RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 LINC00854A0A1B0GVQ3 168 aa15.18■□□□□ 0.02
MRPL28-208ENST00000469744 PGA4P0DJD7 388 aa15.18■□□□□ 0.02
MRPL28-208ENST00000469744 PGA3P0DJD8 388 aa15.18■□□□□ 0.02
MRPL28-208ENST00000469744 LAP3P28838 519 aa15.18■□□□□ 0.02
MRPL28-208ENST00000469744 MNDAP41218 407 aa15.18■□□□□ 0.02
MRPL28-208ENST00000469744 CLRN1P58418 232 aa15.18■□□□□ 0.02
MRPL28-208ENST00000469744 KCNMB1Q16558 191 aa15.18■□□□□ 0.02
MRPL28-208ENST00000469744 HIST3H3Q16695 136 aa15.18■□□□□ 0.02
MRPL28-208ENST00000469744 SLC25A47Q6Q0C1 308 aa15.18■□□□□ 0.02
MRPL28-208ENST00000469744 PLET1Q6UQ28 207 aa15.18■□□□□ 0.02
MRPL28-208ENST00000469744 RHOUQ7L0Q8 258 aa15.18■□□□□ 0.02
MRPL28-208ENST00000469744 RNF133Q8WVZ7 376 aa15.18■□□□□ 0.02
MRPL28-208ENST00000469744 ABHD1Q96SE0 405 aa15.18■□□□□ 0.02
MRPL28-208ENST00000469744 C7orf50Q9BRJ6 194 aaKnown RBP15.18■□□□□ 0.02
MRPL28-208ENST00000469744 HDHD2Q9H0R4 259 aa15.18■□□□□ 0.02
MRPL28-208ENST00000469744 FOXJ3Q9UPW0 622 aa15.18■□□□□ 0.02
MRPL28-208ENST00000469744 ABCA2Q9BZC7 2435 aa15.18■□□□□ 0.02
MRPL28-208ENST00000469744 JMJD1CQ15652 2540 aa15.17■□□□□ 0.02
MRPL28-208ENST00000469744 MEIOCA2RUB1 952 aa15.17■□□□□ 0.02
MRPL28-208ENST00000469744 HMX3A6NHT5 357 aa15.17■□□□□ 0.02
MRPL28-208ENST00000469744 CD37P11049 281 aa15.17■□□□□ 0.02
MRPL28-208ENST00000469744 ACHEP22303 614 aa15.17■□□□□ 0.02
MRPL28-208ENST00000469744 CALCRP30988 508 aa15.17■□□□□ 0.02
MRPL28-208ENST00000469744 SOX2P48431 317 aa15.17■□□□□ 0.02
MRPL28-208ENST00000469744 IDH3GP51553 393 aaPredicted RBP15.17■□□□□ 0.02
MRPL28-208ENST00000469744 NAAAQ02083 359 aa15.17■□□□□ 0.02
MRPL28-208ENST00000469744 FMODQ06828 376 aa15.17■□□□□ 0.02
MRPL28-208ENST00000469744 C1QTNF12Q5T7M4 302 aa15.17■□□□□ 0.02
MRPL28-208ENST00000469744 ZNF57Q68EA5 555 aaPredicted RBP15.17■□□□□ 0.02
MRPL28-208ENST00000469744 OR6N1Q8NGY5 312 aa15.17■□□□□ 0.02
MRPL28-208ENST00000469744 C11orf40Q8WZ69 217 aa15.17■□□□□ 0.02
MRPL28-208ENST00000469744 TMEM106AQ96A25 262 aa15.17■□□□□ 0.02
MRPL28-208ENST00000469744 FBXO17Q96EF6 278 aa15.17■□□□□ 0.02
MRPL28-208ENST00000469744 FOXN4Q96NZ1 517 aa15.17■□□□□ 0.02
MRPL28-208ENST00000469744 ABCA1O95477 2261 aa15.16■□□□□ 0.02
MRPL28-208ENST00000469744 IGKV1D-43A0A0B4J1Z2 117 aa15.16■□□□□ 0.02
MRPL28-208ENST00000469744 FAM240BA0A1B0GVZ2 78 aa15.16■□□□□ 0.02
MRPL28-208ENST00000469744 ZNF726A6NNF4 738 aa15.16■□□□□ 0.02
MRPL28-208ENST00000469744 MPZL1O95297 269 aa15.16■□□□□ 0.02
MRPL28-208ENST00000469744 PNPP00491 289 aa15.16■□□□□ 0.02
MRPL28-208ENST00000469744 IGLV1-44P01699 117 aa15.16■□□□□ 0.02
MRPL28-208ENST00000469744 CRYAAP02489 173 aa15.16■□□□□ 0.02
MRPL28-208ENST00000469744 ADRA2CP18825 462 aa15.16■□□□□ 0.02
MRPL28-208ENST00000469744 FSTP19883 344 aa15.16■□□□□ 0.02
MRPL28-208ENST00000469744 HLA-DMAP28067 261 aa15.16■□□□□ 0.02
MRPL28-208ENST00000469744 APOBEC3AP31941 199 aaPredicted RBP15.16■□□□□ 0.02
MRPL28-208ENST00000469744 EIF2B2P49770 351 aaKnown RBP15.16■□□□□ 0.02
MRPL28-208ENST00000469744 HES5Q5TA89 166 aa15.16■□□□□ 0.02
MRPL28-208ENST00000469744 TMEM244Q5VVB8 128 aa15.16■□□□□ 0.02
MRPL28-208ENST00000469744 VHLLQ6RSH7 139 aa15.16■□□□□ 0.02
MRPL28-208ENST00000469744 DCXRQ7Z4W1 244 aa15.16■□□□□ 0.02
MRPL28-208ENST00000469744 MDP1Q86V88 176 aa15.16■□□□□ 0.02
MRPL28-208ENST00000469744 CMTM4Q8IZR5 234 aa15.16■□□□□ 0.02
MRPL28-208ENST00000469744 REG4Q9BYZ8 158 aa15.16■□□□□ 0.02
MRPL28-208ENST00000469744 ULBP2Q9BZM5 246 aa15.16■□□□□ 0.02
MRPL28-208ENST00000469744 PLEKHA1Q9HB21 404 aa15.16■□□□□ 0.02
MRPL28-208ENST00000469744 BARX1Q9HBU1 254 aaPredicted RBP15.16■□□□□ 0.02
MRPL28-208ENST00000469744 NOX3Q9HBY0 568 aa15.16■□□□□ 0.02
MRPL28-208ENST00000469744 CYB5R1Q9UHQ9 305 aa15.16■□□□□ 0.02
MRPL28-208ENST00000469744 ANXA2P2A6NMY6 339 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 LY6HO94772 140 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 IGKV3-15P01624 115 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 HLA-HP01893 362 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 CD2P06729 351 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 ANXA2P07355 339 aaKnown RBP15.15■□□□□ 0.02
MRPL28-208ENST00000469744 B4GALT1P15291 398 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 MAGEB1P43366 347 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 MMP16P51512 607 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 ZNF133P52736 654 aaPredicted RBP15.15■□□□□ 0.02
MRPL28-208ENST00000469744 TPTEP56180 551 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 MRPS10P82664 201 aaKnown RBP15.15■□□□□ 0.02
MRPL28-208ENST00000469744 MADCAM1Q13477 382 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 RAB35Q15286 201 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 ZNF813Q6ZN06 617 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 DNM1P46Q6ZS02 220 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.15■□□□□ 0.02
MRPL28-208ENST00000469744 TSEN15Q8WW01 171 aaKnown RBP15.15■□□□□ 0.02
MRPL28-208ENST00000469744 YIPF5Q969M3 257 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 MARVELD1Q9BSK0 173 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 MMP28Q9H239 520 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 C1orf198Q9H425 327 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 NIPAL2Q9H841 368 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 OR5V1Q9UGF6 321 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 OR52A1Q9UKL2 312 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 HHLA2Q9UM44 414 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 DHDHQ9UQ10 334 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 SLC22A13Q9Y226 551 aa15.15■□□□□ 0.02
MRPL28-208ENST00000469744 A0A0B4J203 849 aa15.14■□□□□ 0.01
MRPL28-208ENST00000469744 MEGF11A6BM72 1044 aa15.14■□□□□ 0.01
MRPL28-208ENST00000469744 CENPXA8MT69 81 aa15.14■□□□□ 0.01
MRPL28-208ENST00000469744 H2BFMP0C1H6 154 aa15.14■□□□□ 0.01
MRPL28-208ENST00000469744 UBCP0CG48 685 aaKnown RBP15.14■□□□□ 0.01
MRPL28-208ENST00000469744 HOXB1P14653 301 aaPredicted RBP15.14■□□□□ 0.01
MRPL28-208ENST00000469744 CBR1P16152 277 aa15.14■□□□□ 0.01
MRPL28-208ENST00000469744 CSNK1A1P48729 337 aa15.14■□□□□ 0.01
MRPL28-208ENST00000469744 BTG1P62324 171 aa15.14■□□□□ 0.01
MRPL28-208ENST00000469744 KRTAP1-1Q07627 177 aa15.14■□□□□ 0.01
MRPL28-208ENST00000469744 MFGE8Q08431 387 aaPredicted RBP15.14■□□□□ 0.01
MRPL28-208ENST00000469744 GPR176Q14439 515 aa15.14■□□□□ 0.01
MRPL28-208ENST00000469744 MST1LQ2TV78 715 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms