RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 METTL21EPA6NDL7 271 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 TMEM14DPA8MWL7 114 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 HOXD4P09016 255 aaPredicted RBP15.67■□□□□ 0.1
SMC4-211ENST00000469858 PTGFRP43088 359 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 BEND4Q6ZU67 534 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 RFPL4BQ6ZWI9 263 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 TMEM104Q8NE00 496 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 UBASH3BQ8TF42 649 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 TNFAIP8L1Q8WVP5 186 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 C1QTNF6Q9BXI9 259 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 TP63Q9H3D4 680 aaPredicted RBP15.67■□□□□ 0.1
SMC4-211ENST00000469858 MRPL15Q9P015 296 aaKnown RBP15.67■□□□□ 0.1
SMC4-211ENST00000469858 KCNN3Q9UGI6 736 aa15.67■□□□□ 0.1
SMC4-211ENST00000469858 HOXB1P14653 301 aaPredicted RBP15.66■□□□□ 0.1
SMC4-211ENST00000469858 RANBP1P43487 201 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 MTCP1P56278 107 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 P2RY6Q15077 328 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 SLC22A6Q4U2R8 563 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 PLCXD3Q63HM9 321 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 OR2W3Q7Z3T1 314 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 C1QL2Q7Z5L3 287 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 DOLPP1Q86YN1 238 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 WDR31Q8NA23 367 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 NLKQ9UBE8 527 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 TUBD1Q9UJT1 453 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 A0A1W2PP11 408 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 AGFG2O95081 481 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 MPIG6BO95866 241 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 GLI4P10075 376 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 PRKACBP22694 351 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 GUCA2AQ02747 115 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 KLF9Q13886 244 aaPredicted RBP15.66■□□□□ 0.1
SMC4-211ENST00000469858 MOB3CQ70IA8 216 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 CADM3Q8N126 398 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 KCNG3Q8TAE7 436 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 BORCS8Q96FH0 119 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 ZC3HAV1LQ96H79 300 aaKnown RBP15.66■□□□□ 0.1
SMC4-211ENST00000469858 BOD1Q96IK1 185 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 PAPOLGQ9BWT3 736 aaKnown RBP15.66■□□□□ 0.1
SMC4-211ENST00000469858 BANF2Q9H503 90 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 ZMAT3Q9HA38 289 aaKnown RBP15.66■□□□□ 0.1
SMC4-211ENST00000469858 CDH20Q9HBT6 801 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 NEK6Q9HC98 313 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 FBLN5Q9UBX5 448 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 TINAGQ9UJW2 476 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 ING4Q9UNL4 249 aa15.66■□□□□ 0.1
SMC4-211ENST00000469858 RBMX2Q9Y388 322 aaKnown RBP15.66■□□□□ 0.1
SMC4-211ENST00000469858 A0A0A6YYH2 397 aa15.65■□□□□ 0.1
SMC4-211ENST00000469858 A6NJ64 397 aa15.65■□□□□ 0.1
SMC4-211ENST00000469858 CRTAPO75718 401 aaPredicted RBP15.65■□□□□ 0.1
SMC4-211ENST00000469858 UBBP0CG47 229 aa15.65■□□□□ 0.1
SMC4-211ENST00000469858 CEACAM8P31997 349 aaPredicted RBP15.65■□□□□ 0.1
SMC4-211ENST00000469858 ZBTB37Q5TC79 503 aa15.65■□□□□ 0.1
SMC4-211ENST00000469858 UNQ6494/PRO21346Q6UXR6 183 aa15.65■□□□□ 0.1
SMC4-211ENST00000469858 BHLHA15Q7RTS1 189 aaPredicted RBP15.65■□□□□ 0.1
SMC4-211ENST00000469858 ITPKCQ96DU7 683 aa15.65■□□□□ 0.1
SMC4-211ENST00000469858 S100A13Q99584 98 aa15.65■□□□□ 0.1
SMC4-211ENST00000469858 SFXN3Q9BWM7 321 aa15.65■□□□□ 0.1
SMC4-211ENST00000469858 TMEM59Q9BXS4 323 aa15.65■□□□□ 0.1
SMC4-211ENST00000469858 SH3BGRL2Q9UJC5 107 aa15.65■□□□□ 0.1
SMC4-211ENST00000469858 IGKV1-27A0A075B6S5 117 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 ZNF850A8MQ14 1090 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 CENPXA8MT69 81 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 RAB27BO00194 218 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 CDC14BO60729 498 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 SLC34A2O95436 690 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 PLATP00750 562 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 FAM157BP0CG42 384 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 CBR1P16152 277 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 PRSS3P35030 304 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 VEGFCP49767 419 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 MRPL49Q13405 166 aaKnown RBP15.64■□□□□ 0.09
SMC4-211ENST00000469858 PLET1Q6UQ28 207 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 LHFPL2Q6ZUX7 228 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 C17orf78Q8N4C9 275 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 OR5L1Q8NGL2 311 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 ZCCHC14Q8WYQ9 949 aaKnown RBP15.64■□□□□ 0.09
SMC4-211ENST00000469858 CMBLQ96DG6 245 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 CPNE2Q96FN4 548 aaPredicted RBP15.64■□□□□ 0.09
SMC4-211ENST00000469858 RNF170Q96K19 258 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 NICN1Q9BSH3 213 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 OPA3Q9H6K4 179 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 ELL3Q9HB65 397 aaPredicted RBP15.64■□□□□ 0.09
SMC4-211ENST00000469858 GPR160Q9UJ42 338 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 SLC7A11Q9UPY5 501 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 NAT2P11245 290 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 RBP2P50120 134 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 SPATA46Q5T0L3 261 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 RAB12Q6IQ22 244 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 ZNF474Q6S9Z5 364 aaPredicted RBP15.64■□□□□ 0.09
SMC4-211ENST00000469858 CHST4Q8NCG5 386 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 OR10K1Q8NGX5 313 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 CST11Q9H112 138 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 LPAR5Q9H1C0 372 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 EIF3KQ9UBQ5 218 aaKnown RBP15.64■□□□□ 0.09
SMC4-211ENST00000469858 GHRLQ9UBU3 117 aa15.64■□□□□ 0.09
SMC4-211ENST00000469858 PRR14LQ5THK1 2151 aa15.63■□□□□ 0.09
SMC4-211ENST00000469858 MEIS3P1A6NDR6 274 aa15.63■□□□□ 0.09
SMC4-211ENST00000469858 ECDO95905 644 aaPredicted RBP15.63■□□□□ 0.09
SMC4-211ENST00000469858 IGKV3-15P01624 115 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms