RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 HHATQ5VTY9 493 aa0.21□□□□□ -2.38
SSB-208ENST00000468600 PMF1Q6P1K2 205 aa0.21□□□□□ -2.38
SSB-208ENST00000468600 RUFY3Q7L099 469 aa0.21□□□□□ -2.38
SSB-208ENST00000468600 TRMT10CQ7L0Y3 403 aaKnown RBP0.21□□□□□ -2.38
SSB-208ENST00000468600 PDPNQ86YL7 162 aa0.21□□□□□ -2.38
SSB-208ENST00000468600 OR10D4PQ8NGN7 298 aa0.21□□□□□ -2.38
SSB-208ENST00000468600 SYAP1Q96A49 352 aaPredicted RBP0.21□□□□□ -2.38
SSB-208ENST00000468600 TBL1XR1Q9BZK7 514 aa0.21□□□□□ -2.38
SSB-208ENST00000468600 SND1-IT1Q9HBX3 110 aa0.21□□□□□ -2.38
SSB-208ENST00000468600 PSMC3IPQ9P2W1 217 aaPredicted RBP0.21□□□□□ -2.38
SSB-208ENST00000468600 AP1M2Q9Y6Q5 423 aa0.21□□□□□ -2.38
SSB-208ENST00000468600 BRCA1P38398 1863 aaKnown RBP0.2□□□□□ -2.38
SSB-208ENST00000468600 SPAG6O75602 509 aa0.2□□□□□ -2.38
SSB-208ENST00000468600 B3GALNT1O75752 331 aa0.2□□□□□ -2.38
SSB-208ENST00000468600 IL1BP01584 269 aa0.2□□□□□ -2.38
SSB-208ENST00000468600 CSNK2A2P19784 350 aaPredicted RBP0.2□□□□□ -2.38
SSB-208ENST00000468600 BPIFB3P59826 476 aa0.2□□□□□ -2.38
SSB-208ENST00000468600 FOXF1Q12946 379 aa0.2□□□□□ -2.38
SSB-208ENST00000468600 ENDOGQ14249 297 aaKnown RBP0.2□□□□□ -2.38
SSB-208ENST00000468600 CMTM1Q8IZ96 169 aa0.2□□□□□ -2.38
SSB-208ENST00000468600 OR10W1Q8NGF6 305 aa0.2□□□□□ -2.38
SSB-208ENST00000468600 KIFAP3Q92845 792 aa0.2□□□□□ -2.38
SSB-208ENST00000468600 SNF8Q96H20 258 aa0.2□□□□□ -2.38
SSB-208ENST00000468600 API5Q9BZZ5 524 aaKnown RBP0.2□□□□□ -2.38
SSB-208ENST00000468600 CCDC88CQ9P219 2028 aa0.2□□□□□ -2.38
SSB-208ENST00000468600 ANXA5P08758 320 aa0.19□□□□□ -2.38
SSB-208ENST00000468600 RAB4AP20338 218 aa0.19□□□□□ -2.38
SSB-208ENST00000468600 GGT2P36268 569 aa0.19□□□□□ -2.38
SSB-208ENST00000468600 PPICP45877 212 aa0.19□□□□□ -2.38
SSB-208ENST00000468600 ERFP50548 548 aa0.19□□□□□ -2.38
SSB-208ENST00000468600 RPS15AP62244 130 aaKnown RBP0.19□□□□□ -2.38
SSB-208ENST00000468600 TRDNQ13061 729 aa0.19□□□□□ -2.38
SSB-208ENST00000468600 TRAM2Q15035 370 aa0.19□□□□□ -2.38
SSB-208ENST00000468600 MAPRE2Q15555 327 aa0.19□□□□□ -2.38
SSB-208ENST00000468600 TMEM236Q5W0B7 351 aa0.19□□□□□ -2.38
SSB-208ENST00000468600 OR52M1Q8NGK5 317 aa0.19□□□□□ -2.38
SSB-208ENST00000468600 SFXN5Q8TD22 340 aa0.19□□□□□ -2.38
SSB-208ENST00000468600 DERL3Q96Q80 235 aa0.19□□□□□ -2.38
SSB-208ENST00000468600 RETNLBQ9BQ08 111 aa0.19□□□□□ -2.38
SSB-208ENST00000468600 CYP3A43Q9HB55 503 aa0.19□□□□□ -2.38
SSB-208ENST00000468600 CCL26Q9Y258 94 aa0.19□□□□□ -2.38
SSB-208ENST00000468600 AMMECR1Q9Y4X0 333 aaPredicted RBP0.19□□□□□ -2.38
SSB-208ENST00000468600 SDK1Q7Z5N4 2213 aa0.19□□□□□ -2.38
SSB-208ENST00000468600 KNCNA6PVL3 124 aa0.18□□□□□ -2.38
SSB-208ENST00000468600 SIRPB1O00241 398 aa0.18□□□□□ -2.38
SSB-208ENST00000468600 NDUFAB1O14561 156 aa0.18□□□□□ -2.38
SSB-208ENST00000468600 CTAG2O75638 210 aa0.18□□□□□ -2.38
SSB-208ENST00000468600 POLR2FP61218 127 aaKnown RBP0.18□□□□□ -2.38
SSB-208ENST00000468600 RPL23AP62750 156 aaKnown RBP0.18□□□□□ -2.38
SSB-208ENST00000468600 CDC37Q16543 378 aaPredicted RBP0.18□□□□□ -2.38
SSB-208ENST00000468600 KRTAP21-1Q3LI58 79 aa0.18□□□□□ -2.38
SSB-208ENST00000468600 REEP3Q6NUK4 255 aa0.18□□□□□ -2.38
SSB-208ENST00000468600 ZYG11AQ6WRX3 759 aa0.18□□□□□ -2.38
SSB-208ENST00000468600 Q6ZRN7 208 aaPredicted RBP0.18□□□□□ -2.38
SSB-208ENST00000468600 APOBEC3DQ96AK3 386 aaPredicted RBP0.18□□□□□ -2.38
SSB-208ENST00000468600 ECHDC3Q96DC8 303 aa0.18□□□□□ -2.38
SSB-208ENST00000468600 SGTBQ96EQ0 304 aa0.18□□□□□ -2.38
SSB-208ENST00000468600 MRPL48Q96GC5 212 aaKnown RBP0.18□□□□□ -2.38
SSB-208ENST00000468600 Q96MT0 163 aa0.18□□□□□ -2.38
SSB-208ENST00000468600 ALS2CR12Q96Q35 445 aa0.18□□□□□ -2.38
SSB-208ENST00000468600 LRRC19Q9H756 370 aa0.18□□□□□ -2.38
SSB-208ENST00000468600 FAM206AQ9NX38 181 aa0.18□□□□□ -2.38
SSB-208ENST00000468600 GPR98Q8WXG9 6306 aa0.17□□□□□ -2.38
SSB-208ENST00000468600 GMNCA6NCL1 334 aa0.17□□□□□ -2.38
SSB-208ENST00000468600 SIGLEC16A6NMB1 481 aa0.17□□□□□ -2.38
SSB-208ENST00000468600 H7C0C1 242 aa0.17□□□□□ -2.38
SSB-208ENST00000468600 M0R3G1 203 aa0.17□□□□□ -2.38
SSB-208ENST00000468600 AP3B1O00203 1094 aa0.17□□□□□ -2.38
SSB-208ENST00000468600 GABRPO00591 440 aa0.17□□□□□ -2.38
SSB-208ENST00000468600 PTHLHP12272 177 aa0.17□□□□□ -2.38
SSB-208ENST00000468600 HOXB8P17481 243 aaPredicted RBP0.17□□□□□ -2.38
SSB-208ENST00000468600 TEAD1P28347 426 aa0.17□□□□□ -2.38
SSB-208ENST00000468600 OR1E1P30953 314 aa0.17□□□□□ -2.38
SSB-208ENST00000468600 ATP5OP48047 213 aa0.17□□□□□ -2.38
SSB-208ENST00000468600 FABP6P51161 128 aa0.17□□□□□ -2.38
SSB-208ENST00000468600 UBE2HP62256 183 aa0.17□□□□□ -2.38
SSB-208ENST00000468600 HADHQ16836 314 aaKnown RBP0.17□□□□□ -2.38
SSB-208ENST00000468600 TCF23Q7RTU1 214 aa0.17□□□□□ -2.38
SSB-208ENST00000468600 FANCEQ9HB96 536 aa0.17□□□□□ -2.38
SSB-208ENST00000468600 MRM3Q9HC36 420 aaKnown RBP0.17□□□□□ -2.38
SSB-208ENST00000468600 JCADQ9P266 1359 aa0.17□□□□□ -2.38
SSB-208ENST00000468600 CRB1P82279 1406 aa0.16□□□□□ -2.38
SSB-208ENST00000468600 A0A0G2JMP0 313 aa0.16□□□□□ -2.38
SSB-208ENST00000468600 A0A0X1KG70 313 aa0.16□□□□□ -2.38
SSB-208ENST00000468600 ZNF729A6NN14 1252 aaPredicted RBP0.16□□□□□ -2.38
SSB-208ENST00000468600 FFAR1O14842 300 aa0.16□□□□□ -2.38
SSB-208ENST00000468600 MTX2O75431 263 aa0.16□□□□□ -2.38
SSB-208ENST00000468600 GZMAP12544 262 aa0.16□□□□□ -2.38
SSB-208ENST00000468600 ZNF24P17028 368 aa0.16□□□□□ -2.38
SSB-208ENST00000468600 TNNI1P19237 187 aa0.16□□□□□ -2.38
SSB-208ENST00000468600 GLRA2P23416 452 aa0.16□□□□□ -2.38
SSB-208ENST00000468600 MAGEA3P43357 314 aa0.16□□□□□ -2.38
SSB-208ENST00000468600 TUFMP49411 452 aaKnown RBP0.16□□□□□ -2.38
SSB-208ENST00000468600 NUDT2P50583 147 aa0.16□□□□□ -2.38
SSB-208ENST00000468600 RAB9AP51151 201 aa0.16□□□□□ -2.38
SSB-208ENST00000468600 DOC2AQ14183 400 aa0.16□□□□□ -2.38
SSB-208ENST00000468600 KDM4DQ6B0I6 523 aa0.16□□□□□ -2.38
SSB-208ENST00000468600 TMEM107Q6UX40 140 aa0.16□□□□□ -2.38
SSB-208ENST00000468600 OR2M7Q8NG81 312 aa0.16□□□□□ -2.38
SSB-208ENST00000468600 OR5K2Q8NHB8 316 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms