RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 TSPAN14Q8NG11 270 aa13.57□□□□□ -0.24
GPC1-207ENST00000466624 OR13C3Q8NGS6 347 aa13.57□□□□□ -0.24
GPC1-207ENST00000466624 PIGCQ92535 297 aa13.57□□□□□ -0.24
GPC1-207ENST00000466624 MEGF10Q96KG7 1140 aa13.57□□□□□ -0.24
GPC1-207ENST00000466624 OPALINQ96PE5 141 aa13.57□□□□□ -0.24
GPC1-207ENST00000466624 OR2V2Q96R30 315 aa13.57□□□□□ -0.24
GPC1-207ENST00000466624 CHST5Q9GZS9 411 aa13.57□□□□□ -0.24
GPC1-207ENST00000466624 C14orf119Q9NWQ9 140 aa13.57□□□□□ -0.24
GPC1-207ENST00000466624 DHDHQ9UQ10 334 aa13.57□□□□□ -0.24
GPC1-207ENST00000466624 NOTCH2Q04721 2471 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 DYSFO75923 2080 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 ANKRD61A6NGH8 418 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 TRIM64CA6NLI5 447 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 F5H5P2 479 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 GATBO75879 557 aaKnown RBP13.56□□□□□ -0.24
GPC1-207ENST00000466624 SERPINA3P01011 423 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 NRASP01111 189 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 CD2P06729 351 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 CSF3P09919 207 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 HSMCR30P0CW71 290 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 ZNF20P17024 532 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 CRYBB2P43320 205 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 RPS11P62280 158 aaKnown RBP eCLIP13.56□□□□□ -0.24
GPC1-207ENST00000466624 MAB21L1Q13394 359 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 CEACAM21Q3KPI0 293 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 UTS2BQ765I0 119 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 OR8S1Q8NH09 359 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 TSEN15Q8WW01 171 aaKnown RBP13.56□□□□□ -0.24
GPC1-207ENST00000466624 OR5P3Q8WZ94 311 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 RDH5Q92781 318 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 ERGIC1Q969X5 290 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 HIST1H2AAQ96QV6 131 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 MICU1Q9BPX6 476 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 RTL8AQ9BWD3 113 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 DLL4Q9NR61 685 aa13.56□□□□□ -0.24
GPC1-207ENST00000466624 PRRC2AP48634 2157 aaKnown RBP13.56□□□□□ -0.24
GPC1-207ENST00000466624 PNMA8CA0A1B0GUJ8 204 aa13.55□□□□□ -0.24
GPC1-207ENST00000466624 OR5B21A6NL26 309 aa13.55□□□□□ -0.24
GPC1-207ENST00000466624 TMEM210A6NLX4 147 aa13.55□□□□□ -0.24
GPC1-207ENST00000466624 H3BSH0 61 aa13.55□□□□□ -0.24
GPC1-207ENST00000466624 IFNL4K9M1U5 179 aa13.55□□□□□ -0.24
GPC1-207ENST00000466624 TPD52L2O43399 206 aaKnown RBP13.55□□□□□ -0.24
GPC1-207ENST00000466624 LMX1BO60663 402 aa13.55□□□□□ -0.24
GPC1-207ENST00000466624 ALX3O95076 343 aa13.55□□□□□ -0.24
GPC1-207ENST00000466624 OCM2P0CE71 109 aa13.55□□□□□ -0.24
GPC1-207ENST00000466624 DAOP14920 347 aa13.55□□□□□ -0.24
GPC1-207ENST00000466624 PSMA1P25786 263 aaKnown RBP13.55□□□□□ -0.24
GPC1-207ENST00000466624 TRAM1Q15629 374 aa13.55□□□□□ -0.24
GPC1-207ENST00000466624 Q499Y3 187 aa13.55□□□□□ -0.24
GPC1-207ENST00000466624 ARMCX4Q5H9R4 360 aa13.55□□□□□ -0.24
GPC1-207ENST00000466624 FAM76BQ5HYJ3 339 aa13.55□□□□□ -0.24
GPC1-207ENST00000466624 LIPKQ5VXJ0 399 aa13.55□□□□□ -0.24
GPC1-207ENST00000466624 SHEQ5VZ18 495 aa13.55□□□□□ -0.24
GPC1-207ENST00000466624 DNM1P46Q6ZS02 220 aa13.55□□□□□ -0.24
GPC1-207ENST00000466624 SERPINA12Q8IW75 414 aa13.55□□□□□ -0.24
GPC1-207ENST00000466624 PHC2Q8IXK0 858 aa13.55□□□□□ -0.24
GPC1-207ENST00000466624 OR5A2Q8NGI9 324 aa13.55□□□□□ -0.24
GPC1-207ENST00000466624 ITLN1Q8WWA0 313 aa13.55□□□□□ -0.24
GPC1-207ENST00000466624 HPSE2Q8WWQ2 592 aa13.55□□□□□ -0.24
GPC1-207ENST00000466624 DVL3Q92997 716 aaPredicted RBP13.55□□□□□ -0.24
GPC1-207ENST00000466624 FGGYQ96C11 551 aa13.55□□□□□ -0.24
GPC1-207ENST00000466624 ADAT3Q96EY9 351 aaPredicted RBP13.55□□□□□ -0.24
GPC1-207ENST00000466624 IGHV1-69-2A0A0G2JMI3 117 aa13.54□□□□□ -0.24
GPC1-207ENST00000466624 MAPK3P27361 379 aaPredicted RBP13.54□□□□□ -0.24
GPC1-207ENST00000466624 DSCR9P59020 149 aa13.54□□□□□ -0.24
GPC1-207ENST00000466624 CNN3Q15417 329 aaKnown RBP13.54□□□□□ -0.24
GPC1-207ENST00000466624 ZNF181Q2M3W8 571 aa13.54□□□□□ -0.24
GPC1-207ENST00000466624 SYT6Q5T7P8 510 aaPredicted RBP13.54□□□□□ -0.24
GPC1-207ENST00000466624 PLCXD3Q63HM9 321 aa13.54□□□□□ -0.24
GPC1-207ENST00000466624 KCTD8Q6ZWB6 473 aa13.54□□□□□ -0.24
GPC1-207ENST00000466624 MOB3CQ70IA8 216 aa13.54□□□□□ -0.24
GPC1-207ENST00000466624 OR5D14Q8NGL3 314 aa13.54□□□□□ -0.24
GPC1-207ENST00000466624 Q8TCH9 128 aa13.54□□□□□ -0.24
GPC1-207ENST00000466624 TMEM106AQ96A25 262 aa13.54□□□□□ -0.24
GPC1-207ENST00000466624 TLNRD1Q9H1K6 362 aa13.54□□□□□ -0.24
GPC1-207ENST00000466624 PPP1R3EQ9H7J1 279 aa13.54□□□□□ -0.24
GPC1-207ENST00000466624 VCX3AQ9NNX9 186 aa13.54□□□□□ -0.24
GPC1-207ENST00000466624 GPR173Q9NS66 373 aa13.54□□□□□ -0.24
GPC1-207ENST00000466624 CSMD1Q96PZ7 3565 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 LOC100289279A0A1B0GTE1 492 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 A6NIN4 97 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 ZNF879B4DU55 563 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 NDUFS8O00217 210 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 SSX4O60224 188 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 RP2O75695 350 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 SC5DO75845 299 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 GABRA5P31644 462 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 PDLIM4P50479 330 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 ART1P52961 327 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 GNG3P63215 75 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 UBE2V2Q15819 145 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 SPRNQ5BIV9 151 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 CEP78Q5JTW2 689 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 DNAAF1Q8NEP3 725 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 OR1M1Q8NGA1 313 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 OR13C5Q8NGS8 318 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 SPSB1Q96BD6 273 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 RNF170Q96K19 258 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 ZCCHC4Q9H5U6 513 aa13.53□□□□□ -0.24
GPC1-207ENST00000466624 CHODLQ9H9P2 273 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms