RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 OR5A2Q8NGI9 324 aa16.83■□□□□ 0.28
NPHP4-206ENST00000468253 CNIH3Q8TBE1 160 aa16.83■□□□□ 0.28
NPHP4-206ENST00000468253 C10orf35Q96D05 121 aa16.83■□□□□ 0.28
NPHP4-206ENST00000468253 GAL3ST1Q99999 423 aa16.83■□□□□ 0.28
NPHP4-206ENST00000468253 ALG8Q9BVK2 526 aa16.83■□□□□ 0.28
NPHP4-206ENST00000468253 RTL8AQ9BWD3 113 aa16.83■□□□□ 0.28
NPHP4-206ENST00000468253 TLNRD1Q9H1K6 362 aa16.83■□□□□ 0.28
NPHP4-206ENST00000468253 ACOXLQ9NUZ1 547 aa16.83■□□□□ 0.28
NPHP4-206ENST00000468253 PIGLQ9Y2B2 252 aa16.83■□□□□ 0.28
NPHP4-206ENST00000468253 FN1P02751 2386 aaKnown RBP16.82■□□□□ 0.28
NPHP4-206ENST00000468253 PPIAL4EA0A075B759 164 aa16.82■□□□□ 0.28
NPHP4-206ENST00000468253 PPIAL4DF5H284 164 aa16.82■□□□□ 0.28
NPHP4-206ENST00000468253 J3QLW9 94 aa16.82■□□□□ 0.28
NPHP4-206ENST00000468253 P2RY10O00398 339 aa16.82■□□□□ 0.28
NPHP4-206ENST00000468253 LMX1BO60663 402 aa16.82■□□□□ 0.28
NPHP4-206ENST00000468253 LHBP01229 141 aa16.82■□□□□ 0.28
NPHP4-206ENST00000468253 ISG15P05161 165 aa16.82■□□□□ 0.28
NPHP4-206ENST00000468253 GRPP07492 148 aa16.82■□□□□ 0.28
NPHP4-206ENST00000468253 GNAO1P09471 354 aa16.82■□□□□ 0.28
NPHP4-206ENST00000468253 UBCP0CG48 685 aaKnown RBP16.82■□□□□ 0.28
NPHP4-206ENST00000468253 PPIAL4FP0DN26 164 aa16.82■□□□□ 0.28
NPHP4-206ENST00000468253 ZNF19P17023 458 aa16.82■□□□□ 0.28
NPHP4-206ENST00000468253 CSNK2BP67870 215 aa16.82■□□□□ 0.28
NPHP4-206ENST00000468253 CEACAM21Q3KPI0 293 aa16.82■□□□□ 0.28
NPHP4-206ENST00000468253 TMEM244Q5VVB8 128 aa16.82■□□□□ 0.28
NPHP4-206ENST00000468253 PRAMEF6Q5VXH4 476 aa16.82■□□□□ 0.28
NPHP4-206ENST00000468253 ZDHHC23Q8IYP9 409 aa16.82■□□□□ 0.28
NPHP4-206ENST00000468253 KLHL36Q8N4N3 616 aa16.82■□□□□ 0.28
NPHP4-206ENST00000468253 PELI1Q96FA3 418 aa16.82■□□□□ 0.28
NPHP4-206ENST00000468253 PATZ1Q9HBE1 687 aaKnown RBP16.82■□□□□ 0.28
NPHP4-206ENST00000468253 UFSP2Q9NUQ7 469 aa16.82■□□□□ 0.28
NPHP4-206ENST00000468253 PPIAL4AQ9Y536 164 aa16.82■□□□□ 0.28
NPHP4-206ENST00000468253 YLPM1P49750 1951 aaKnown RBP16.82■□□□□ 0.28
NPHP4-206ENST00000468253 DYSFO75923 2080 aa16.81■□□□□ 0.28
NPHP4-206ENST00000468253 IGHV3-64DA0A0J9YX35 117 aa16.81■□□□□ 0.28
NPHP4-206ENST00000468253 A0A1B0GVI7 797 aa16.81■□□□□ 0.28
NPHP4-206ENST00000468253 ISPDA4D126 451 aa16.81■□□□□ 0.28
NPHP4-206ENST00000468253 CYB5R3P00387 301 aaPredicted RBP16.81■□□□□ 0.28
NPHP4-206ENST00000468253 HTR1AP08908 422 aa16.81■□□□□ 0.28
NPHP4-206ENST00000468253 DVL1P1P54792 670 aaPredicted RBP16.81■□□□□ 0.28
NPHP4-206ENST00000468253 RIPPLY3P57055 190 aa16.81■□□□□ 0.28
NPHP4-206ENST00000468253 WDR38Q5JTN6 314 aa16.81■□□□□ 0.28
NPHP4-206ENST00000468253 CLVS2Q5SYC1 327 aa16.81■□□□□ 0.28
NPHP4-206ENST00000468253 RNF170Q96K19 258 aa16.81■□□□□ 0.28
NPHP4-206ENST00000468253 C4orf36Q96KX1 117 aa16.81■□□□□ 0.28
NPHP4-206ENST00000468253 NARFLQ9H6Q4 476 aa16.81■□□□□ 0.28
NPHP4-206ENST00000468253 PPP1R3EQ9H7J1 279 aa16.81■□□□□ 0.28
NPHP4-206ENST00000468253 TRIM36Q9NQ86 728 aa16.81■□□□□ 0.28
NPHP4-206ENST00000468253 C1orf123Q9NWV4 160 aa16.81■□□□□ 0.28
NPHP4-206ENST00000468253 FRRS1LQ9P0K9 344 aa16.81■□□□□ 0.28
NPHP4-206ENST00000468253 PCDHB10Q9UN67 800 aa16.81■□□□□ 0.28
NPHP4-206ENST00000468253 DIMT1Q9UNQ2 313 aaKnown RBP16.81■□□□□ 0.28
NPHP4-206ENST00000468253 CAB39Q9Y376 341 aaPredicted RBP16.81■□□□□ 0.28
NPHP4-206ENST00000468253 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.81■□□□□ 0.282e-8■■■■■ 42.2
NPHP4-206ENST00000468253 ANK3Q12955 4377 aaKnown RBP16.8■□□□□ 0.28
NPHP4-206ENST00000468253 EFCAB10A6NFE3 127 aa16.8■□□□□ 0.28
NPHP4-206ENST00000468253 FAM157AC9JC47 383 aa16.8■□□□□ 0.28
NPHP4-206ENST00000468253 SYT7O43581 403 aa16.8■□□□□ 0.28
NPHP4-206ENST00000468253 NDUFA2O43678 99 aa16.8■□□□□ 0.28
NPHP4-206ENST00000468253 NRASP01111 189 aa16.8■□□□□ 0.28
NPHP4-206ENST00000468253 LIMS3P0CW19 117 aa16.8■□□□□ 0.28
NPHP4-206ENST00000468253 LIMS4P0CW20 117 aa16.8■□□□□ 0.28
NPHP4-206ENST00000468253 PIPP12273 146 aaPredicted RBP16.8■□□□□ 0.28
NPHP4-206ENST00000468253 PCMT1P22061 227 aa16.8■□□□□ 0.28
NPHP4-206ENST00000468253 PSMB10P40306 273 aa16.8■□□□□ 0.28
NPHP4-206ENST00000468253 GNG3P63215 75 aa16.8■□□□□ 0.28
NPHP4-206ENST00000468253 ZNF154Q13106 437 aa16.8■□□□□ 0.28
NPHP4-206ENST00000468253 KCNJ8Q15842 424 aa16.8■□□□□ 0.28
NPHP4-206ENST00000468253 WDR86Q86TI4 376 aa16.8■□□□□ 0.28
NPHP4-206ENST00000468253 OR51F2Q8NH61 342 aa16.8■□□□□ 0.28
NPHP4-206ENST00000468253 GGHQ92820 318 aa16.8■□□□□ 0.28
NPHP4-206ENST00000468253 DVL3Q92997 716 aaPredicted RBP16.8■□□□□ 0.28
NPHP4-206ENST00000468253 TMEM80Q96HE8 168 aa16.8■□□□□ 0.28
NPHP4-206ENST00000468253 CNOT2Q9NZN8 540 aaKnown RBP16.8■□□□□ 0.28
NPHP4-206ENST00000468253 MIOXQ9UGB7 285 aa16.8■□□□□ 0.28
NPHP4-206ENST00000468253 KCNS2Q9ULS6 477 aa16.8■□□□□ 0.28
NPHP4-206ENST00000468253 EXOSC1Q9Y3B2 195 aaKnown RBP16.8■□□□□ 0.28
NPHP4-206ENST00000468253 TRAV20A0A0B4J274 112 aa16.79■□□□□ 0.28
NPHP4-206ENST00000468253 OR5B21A6NL26 309 aa16.79■□□□□ 0.28
NPHP4-206ENST00000468253 INAFM1C9JVW0 142 aa16.79■□□□□ 0.28
NPHP4-206ENST00000468253 LGALS8O00214 317 aa16.79■□□□□ 0.28
NPHP4-206ENST00000468253 MSMBP08118 114 aa16.79■□□□□ 0.28
NPHP4-206ENST00000468253 WNT2P09544 360 aa16.79■□□□□ 0.28
NPHP4-206ENST00000468253 FAHP16930 419 aa16.79■□□□□ 0.28
NPHP4-206ENST00000468253 KIR3DL2P43630 455 aa16.79■□□□□ 0.28
NPHP4-206ENST00000468253 TGM4P49221 684 aa16.79■□□□□ 0.28
NPHP4-206ENST00000468253 GBX2P52951 348 aaPredicted RBP16.79■□□□□ 0.28
NPHP4-206ENST00000468253 MED21Q13503 144 aa16.79■□□□□ 0.28
NPHP4-206ENST00000468253 ALKBH1Q13686 389 aaKnown RBP16.79■□□□□ 0.28
NPHP4-206ENST00000468253 ZNF404Q494X3 552 aa16.79■□□□□ 0.28
NPHP4-206ENST00000468253 LAIR2Q6ISS4 152 aa16.79■□□□□ 0.28
NPHP4-206ENST00000468253 TMPRSS11AQ6ZMR5 421 aa16.79■□□□□ 0.28
NPHP4-206ENST00000468253 OR10Z1Q8NGY1 313 aa16.79■□□□□ 0.28
NPHP4-206ENST00000468253 HPSE2Q8WWQ2 592 aa16.79■□□□□ 0.28
NPHP4-206ENST00000468253 ISG20L2Q9H9L3 353 aaKnown RBP16.79■□□□□ 0.28
NPHP4-206ENST00000468253 POLR3KQ9Y2Y1 108 aaPredicted RBP16.79■□□□□ 0.28
NPHP4-206ENST00000468253 C2CD3Q4AC94 2353 aa16.79■□□□□ 0.28
NPHP4-206ENST00000468253 PPIAL4CA0A0B4J2A2 164 aa16.78■□□□□ 0.28
NPHP4-206ENST00000468253 A6NLC8 198 aa16.78■□□□□ 0.28
NPHP4-206ENST00000468253 OR4C45A6NMZ5 311 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms