RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 CRIP3Q6Q6R5 217 aa11.89□□□□□ -0.51
MCF2L-220ENST00000464800 LYPD4Q6UWN0 246 aa11.89□□□□□ -0.51
MCF2L-220ENST00000464800 ZNF788Q6ZQV5 615 aa11.89□□□□□ -0.51
MCF2L-220ENST00000464800 LIAT1Q6ZQX7 453 aa11.89□□□□□ -0.51
MCF2L-220ENST00000464800 CYB561A3Q8NBI2 242 aa11.89□□□□□ -0.51
MCF2L-220ENST00000464800 OR4F17Q8NGA8 305 aa11.89□□□□□ -0.51
MCF2L-220ENST00000464800 OR5D13Q8NGL4 314 aa11.89□□□□□ -0.51
MCF2L-220ENST00000464800 DUS3LQ96G46 650 aaKnown RBP11.89□□□□□ -0.51
MCF2L-220ENST00000464800 GAFA1Q96PS6 74 aa11.89□□□□□ -0.51
MCF2L-220ENST00000464800 RAB3IPQ96QF0 476 aaPredicted RBP11.89□□□□□ -0.51
MCF2L-220ENST00000464800 OR4F4Q96R69 305 aa11.89□□□□□ -0.51
MCF2L-220ENST00000464800 MICU1Q9BPX6 476 aa11.89□□□□□ -0.51
MCF2L-220ENST00000464800 WDR13Q9H1Z4 485 aa11.89□□□□□ -0.51
MCF2L-220ENST00000464800 MMP28Q9H239 520 aa11.89□□□□□ -0.51
MCF2L-220ENST00000464800 hCG_38984A0A1B0GV85 526 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 ANXA2P2A6NMY6 339 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 CHST1O43916 411 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 CFL1P23528 166 aaKnown RBP11.88□□□□□ -0.51
MCF2L-220ENST00000464800 IFNGR2P38484 337 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 SLC15A1P46059 708 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 GSSP48637 474 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 ENTPD1P49961 510 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 GRB2P62993 217 aaKnown RBP11.88□□□□□ -0.51
MCF2L-220ENST00000464800 IL5RAQ01344 420 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 DGUOKQ16854 277 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 HCP5Q6MZN7 132 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 CPLX4Q7Z7G2 160 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 NDUFA11Q86Y39 141 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 FTMTQ8N4E7 242 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 CSNK2A3Q8NEV1 391 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 OR52L1Q8NGH7 329 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 OR51L1Q8NGJ5 315 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 OR10Z1Q8NGY1 313 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 ANGPTL6Q8NI99 470 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 ZNRF4Q8WWF5 429 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 R3HDM4Q96D70 268 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 RTL8AQ9BWD3 113 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 MYLK2Q9H1R3 596 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 MEGF9Q9H1U4 602 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 PPP1R3EQ9H7J1 279 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 SP140LQ9H930 580 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 ZNF446Q9NWS9 450 aa11.88□□□□□ -0.51
MCF2L-220ENST00000464800 SIGLEC5O15389 551 aa11.87□□□□□ -0.51
MCF2L-220ENST00000464800 TFF1P04155 84 aa11.87□□□□□ -0.51
MCF2L-220ENST00000464800 CD28P10747 220 aa11.87□□□□□ -0.51
MCF2L-220ENST00000464800 HSD11B1P28845 292 aa11.87□□□□□ -0.51
MCF2L-220ENST00000464800 RRM2P31350 389 aa11.87□□□□□ -0.51
MCF2L-220ENST00000464800 GSK3AP49840 483 aa11.87□□□□□ -0.51
MCF2L-220ENST00000464800 MXRA7P84157 204 aa11.87□□□□□ -0.51
MCF2L-220ENST00000464800 TSPAN31Q12999 210 aa11.87□□□□□ -0.51
MCF2L-220ENST00000464800 SNCBQ16143 134 aa11.87□□□□□ -0.51
MCF2L-220ENST00000464800 GFOD2Q3B7J2 385 aa11.87□□□□□ -0.51
MCF2L-220ENST00000464800 GNPDA2Q8TDQ7 276 aa11.87□□□□□ -0.51
MCF2L-220ENST00000464800 RPL3LQ92901 407 aaKnown RBP11.87□□□□□ -0.51
MCF2L-220ENST00000464800 MCUR1Q96AQ8 359 aa11.87□□□□□ -0.51
MCF2L-220ENST00000464800 SGK3Q96BR1 496 aa11.87□□□□□ -0.51
MCF2L-220ENST00000464800 AJUBAQ96IF1 538 aa11.87□□□□□ -0.51
MCF2L-220ENST00000464800 NKX3-1Q99801 234 aaPredicted RBP11.87□□□□□ -0.51
MCF2L-220ENST00000464800 ELL3Q9HB65 397 aaPredicted RBP11.87□□□□□ -0.51
MCF2L-220ENST00000464800 CD300AQ9UGN4 299 aa11.87□□□□□ -0.51
MCF2L-220ENST00000464800 RHBDD3Q9Y3P4 386 aa11.87□□□□□ -0.51
MCF2L-220ENST00000464800 TRBV23-1A0A0A0MS06 115 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 TMEM210A6NLX4 147 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 ZNF593O00488 134 aaPredicted RBP11.86□□□□□ -0.51
MCF2L-220ENST00000464800 AKR7A2O43488 359 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 FABP3P05413 133 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 ACAA1P09110 424 aaPredicted RBP11.86□□□□□ -0.51
MCF2L-220ENST00000464800 PAICSP22234 425 aaKnown RBP11.86□□□□□ -0.51
MCF2L-220ENST00000464800 PAX6P26367 422 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 PRDX6P30041 224 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 FMO3P31513 532 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 BMXP51813 675 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 KLHL12Q53G59 568 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 ZBTB37Q5TC79 503 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 FOXB2Q5VYV0 432 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 RPL13AP3Q6NVV1 102 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 KCTD8Q6ZWB6 473 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 FAM57BQ71RH2 274 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 FAM185AQ8N0U4 392 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 OR52H1Q8NGJ2 320 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 DDOQ99489 341 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 ELAC2Q9BQ52 826 aaKnown RBP11.86□□□□□ -0.51
MCF2L-220ENST00000464800 EGLN3Q9H6Z9 239 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 ZNF702PQ9H963 129 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 ABCB9Q9NP78 766 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 SERTAD4Q9NUC0 356 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 NLKQ9UBE8 527 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 MAGEL2Q9UJ55 1249 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 MPC1Q9Y5U8 109 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 CDH10Q9Y6N8 788 aa11.86□□□□□ -0.51
MCF2L-220ENST00000464800 DHRS12A0PJE2 317 aa11.85□□□□□ -0.51
MCF2L-220ENST00000464800 OR2AT4A6NND4 320 aa11.85□□□□□ -0.51
MCF2L-220ENST00000464800 MPIG6BO95866 241 aa11.85□□□□□ -0.51
MCF2L-220ENST00000464800 APOC1P02654 83 aa11.85□□□□□ -0.51
MCF2L-220ENST00000464800 MSX2P35548 267 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-220ENST00000464800 GABRA2P47869 451 aa11.85□□□□□ -0.51
MCF2L-220ENST00000464800 ZNF121P58317 390 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-220ENST00000464800 PRDX4Q13162 271 aa11.85□□□□□ -0.51
MCF2L-220ENST00000464800 EIF2B1Q14232 305 aaKnown RBP11.85□□□□□ -0.51
MCF2L-220ENST00000464800 HABP2Q14520 560 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms