED30Q96HR3 178 aa14.37□□□□□ -0.11
COL7A1-208ENST00000470076 RNF170Q96K19 258 aa14.37□□□□□ -0.11
COL7A1-208ENST00000470076 WDR13Q9H1Z4 485 aa14.37□□□□□ -0.11
COL7A1-208ENST00000470076 ZNRD1Q9P1U0 126 aa14.37□□□□□ -0.11
COL7A1-208ENST00000470076 BTBD17A6NE02 478 aa14.36□□□□□ -0.11
COL7A1-208ENST00000470076 GNGT2O14610 69 aa14.36□□□□□ -0.11
COL7A1-208ENST00000470076 CLPXO76031 633 aa14.36□□□□□ -0.11
COL7A1-208ENST00000470076 HOXB6P17509 224 aaKnown RBP14.36□□□□□ -0.11
COL7A1-208ENST00000470076 GMFBP60983 142 aa14.36□□□□□ -0.11
COL7A1-208ENST00000470076 SLC35D3Q5M8T2 416 aa14.36□□□□□ -0.11
COL7A1-208ENST00000470076 ZNF788Q6ZQV5 615 aa14.36□□□□□ -0.11
COL7A1-208ENST00000470076 C1orf122Q6ZSJ8 110 aa14.36□□□□□ -0.11
COL7A1-208ENST00000470076 KCTD8Q6ZWB6 473 aa14.36□□□□□ -0.11
COL7A1-208ENST00000470076 ZDHHC23Q8IYP9 409 aa14.36□□□□□ -0.11
COL7A1-208ENST00000470076 ADGRG5Q8IZF4 528 aa14.36□□□□□ -0.11
COL7A1-208ENST00000470076 Q8N7P7 452 aa14.36□□□□□ -0.11
COL7A1-208ENST00000470076 ZSCAN4Q8NAM6 433 aaPredicted RBP14.36□□□□□ -0.11
COL7A1-208ENST00000470076 PAPD5Q8NDF8 572 aaKnown RBP14.36□□□□□ -0.11
COL7A1-208ENST00000470076 H1FXQ92522 213 aaKnown RBP14.36□□□□□ -0.11
COL7A1-208ENST00000470076 ITFG2Q969R8 447 aa14.36□□□□□ -0.11
COL7A1-208ENST00000470076 CCDC124Q96CT7 223 aaKnown RBP14.36□□□□□ -0.11
COL7A1-208ENST00000470076 HIST1H2AAQ96QV6 131 aa14.36□□□□□ -0.11
COL7A1-208ENST00000470076 MMP27Q9H306 513 aa14.36□□□□□ -0.11
COL7A1-208ENST00000470076 SNTG1Q9NSN8 517 aa14.36□□□□□ -0.11
COL7A1-208ENST00000470076 RNASEK-C17orf49H0YIS7 233 aa14.35□□□□□ -0.11
COL7A1-208ENST00000470076 NPFFO15130 113 aa14.35□□□□□ -0.11
COL7A1-208ENST00000470076 AKR7A2O43488 359 aa14.35□□□□□ -0.11
COL7A1-208ENST00000470076 OSMP13725 252 aa14.35□□□□□ -0.11
COL7A1-208ENST00000470076 SELLP14151 372 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms