RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 C5orf66Q9H5L9 145 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 TNFSF18Q9UNG2 199 aa12.86□□□□□ -0.35
CBWD3-205ENST00000469687 LGALS8O00214 317 aa12.85□□□□□ -0.35
CBWD3-205ENST00000469687 SDCBPO00560 298 aaPredicted RBP12.85□□□□□ -0.35
CBWD3-205ENST00000469687 FCGR2AP12318 317 aa12.85□□□□□ -0.35
CBWD3-205ENST00000469687 MGMTP16455 207 aa12.85□□□□□ -0.35
CBWD3-205ENST00000469687 ARPC4P59998 168 aa12.85□□□□□ -0.35
CBWD3-205ENST00000469687 ARFRP1Q13795 201 aa12.85□□□□□ -0.35
CBWD3-205ENST00000469687 CCDC157Q569K6 752 aa12.85□□□□□ -0.35
CBWD3-205ENST00000469687 GGNQ86UU5 652 aa12.85□□□□□ -0.35
CBWD3-205ENST00000469687 C20orf196Q8IYI0 205 aa12.85□□□□□ -0.35
CBWD3-205ENST00000469687 OR5M9Q8NGP3 310 aa12.85□□□□□ -0.35
CBWD3-205ENST00000469687 TERB2Q8NHR7 220 aa12.85□□□□□ -0.35
CBWD3-205ENST00000469687 ROBO4Q8WZ75 1007 aa12.85□□□□□ -0.35
CBWD3-205ENST00000469687 ST8SIA2Q92186 375 aa12.85□□□□□ -0.35
CBWD3-205ENST00000469687 TMEM230Q96A57 120 aa12.85□□□□□ -0.35
CBWD3-205ENST00000469687 ZNF75AQ96N20 296 aa12.85□□□□□ -0.35
CBWD3-205ENST00000469687 DHRS9Q9BPW9 319 aa12.85□□□□□ -0.35
CBWD3-205ENST00000469687 COMMD9Q9P000 198 aa12.85□□□□□ -0.35
CBWD3-205ENST00000469687 AHCTF1Q8WYP5 2266 aa12.85□□□□□ -0.35
CBWD3-205ENST00000469687 FREM1Q5H8C1 2179 aa12.85□□□□□ -0.35
CBWD3-205ENST00000469687 CCDC187A0A096LP49 1063 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 FOXI3A8MTJ6 420 aaPredicted RBP12.84□□□□□ -0.35
CBWD3-205ENST00000469687 HTR3BO95264 441 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 HPNP05981 417 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 NAT2P11245 290 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 HLA-GP17693 338 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 TBPP20226 339 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 ACKR3P25106 362 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 BLVRBP30043 206 aaPredicted RBP12.84□□□□□ -0.35
CBWD3-205ENST00000469687 THBS4P35443 961 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 SUCLG1P53597 346 aaKnown RBP12.84□□□□□ -0.35
CBWD3-205ENST00000469687 FGL1Q08830 312 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 TIPARPQ7Z3E1 657 aaKnown RBP12.84□□□□□ -0.35
CBWD3-205ENST00000469687 FAM89BQ8N5H3 189 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 TMEM105Q8N8V8 129 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 PNLDC1Q8NA58 520 aaKnown RBP12.84□□□□□ -0.35
CBWD3-205ENST00000469687 OR14L1PQ8NHC6 308 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 ALKBH3Q96Q83 286 aaPredicted RBP12.84□□□□□ -0.35
CBWD3-205ENST00000469687 VRK1Q99986 396 aaPredicted RBP12.84□□□□□ -0.35
CBWD3-205ENST00000469687 URM1Q9BTM9 101 aaKnown RBP12.84□□□□□ -0.35
CBWD3-205ENST00000469687 CHST5Q9GZS9 411 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 ELL3Q9HB65 397 aaPredicted RBP12.84□□□□□ -0.35
CBWD3-205ENST00000469687 CRLF2Q9HC73 371 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 ARID1AO14497 2285 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 LRRC3CA6NJW4 275 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 DUS4LO95620 317 aaKnown RBP12.84□□□□□ -0.35
CBWD3-205ENST00000469687 AGTR1P30556 359 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 VAX1Q5SQQ9 334 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 ZNF774Q6NX45 483 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 FAHD2BQ6P2I3 314 aaPredicted RBP12.84□□□□□ -0.35
CBWD3-205ENST00000469687 C1orf210Q8IVY1 113 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 SLC38A6Q8IZM9 456 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 KCNRGQ8N5I3 272 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 SGK3Q96BR1 496 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 FAHD2AQ96GK7 314 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 OCSTAMPQ9BR26 566 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 GPR173Q9NS66 373 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 DEPPQ9NTK1 212 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 MBD2Q9UBB5 411 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 TCFL5Q9UL49 500 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 FLVCR1Q9Y5Y0 555 aa12.84□□□□□ -0.35
CBWD3-205ENST00000469687 C13orf42A0A1B0GVH6 325 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 PINLYPA6NC86 204 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 DBX1A6NMT0 343 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 P04436 131 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 SLC25A4P12235 298 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 B4GALT1P15291 398 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 AMY2BP19961 511 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 TCN2P20062 427 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 DLSTP36957 453 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 ZNF84P51523 738 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 LUMP51884 338 aaPredicted RBP12.83□□□□□ -0.36
CBWD3-205ENST00000469687 SLC9A3R2Q15599 337 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 WIPI1Q5MNZ9 446 aaPredicted RBP12.83□□□□□ -0.36
CBWD3-205ENST00000469687 FAM27BQ5VT28 67 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 FAM219AQ8IW50 185 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 ARMC10Q8N2F6 343 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 ESX1Q8N693 406 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 OR13G1Q8NGZ3 307 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 SGCZQ96LD1 299 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 ZNF581Q9P0T4 197 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 NUP50Q9UKX7 468 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 GPR132Q9UNW8 380 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 PCDHGA1Q9Y5H4 931 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 MPTX1A8MV57 137 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 CXCL13O43927 109 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 UBBP0CG47 229 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 CRYGSP22914 178 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 SRD5A2P31213 254 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 SERPINF1P36955 418 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 SNU13P55769 128 aaKnown RBP12.83□□□□□ -0.36
CBWD3-205ENST00000469687 CLDN15P56746 228 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 CARD18P57730 90 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 RAC3P60763 192 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 PNLIPRP3Q17RR3 467 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 SLC23A3Q6PIS1 610 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 OR5H2Q8NGV7 314 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 PECRQ9BY49 303 aa12.83□□□□□ -0.36
CBWD3-205ENST00000469687 GPR179Q6PRD1 2367 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms