RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 LRRC29Q8WV35 223 aa10.8□□□□□ -0.68
XRN1-203ENST00000463916 RPL3LQ92901 407 aaKnown RBP10.8□□□□□ -0.68
XRN1-203ENST00000463916 OR8B2Q96RD0 313 aa10.8□□□□□ -0.68
XRN1-203ENST00000463916 MNTQ99583 582 aa10.8□□□□□ -0.68
XRN1-203ENST00000463916 SMURF1Q9HCE7 757 aa10.8□□□□□ -0.68
XRN1-203ENST00000463916 CLN8Q9UBY8 286 aa10.8□□□□□ -0.68
XRN1-203ENST00000463916 OR5V1Q9UGF6 321 aa10.8□□□□□ -0.68
XRN1-203ENST00000463916 A0A1B0GW55 424 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 ANXA2P2A6NMY6 339 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 ENTPD6O75354 484 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 DUX4L2P0CJ85 424 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 DUX4L3P0CJ86 424 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 DUX4L4P0CJ87 422 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 DUX4L5P0CJ88 424 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 DUX4L6P0CJ89 424 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 DUX4L7P0CJ90 424 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 CPT2P23786 658 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 MAP2K3P46734 347 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 CDC42P60953 191 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 IL5RAQ01344 420 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 EGR3Q06889 387 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 ZNF829Q3KNS6 432 aaPredicted RBP10.79□□□□□ -0.68
XRN1-203ENST00000463916 CEP78Q5JTW2 689 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 DUX4L9Q6RFH8 374 aaPredicted RBP10.79□□□□□ -0.68
XRN1-203ENST00000463916 NLRC3Q7RTR2 1065 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 COMMD2Q86X83 199 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 RAB40AQ8WXH6 277 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 RNF170Q96K19 258 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 MICU1Q9BPX6 476 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 RNPEPL1Q9HAU8 725 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 DUX4Q9UBX2 424 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 OR52A1Q9UKL2 312 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 GTF2A1LQ9UNN4 478 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 SLC22A13Q9Y226 551 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 AUP1Q9Y679 476 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 R4GMQ9 66 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 TENM1Q9UKZ4 2725 aa10.79□□□□□ -0.68
XRN1-203ENST00000463916 TRAV38-1A0A0B4J264 116 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 IGHV2-70DA0A0C4DH43 119 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 ZNF816-ZNF321PA0A0X1KG74 233 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 A0A1B0GTI1 187 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 C22orf46C9J442 243 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 LOC110117498-PIK3R3F6TDL0 507 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 PHYHO14832 338 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 RPP14O95059 124 aaKnown RBP10.78□□□□□ -0.68
XRN1-203ENST00000463916 OR2T7P0C7T2 308 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 FAHP16930 419 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 GPM6AP51674 278 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 TEX36Q5VZQ5 186 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 ZDHHC23Q8IYP9 409 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 ELMOD2Q8IZ81 293 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 PQLC1Q8N2U9 271 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 FGFRL1Q8N441 504 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 SCCPDHQ8NBX0 429 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 SEMA6DQ8NFY4 1073 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 OR10H4Q8NGA5 316 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 OR2T27Q8NH04 317 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 TRUB1Q8WWH5 349 aaKnown RBP10.78□□□□□ -0.68
XRN1-203ENST00000463916 C19orf24Q9BVV8 132 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 RTL8AQ9BWD3 113 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 WDR13Q9H1Z4 485 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 IMPAD1Q9NX62 359 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 ORC6Q9Y5N6 252 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 KIR2DS1A0A191URI9 304 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 A6NIN4 97 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 ADAM20O43506 726 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 AMY2BP19961 511 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 CFHR2P36980 270 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 GMFBP60983 142 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 ZNF85Q03923 595 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 SNCBQ16143 134 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 LIPNQ5VXI9 398 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 RORBQ92753 470 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 RNF166Q96A37 237 aaPredicted RBP10.78□□□□□ -0.68
XRN1-203ENST00000463916 RAB3IPQ96QF0 476 aaPredicted RBP10.78□□□□□ -0.68
XRN1-203ENST00000463916 SLC6A7Q99884 636 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 PIGLQ9Y2B2 252 aa10.78□□□□□ -0.68
XRN1-203ENST00000463916 J3QRE1 110 aa10.77□□□□□ -0.69
XRN1-203ENST00000463916 P2RY10O00398 339 aa10.77□□□□□ -0.69
XRN1-203ENST00000463916 RHBDL1O75783 438 aa10.77□□□□□ -0.69
XRN1-203ENST00000463916 TFF1P04155 84 aa10.77□□□□□ -0.69
XRN1-203ENST00000463916 ATP6V1E1P36543 226 aa10.77□□□□□ -0.69
XRN1-203ENST00000463916 MTNR1AP48039 350 aa10.77□□□□□ -0.69
XRN1-203ENST00000463916 SNRPGP62308 76 aaKnown RBP10.77□□□□□ -0.69
XRN1-203ENST00000463916 RIPPLY1Q0D2K3 151 aa10.77□□□□□ -0.69
XRN1-203ENST00000463916 CEACAM21Q3KPI0 293 aa10.77□□□□□ -0.69
XRN1-203ENST00000463916 SLC25A30Q5SVS4 291 aa10.77□□□□□ -0.69
XRN1-203ENST00000463916 BCL2L15Q5TBC7 163 aa10.77□□□□□ -0.69
XRN1-203ENST00000463916 KCTD8Q6ZWB6 473 aa10.77□□□□□ -0.69
XRN1-203ENST00000463916 C10orf67Q8IYJ2 551 aa10.77□□□□□ -0.69
XRN1-203ENST00000463916 TEX29Q8N6K0 151 aa10.77□□□□□ -0.69
XRN1-203ENST00000463916 YIPF7Q8N8F6 280 aa10.77□□□□□ -0.69
XRN1-203ENST00000463916 OR5T2Q8NGG2 359 aa10.77□□□□□ -0.69
XRN1-203ENST00000463916 RFKQ969G6 155 aa10.77□□□□□ -0.69
XRN1-203ENST00000463916 TECTBQ96PL2 329 aa10.77□□□□□ -0.69
XRN1-203ENST00000463916 C9orf16Q9BUW7 83 aa10.77□□□□□ -0.69
XRN1-203ENST00000463916 SNX5Q9Y5X3 404 aa10.77□□□□□ -0.69
XRN1-203ENST00000463916 SOX21Q9Y651 276 aaPredicted RBP10.77□□□□□ -0.69
XRN1-203ENST00000463916 SRRM5B3KS81 715 aa10.77□□□□□ -0.69
XRN1-203ENST00000463916 H3BSH0 61 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms