RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 GABARAPO95166 117 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 CD2P06729 351 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 ZNF20P17024 532 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 CA6P23280 308 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 MAPK3P27361 379 aaPredicted RBP9.48□□□□□ -0.89
VCP-204ENST00000466100 KRTAP10-9P60411 292 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 PRDX4Q13162 271 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 UBE2V2Q15819 145 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 MOGQ16653 247 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 NKPD1Q17RQ9 610 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 CLVS2Q5SYC1 327 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 AGAP6Q5VW22 663 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 CRIP3Q6Q6R5 217 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 CEACAM19Q7Z692 300 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 ANKRD13BQ86YJ7 626 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 ZDHHC23Q8IYP9 409 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 FTMTQ8N4E7 242 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 OR13G1Q8NGZ3 307 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 PHYHIPQ92561 330 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 DVL3Q92997 716 aaPredicted RBP9.48□□□□□ -0.89
VCP-204ENST00000466100 ADAT1Q9BUB4 502 aaKnown RBP9.48□□□□□ -0.89
VCP-204ENST00000466100 PAPOLGQ9BWT3 736 aaKnown RBP9.48□□□□□ -0.89
VCP-204ENST00000466100 NAA50Q9GZZ1 169 aaKnown RBP9.48□□□□□ -0.89
VCP-204ENST00000466100 ZCCHC4Q9H5U6 513 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 GPR173Q9NS66 373 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 CYSLTR2Q9NS75 346 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 FAIMQ9NVQ4 179 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 TXNL4BQ9NX01 149 aaKnown RBP9.48□□□□□ -0.89
VCP-204ENST00000466100 TAS2R4Q9NYW5 299 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 MPC1Q9Y5U8 109 aa9.48□□□□□ -0.89
VCP-204ENST00000466100 DYSFO75923 2080 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 A0A1W2PPK0 400 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 C17orf100A8MU93 164 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 PTBP3O95758 552 aaKnown RBP9.47□□□□□ -0.89
VCP-204ENST00000466100 NRASP01111 189 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 IGHV1-46P01743 117 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 NAT2P11245 290 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 ADRA2CP18825 462 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 PPOXP50336 477 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 ZNF81P51508 661 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 SNRPD2P62316 118 aaKnown RBP9.47□□□□□ -0.89
VCP-204ENST00000466100 CTF1Q16619 201 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 CEACAM21Q3KPI0 293 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 TIMM50Q3ZCQ8 353 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 HSD17B12Q53GQ0 312 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 C22orf42Q6IC83 251 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 PAMR1Q6UXH9 720 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 GDPGP1Q6ZNW5 385 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 WDR86Q86TI4 376 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 LRRTM1Q86UE6 522 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 SERPINA12Q8IW75 414 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 OR10AD1Q8NGE0 317 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 OR51A2Q8NGJ7 313 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 OR13C9Q8NGT0 318 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 OR5P3Q8WZ94 311 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 PIGCQ92535 297 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 TECTBQ96PL2 329 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 CHCHD6Q9BRQ6 235 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 CENPOQ9BU64 300 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 SLC22A4Q9H015 551 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 RNF167Q9H6Y7 350 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 ABCB9Q9NP78 766 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 TMEM100Q9NV29 134 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 FOXJ3Q9UPW0 622 aa9.47□□□□□ -0.89
VCP-204ENST00000466100 LOC100506127A0A0U1RQW1 187 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 PLSCR5A0PG75 271 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 PQLC2LA1A4F0 135 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 H7C417 338 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 OVOL3O00110 214 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 SULT1B1O43704 296 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 AIREO43918 545 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 ARL6IP5O75915 188 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 CD55P08174 381 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 CD37P11049 281 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 ATF1P18846 271 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 CALRP27797 417 aaKnown RBP9.46□□□□□ -0.9
VCP-204ENST00000466100 THBS2P35442 1172 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 TGFBR1P36897 503 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 GNALP38405 381 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 CD200P41217 278 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 MAB21L1Q13394 359 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 OR8G1Q15617 311 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 SPRNQ5BIV9 151 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 DMRTC1Q5HYR2 192 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 CEP78Q5JTW2 689 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 GPR107Q5VW38 600 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 PLCXD3Q63HM9 321 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 RNF144BQ7Z419 303 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 LYPD6Q86Y78 171 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 ZCCHC24Q8N2G6 241 aaKnown RBP9.46□□□□□ -0.9
VCP-204ENST00000466100 DNAAF1Q8NEP3 725 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 OR1M1Q8NGA1 313 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 OR5D14Q8NGL3 314 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 ELMOD3Q96FG2 381 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 GFI1Q99684 422 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 LIME1Q9H400 295 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 EXOSC4Q9NPD3 245 aaKnown RBP9.46□□□□□ -0.9
VCP-204ENST00000466100 NKIRAS2Q9NYR9 191 aa9.46□□□□□ -0.9
VCP-204ENST00000466100 FBXO9Q9UK97 447 aaPredicted RBP9.46□□□□□ -0.9
VCP-204ENST00000466100 ZDHHC8Q9ULC8 765 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms