RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 OSGIN2Q9Y236 505 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 CEP290O15078 2479 aa11.12□□□□□ -0.63
CLCNKA-204ENST00000464764 COL4A2P08572 1712 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 KIR2DS5A0A0G2JLQ3 304 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 A0A0G2JNG1 304 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 FTCDNL1E5RQL4 147 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 KIR2DS3K7RE56 304 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 CST4P01036 141 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 OR13C7P0DN81 318 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 ZNF17P17021 662 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 TBPP20226 339 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 LAP3P28838 519 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 TNFRSF4P43489 277 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 ASCL1P50553 236 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 KIR2DS5Q14953 304 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 SP6Q3SY56 376 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 HLA-DQA1Q5Y7H0 255 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 ARRDC1Q8N5I2 433 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 CD300LFQ8TDQ1 290 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 KCNK17Q96T54 332 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 GPR84Q9NQS5 396 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 PARP11Q9NR21 331 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 SRPK3Q9UPE1 567 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 FBXO7Q9Y3I1 522 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 IGHV3-20A0A0C4DH32 117 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 FAM221BA6H8Z2 402 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 E9PLN8 166 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 TSPAN2O60636 221 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 YIF1AO95070 293 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 IGHV2-70P01814 119 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 AKT2P31751 481 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 CEBPGP53567 150 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 BIDP55957 195 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 PEG10Q86TG7 708 aaKnown RBP11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 LHFPL1Q86WI0 220 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 OR10H5Q8NGA6 315 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 OR9K2Q8NGE7 335 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 MRPL24Q96A35 216 aaKnown RBP11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 OR5B2Q96R09 309 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 WDR77Q9BQA1 342 aaPredicted RBP11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 HDHD3Q9BSH5 251 aaPredicted RBP11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 SCRT1Q9BWW7 348 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 DNAJB11Q9UBS4 358 aa11.11□□□□□ -0.63
CLCNKA-204ENST00000464764 XRCC2O43543 280 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 IGHV2-5P01817 119 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 CHRM2P08172 466 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 THBS4P35443 961 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 GUK1Q16774 197 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 CARD17Q5XLA6 110 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 EIF5AL1Q6IS14 154 aaKnown RBP11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 Q7L0L9 218 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 OR51T1Q8NGJ9 327 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 LIN37Q96GY3 246 aaPredicted RBP11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 C5orf34Q96MH7 638 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 SH3BGRL3Q9H299 93 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 WFDC1Q9HC57 220 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 METTL1Q9UBP6 276 aaKnown RBP11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 IGKV1-9A0A0C4DH69 117 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 MASP2O00187 686 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 LINC01565O15544 149 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 NME1P15531 152 aaKnown RBP11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 ITGA3P26006 1051 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 SNCAP37840 140 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 HSF1Q00613 529 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 ZNF600Q6ZNG1 722 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 GRINAQ7Z429 371 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 ZNF701Q9NV72 531 aaPredicted RBP11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 RCL1Q9Y2P8 373 aaKnown RBP11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 KPTNQ9Y664 436 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 CEACAM18A8MTB9 384 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 TMEM150CB9EJG8 249 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 RER1O15258 196 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 DIRAS3O95661 229 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 TLE3Q04726 772 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 FZD2Q14332 565 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 NSDHLQ15738 373 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 ZNF529Q6P280 563 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 DTX1Q86Y01 620 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 OR8B12Q8NGG6 310 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 ADAMTS18Q8TE60 1221 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 DAZLQ92904 295 aaKnown RBP11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 REEP6Q96HR9 211 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 ZNF285Q96NJ3 590 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 POLR1DQ9Y2S0 133 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 STARD10Q9Y365 291 aa11.1□□□□□ -0.63
CLCNKA-204ENST00000464764 UMAD1C9J7I0 102 aa11.09□□□□□ -0.63
CLCNKA-204ENST00000464764 IGHMP01871 453 aa11.09□□□□□ -0.63
CLCNKA-204ENST00000464764 GSTP1P09211 210 aaKnown RBP11.09□□□□□ -0.63
CLCNKA-204ENST00000464764 BLVRBP30043 206 aaPredicted RBP11.09□□□□□ -0.63
CLCNKA-204ENST00000464764 GLP1RP43220 463 aa11.09□□□□□ -0.63
CLCNKA-204ENST00000464764 GABRA4P48169 554 aa11.09□□□□□ -0.63
CLCNKA-204ENST00000464764 SULT1A1P50225 295 aa11.09□□□□□ -0.63
CLCNKA-204ENST00000464764 ZNF239Q16600 458 aaKnown RBP11.09□□□□□ -0.63
CLCNKA-204ENST00000464764 RNF212Q495C1 297 aa11.09□□□□□ -0.63
CLCNKA-204ENST00000464764 KCNG3Q8TAE7 436 aa11.09□□□□□ -0.63
CLCNKA-204ENST00000464764 TCTN2Q96GX1 697 aa11.09□□□□□ -0.63
CLCNKA-204ENST00000464764 JSRP1Q96MG2 331 aaPredicted RBP11.09□□□□□ -0.63
CLCNKA-204ENST00000464764 PRRX2Q99811 253 aa11.09□□□□□ -0.63
CLCNKA-204ENST00000464764 OCSTAMPQ9BR26 566 aa11.09□□□□□ -0.63
CLCNKA-204ENST00000464764 B3GALT5Q9Y2C3 310 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms