RNA–Protein interactions for RNA: ENST00000463053.1

CHKB-202, Transcript of choline kinase beta, humanhuman

TSL 3

Gene CHKB, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-202ENST00000463053 ZNF556Q9HAH1 456 aa13.8□□□□□ -0.2
CHKB-202ENST00000463053 RPUSD1Q9UJJ7 312 aaKnown RBP13.8□□□□□ -0.2
CHKB-202ENST00000463053 LRP12Q9Y561 859 aa13.8□□□□□ -0.2
CHKB-202ENST00000463053 FAM181BA6NEQ2 426 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 PSMD9O00233 223 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 TIPRLO75663 272 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 CST4P01036 141 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 MELTFP08582 738 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 MUC1P15941 1255 aaPredicted RBP13.79□□□□□ -0.2
CHKB-202ENST00000463053 GNALP38405 381 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 TGM4P49221 684 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 DAPP51397 102 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 PSMA6P60900 246 aaKnown RBP13.79□□□□□ -0.2
CHKB-202ENST00000463053 IL13RA1P78552 427 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 RELBQ01201 579 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 APOFQ13790 326 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 MICBQ29980 383 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 FAM76BQ5HYJ3 339 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 SLC35D3Q5M8T2 416 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 STUMQ69YW2 141 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 PDZD9Q8IXQ8 264 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 LY6G5BQ8NDX9 201 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 UTP4Q969X6 686 aaKnown RBP13.79□□□□□ -0.2
CHKB-202ENST00000463053 PPP1R14AQ96A00 147 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 TEAD3Q99594 435 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 MICU1Q9BPX6 476 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 CHIAQ9BZP6 476 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 CNTD2Q9H8S5 307 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 NOX4Q9NPH5 578 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 SNTG1Q9NSN8 517 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 TVP23BQ9NYZ1 205 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.79□□□□□ -0.2
CHKB-202ENST00000463053 MPC1Q9Y5U8 109 aa13.79□□□□□ -0.2
CHKB-202ENST00000463053 MEGF8Q7Z7M0 2845 aa13.78□□□□□ -0.2
CHKB-202ENST00000463053 IGHV1-69DA0A0B4J2H0 117 aa13.78□□□□□ -0.2
CHKB-202ENST00000463053 ECDO95905 644 aaPredicted RBP13.78□□□□□ -0.2
CHKB-202ENST00000463053 IGHV1-69P01742 117 aa13.78□□□□□ -0.2
CHKB-202ENST00000463053 MRPL3P09001 348 aaKnown RBP13.78□□□□□ -0.2
CHKB-202ENST00000463053 DCTDP32321 178 aa13.78□□□□□ -0.2
CHKB-202ENST00000463053 CRISP1P54107 249 aa13.78□□□□□ -0.2
CHKB-202ENST00000463053 DLX1P56177 255 aa13.78□□□□□ -0.2
CHKB-202ENST00000463053 RPS7P62081 194 aaKnown RBP13.78□□□□□ -0.2
CHKB-202ENST00000463053 IL5RAQ01344 420 aa13.78□□□□□ -0.2
CHKB-202ENST00000463053 PRB3Q04118 309 aaPredicted RBP13.78□□□□□ -0.2
CHKB-202ENST00000463053 SNAPC1Q16533 368 aa13.78□□□□□ -0.2
CHKB-202ENST00000463053 DNAL1Q4LDG9 190 aa13.78□□□□□ -0.2
CHKB-202ENST00000463053 DMRTC1Q5HYR2 192 aa13.78□□□□□ -0.2
CHKB-202ENST00000463053 ATPAF1Q5TC12 328 aaPredicted RBP13.78□□□□□ -0.2
CHKB-202ENST00000463053 METTL11BQ5VVY1 283 aa13.78□□□□□ -0.2
CHKB-202ENST00000463053 FAHD1Q6P587 224 aa13.78□□□□□ -0.2
CHKB-202ENST00000463053 FIP1L1Q6UN15 594 aaKnown RBP13.78□□□□□ -0.2
CHKB-202ENST00000463053 KRT74Q7RTS7 529 aa13.78□□□□□ -0.2
CHKB-202ENST00000463053 BCDIN3DQ7Z5W3 292 aaKnown RBP13.78□□□□□ -0.2
CHKB-202ENST00000463053 KRT77Q7Z794 578 aa13.78□□□□□ -0.2
CHKB-202ENST00000463053 SCCPDHQ8NBX0 429 aa13.78□□□□□ -0.2
CHKB-202ENST00000463053 RNF170Q96K19 258 aa13.78□□□□□ -0.2
CHKB-202ENST00000463053 PKP2Q99959 881 aa13.78□□□□□ -0.2
CHKB-202ENST00000463053 RTL8AQ9BWD3 113 aa13.78□□□□□ -0.2
CHKB-202ENST00000463053 FAM206AQ9NX38 181 aa13.78□□□□□ -0.2
CHKB-202ENST00000463053 HAO2Q9NYQ3 351 aa13.78□□□□□ -0.2
CHKB-202ENST00000463053 COPS3Q9UNS2 423 aa13.78□□□□□ -0.2
CHKB-202ENST00000463053 ANXA2P2A6NMY6 339 aa13.77□□□□□ -0.21
CHKB-202ENST00000463053 POM121CA8CG34 1229 aa13.77□□□□□ -0.21
CHKB-202ENST00000463053 AKR7A2O43488 359 aa13.77□□□□□ -0.21
CHKB-202ENST00000463053 PRKYO43930 277 aa13.77□□□□□ -0.21
CHKB-202ENST00000463053 MITFO75030 526 aaPredicted RBP13.77□□□□□ -0.21
CHKB-202ENST00000463053 SRSF4Q08170 494 aaKnown RBP13.77□□□□□ -0.21
CHKB-202ENST00000463053 IKZF1Q13422 519 aa13.77□□□□□ -0.21
CHKB-202ENST00000463053 PDCD1Q15116 288 aa13.77□□□□□ -0.21
CHKB-202ENST00000463053 C11orf91Q3C1V1 193 aa13.77□□□□□ -0.21
CHKB-202ENST00000463053 PRR31Q5SQ13 230 aa13.77□□□□□ -0.21
CHKB-202ENST00000463053 PIP4P2Q8N4L2 257 aa13.77□□□□□ -0.21
CHKB-202ENST00000463053 OR10Z1Q8NGY1 313 aa13.77□□□□□ -0.21
CHKB-202ENST00000463053 GATAD2BQ8WXI9 593 aa13.77□□□□□ -0.21
CHKB-202ENST00000463053 RAB3IPQ96QF0 476 aaPredicted RBP13.77□□□□□ -0.21
CHKB-202ENST00000463053 YIPF3Q9GZM5 350 aa13.77□□□□□ -0.21
CHKB-202ENST00000463053 ZNF696Q9H7X3 374 aa13.77□□□□□ -0.21
CHKB-202ENST00000463053 ACOXLQ9NUZ1 547 aa13.77□□□□□ -0.21
CHKB-202ENST00000463053 LAMP5Q9UJQ1 280 aa13.77□□□□□ -0.21
CHKB-202ENST00000463053 A0A0U1RQK1 487 aa13.76□□□□□ -0.21
CHKB-202ENST00000463053 TMEM210A6NLX4 147 aa13.76□□□□□ -0.21
CHKB-202ENST00000463053 M0R129 80 aa13.76□□□□□ -0.21
CHKB-202ENST00000463053 GSC2O15499 205 aa13.76□□□□□ -0.21
CHKB-202ENST00000463053 WIPF1O43516 503 aa13.76□□□□□ -0.21
CHKB-202ENST00000463053 RHBDL1O75783 438 aa13.76□□□□□ -0.21
CHKB-202ENST00000463053 DNAJC8O75937 253 aaPredicted RBP13.76□□□□□ -0.21
CHKB-202ENST00000463053 HOXB6P17509 224 aaKnown RBP13.76□□□□□ -0.21
CHKB-202ENST00000463053 EPHA2P29317 976 aa13.76□□□□□ -0.21
CHKB-202ENST00000463053 PTGES3Q15185 160 aaKnown RBP13.76□□□□□ -0.21
CHKB-202ENST00000463053 DGUOKQ16854 277 aa13.76□□□□□ -0.21
CHKB-202ENST00000463053 CDONQ4KMG0 1287 aa13.76□□□□□ -0.21
CHKB-202ENST00000463053 SLC36A1Q7Z2H8 476 aa13.76□□□□□ -0.21
CHKB-202ENST00000463053 VMO1Q7Z5L0 202 aa13.76□□□□□ -0.21
CHKB-202ENST00000463053 KIR3DL3Q8N743 410 aa13.76□□□□□ -0.21
CHKB-202ENST00000463053 Q8N7P7 452 aa13.76□□□□□ -0.21
CHKB-202ENST00000463053 C12orf43Q96C57 262 aaKnown RBP13.76□□□□□ -0.21
CHKB-202ENST00000463053 NRBF2Q96F24 287 aa13.76□□□□□ -0.21
CHKB-202ENST00000463053 FAM71F1Q96KD3 344 aaPredicted RBP13.76□□□□□ -0.21
CHKB-202ENST00000463053 GAFA1Q96PS6 74 aa13.76□□□□□ -0.21
CHKB-202ENST00000463053 DCTN5Q9BTE1 182 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms