RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 GABRA2P47869 451 aa12.2□□□□□ -0.46
APP-211ENST00000462267 THBS3P49746 956 aa12.2□□□□□ -0.46
APP-211ENST00000462267 IDH3AP50213 366 aa12.2□□□□□ -0.46
APP-211ENST00000462267 RPS6KA3P51812 740 aa12.2□□□□□ -0.46
APP-211ENST00000462267 SLC25A1P53007 311 aa12.2□□□□□ -0.46
APP-211ENST00000462267 ERVFRD-1P60508 538 aa12.2□□□□□ -0.46
APP-211ENST00000462267 SSX2Q16385 188 aa12.2□□□□□ -0.46
APP-211ENST00000462267 CYBRD1Q53TN4 286 aa12.2□□□□□ -0.46
APP-211ENST00000462267 TBPL2Q6SJ96 375 aa12.2□□□□□ -0.46
APP-211ENST00000462267 DPY19L2P2Q6ZN68 376 aa12.2□□□□□ -0.46
APP-211ENST00000462267 ZNRF1Q8ND25 227 aa12.2□□□□□ -0.46
APP-211ENST00000462267 TMEM185AQ8NFB2 350 aa12.2□□□□□ -0.46
APP-211ENST00000462267 OR52H1Q8NGJ2 320 aa12.2□□□□□ -0.46
APP-211ENST00000462267 C19orf12Q9NSK7 152 aa12.2□□□□□ -0.46
APP-211ENST00000462267 NLKQ9UBE8 527 aa12.2□□□□□ -0.46
APP-211ENST00000462267 KCNG2Q9UJ96 466 aa12.2□□□□□ -0.46
APP-211ENST00000462267 SIGLEC7Q9Y286 467 aa12.2□□□□□ -0.46
APP-211ENST00000462267 TMEM5Q9Y2B1 443 aa12.2□□□□□ -0.46
APP-211ENST00000462267 TMEM120BA0PK00 339 aa12.19□□□□□ -0.46
APP-211ENST00000462267 OR2AT4A6NND4 320 aa12.19□□□□□ -0.46
APP-211ENST00000462267 YAP1P46937 504 aaKnown RBP12.19□□□□□ -0.46
APP-211ENST00000462267 SLC7A2P52569 658 aa12.19□□□□□ -0.46
APP-211ENST00000462267 VSNL1P62760 191 aa12.19□□□□□ -0.46
APP-211ENST00000462267 RRM2BQ7LG56 351 aa12.19□□□□□ -0.46
APP-211ENST00000462267 OR4C15Q8NGM1 316 aa12.19□□□□□ -0.46
APP-211ENST00000462267 TPD52L3Q96J77 140 aa12.19□□□□□ -0.46
APP-211ENST00000462267 RCHY1Q96PM5 261 aa12.19□□□□□ -0.46
APP-211ENST00000462267 MICU1Q9BPX6 476 aa12.19□□□□□ -0.46
APP-211ENST00000462267 EBF4Q9BQW3 602 aa12.19□□□□□ -0.46
APP-211ENST00000462267 ZNF649Q9BS31 505 aa12.19□□□□□ -0.46
APP-211ENST00000462267 USE1Q9NZ43 259 aa12.19□□□□□ -0.46
APP-211ENST00000462267 FFAR1O14842 300 aa12.18□□□□□ -0.46
APP-211ENST00000462267 HLA-DQA2P01906 255 aa12.18□□□□□ -0.46
APP-211ENST00000462267 TROVE2P10155 538 aaKnown RBP eCLIP12.18□□□□□ -0.46
APP-211ENST00000462267 NOS3P29474 1203 aa12.18□□□□□ -0.46
APP-211ENST00000462267 RPL31P62899 125 aaKnown RBP12.18□□□□□ -0.46
APP-211ENST00000462267 FAM3AP98173 230 aa12.18□□□□□ -0.46
APP-211ENST00000462267 TMEM200BQ69YZ2 307 aa12.18□□□□□ -0.46
APP-211ENST00000462267 ERICH5Q6P6B1 374 aa12.18□□□□□ -0.46
APP-211ENST00000462267 KCTD18Q6PI47 426 aaPredicted RBP12.18□□□□□ -0.46
APP-211ENST00000462267 SLC16A9Q7RTY1 509 aa12.18□□□□□ -0.46
APP-211ENST00000462267 ZBTB46Q86UZ6 589 aa12.18□□□□□ -0.46
APP-211ENST00000462267 IGKV1D-17A0A075B6S4 117 aa12.17□□□□□ -0.46
APP-211ENST00000462267 TMEM210A6NLX4 147 aa12.17□□□□□ -0.46
APP-211ENST00000462267 ANXA2P2A6NMY6 339 aa12.17□□□□□ -0.46
APP-211ENST00000462267 ODF3BA8MYP8 253 aa12.17□□□□□ -0.46
APP-211ENST00000462267 J3KTA2 159 aa12.17□□□□□ -0.46
APP-211ENST00000462267 AKR7A2O43488 359 aa12.17□□□□□ -0.46
APP-211ENST00000462267 RENP00797 406 aa12.17□□□□□ -0.46
APP-211ENST00000462267 ARG1P05089 322 aa12.17□□□□□ -0.46
APP-211ENST00000462267 CAPZA1P52907 286 aa12.17□□□□□ -0.46
APP-211ENST00000462267 GP2P55259 537 aaKnown RBP12.17□□□□□ -0.46
APP-211ENST00000462267 OR12D2P58182 307 aa12.17□□□□□ -0.46
APP-211ENST00000462267 SELENOWP63302 87 aa12.17□□□□□ -0.46
APP-211ENST00000462267 AGBL2Q5U5Z8 902 aa12.17□□□□□ -0.46
APP-211ENST00000462267 C16orf82Q7Z2V1 217 aa12.17□□□□□ -0.46
APP-211ENST00000462267 MREGQ8N565 214 aa12.17□□□□□ -0.46
APP-211ENST00000462267 TSPEARQ8WU66 669 aa12.17□□□□□ -0.46
APP-211ENST00000462267 RPL3LQ92901 407 aaKnown RBP12.17□□□□□ -0.46
APP-211ENST00000462267 SDSLQ96GA7 329 aa12.17□□□□□ -0.46
APP-211ENST00000462267 AKR1E2Q96JD6 320 aa12.17□□□□□ -0.46
APP-211ENST00000462267 PRR25Q96S07 402 aa12.17□□□□□ -0.46
APP-211ENST00000462267 NMNAT3Q96T66 252 aa12.17□□□□□ -0.46
APP-211ENST00000462267 SH3GL1Q99961 368 aa12.17□□□□□ -0.46
APP-211ENST00000462267 RTL8AQ9BWD3 113 aa12.17□□□□□ -0.46
APP-211ENST00000462267 PAPOLGQ9BWT3 736 aaKnown RBP12.17□□□□□ -0.46
APP-211ENST00000462267 ZNF222Q9UK12 451 aa12.17□□□□□ -0.46
APP-211ENST00000462267 SNX13Q9Y5W8 968 aa12.17□□□□□ -0.46
APP-211ENST00000462267 FAM90A22PA8MWA6 464 aa12.16□□□□□ -0.46
APP-211ENST00000462267 SLC2A1P11166 492 aa12.16□□□□□ -0.46
APP-211ENST00000462267 PSG2P11465 335 aa12.16□□□□□ -0.46
APP-211ENST00000462267 ZNF823P16415 610 aa12.16□□□□□ -0.46
APP-211ENST00000462267 GLRA1P23415 457 aa12.16□□□□□ -0.46
APP-211ENST00000462267 SLC6A1P30531 599 aa12.16□□□□□ -0.46
APP-211ENST00000462267 KDELR2P33947 212 aa12.16□□□□□ -0.46
APP-211ENST00000462267 MYCNOSP40205 109 aa12.16□□□□□ -0.46
APP-211ENST00000462267 PRKXP51817 358 aa12.16□□□□□ -0.46
APP-211ENST00000462267 SNCBQ16143 134 aa12.16□□□□□ -0.46
APP-211ENST00000462267 LRRC23Q53EV4 343 aaPredicted RBP12.16□□□□□ -0.46
APP-211ENST00000462267 LDLRAD2Q5SZI1 272 aa12.16□□□□□ -0.46
APP-211ENST00000462267 NANOGP8Q6NSW7 305 aa12.16□□□□□ -0.46
APP-211ENST00000462267 C10orf99Q6UWK7 81 aa12.16□□□□□ -0.46
APP-211ENST00000462267 ZNF782Q6ZMW2 699 aaPredicted RBP12.16□□□□□ -0.46
APP-211ENST00000462267 CALHM1Q8IU99 346 aa12.16□□□□□ -0.46
APP-211ENST00000462267 OR13D1Q8NGV5 346 aa12.16□□□□□ -0.46
APP-211ENST00000462267 FAM46AQ96IP4 442 aaKnown RBP12.16□□□□□ -0.46
APP-211ENST00000462267 RSRC1Q96IZ7 334 aaKnown RBP12.16□□□□□ -0.46
APP-211ENST00000462267 KCNJ15Q99712 375 aa12.16□□□□□ -0.46
APP-211ENST00000462267 COPS4Q9BT78 406 aa12.16□□□□□ -0.46
APP-211ENST00000462267 NSRP1Q9H0G5 558 aaKnown RBP12.16□□□□□ -0.46
APP-211ENST00000462267 ANKRD19PQ9H560 264 aa12.16□□□□□ -0.46
APP-211ENST00000462267 PPP1R3EQ9H7J1 279 aa12.16□□□□□ -0.46
APP-211ENST00000462267 RPRD1BQ9NQG5 326 aaKnown RBP12.16□□□□□ -0.46
APP-211ENST00000462267 MRPL22Q9NWU5 206 aaKnown RBP12.16□□□□□ -0.46
APP-211ENST00000462267 N6AMT1Q9Y5N5 214 aa12.16□□□□□ -0.46
APP-211ENST00000462267 LPLP06858 475 aa12.15□□□□□ -0.46
APP-211ENST00000462267 CCL3L1P16619 93 aa12.15□□□□□ -0.46
APP-211ENST00000462267 CFL1P23528 166 aaKnown RBP12.15□□□□□ -0.46
APP-211ENST00000462267 FXYD6P3P58550 94 aa12.15□□□□□ -0.46
APP-211ENST00000462267 CYLC2Q14093 348 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms