RNA–Protein interactions for RNA: ENST00000469550.6

HDAC3-205, Transcript of histone deacetylase 3, humanhuman

TSL 1 (best)

Gene HDAC3, Length 1,952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-205ENST00000469550 SLC35D2Q76EJ3 337 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 ANGPTL5Q86XS5 388 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 PLXDC1Q8IUK5 500 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 ARRDC1Q8N5I2 433 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 OR4D6Q8NGJ1 314 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 OR51A2Q8NGJ7 313 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 OR13C3Q8NGS6 347 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 OR52N5Q8NH56 324 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 TERB2Q8NHR7 220 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 C16orf52Q8NHV5 167 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 ZNF519Q8TB69 540 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 PPP1R14AQ96A00 147 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 MALSU1Q96EH3 234 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 C14orf79Q96F83 325 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 KIRREL1Q96J84 757 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 SCGB3A2Q96PL1 93 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 ABHD6Q9BV23 337 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 FN3KRPQ9HA64 309 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 PDE7BQ9NP56 450 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 DHCR7Q9UBM7 475 aaKnown RBP8.48□□□□□ -1.05
HDAC3-205ENST00000469550 GPR132Q9UNW8 380 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 TRBV23OR9-2A0A075B6M9 112 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 A0A0J9YY10 115 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 MSGN1A6NI15 193 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 HRKO00198 91 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 NKX2-8O15522 239 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 KCNAB3O43448 404 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 MT-ATP6P00846 226 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 IGHV2-70P01814 119 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 IGHV2-5P01817 119 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 HLA-DQA2P01906 255 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 BGLAPP02818 100 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 CHRM2P08172 466 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 SPARCP09486 303 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 GALNSP34059 522 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 LPAR6P43657 344 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 SLC6A8P48029 635 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 RPL27P61353 136 aaKnown RBP8.48□□□□□ -1.05
HDAC3-205ENST00000469550 SPOCK1Q08629 439 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 CD226Q15762 336 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 NSUN5P2Q63ZY6 315 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 OR52W1Q6IF63 320 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 DEGS2Q6QHC5 323 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 RBMS3Q6XE24 437 aaKnown RBP8.48□□□□□ -1.05
HDAC3-205ENST00000469550 ZNF600Q6ZNG1 722 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 KDM8Q8N371 416 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 ARHGEF39Q8N4T4 335 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 COMMD1Q8N668 190 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 GVQW1Q8N7I0 195 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 ZNF615Q8N8J6 731 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 ACBD4Q8NC06 268 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 TAAR8Q969N4 342 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 C2orf50Q96LR7 162 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 GAL3ST1Q99999 423 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 SULT4A1Q9BR01 284 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 RAB33BQ9H082 229 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 OR10A5Q9H207 317 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 SEMA5BQ9P283 1151 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 PRODH2Q9UF12 536 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 LRP12Q9Y561 859 aa8.48□□□□□ -1.05
HDAC3-205ENST00000469550 HECTD1Q9ULT8 2610 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 TRAV36DV7A0A075B6V5 113 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 LOC100509620A0A075B734 347 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 TGFBR3LH3BV60 316 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 OIP5O43482 229 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 CST4P01036 141 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 IGHMP01871 453 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 GAPDHP04406 335 aaKnown RBP8.47□□□□□ -1.05
HDAC3-205ENST00000469550 RNH1P13489 461 aaKnown RBP8.47□□□□□ -1.05
HDAC3-205ENST00000469550 ADH6P28332 368 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 EIF2B1Q14232 305 aaKnown RBP8.47□□□□□ -1.05
HDAC3-205ENST00000469550 IL11RAQ14626 422 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 ELAVL1Q15717 326 aaKnown RBP8.47□□□□□ -1.05
HDAC3-205ENST00000469550 DHRS11Q6UWP2 260 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 OR4K15Q8NH41 348 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 MARCH1Q8TCQ1 289 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 PHOSPHO1Q8TCT1 267 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 ADAMTS18Q8TE60 1221 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 TCTEX1D2Q8WW35 142 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 METTL21AQ8WXB1 218 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 DGAT2Q96PD7 388 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 CLCC1Q96S66 551 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 MAP3K3Q99759 626 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 NKX3-1Q99801 234 aaPredicted RBP8.47□□□□□ -1.05
HDAC3-205ENST00000469550 LAT2Q9GZY6 243 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 SLC26A1Q9H2B4 701 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 CNTD2Q9H8S5 307 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 G6PC2Q9NQR9 355 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 MIOXQ9UGB7 285 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 HEATR5AQ86XA9 2040 aa8.47□□□□□ -1.05
HDAC3-205ENST00000469550 LOC107986453A0A1B0GWG9 222 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 WRBO00258 174 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 SCDO00767 359 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 SSX5O60225 188 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 SLC16A7O60669 478 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 MED6O75586 246 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 IL33O95760 270 aa8.46□□□□□ -1.05
HDAC3-205ENST00000469550 PLGP00747 810 aaPredicted RBP8.46□□□□□ -1.05
HDAC3-205ENST00000469550 GSTP1P09211 210 aaKnown RBP8.46□□□□□ -1.05
HDAC3-205ENST00000469550 FGF5P12034 268 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms