RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 FOXO1Q12778 655 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 SNTB1Q13884 538 aaKnown RBP10.95□□□□□ -0.66
COL4A6-204ENST00000461897 ZNF239Q16600 458 aaKnown RBP10.95□□□□□ -0.66
COL4A6-204ENST00000461897 CFAP77Q6ZQR2 320 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 TMPPEQ6ZT21 453 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 RHOUQ7L0Q8 258 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 VASH2Q86V25 355 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 CCDC36Q8IYA8 594 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 FGGYQ96C11 551 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 PDCD10Q9BUL8 212 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 MOB1AQ9H8S9 216 aa10.95□□□□□ -0.66
COL4A6-204ENST00000461897 ZMAT3Q9HA38 289 aaKnown RBP10.95□□□□□ -0.66
COL4A6-204ENST00000461897 AQP7P3A6NL99 342 aa10.94□□□□□ -0.66
COL4A6-204ENST00000461897 PROB1E7EW31 1015 aa10.94□□□□□ -0.66
COL4A6-204ENST00000461897 FGF16O43320 207 aa10.94□□□□□ -0.66
COL4A6-204ENST00000461897 TRAF3IP2O43734 574 aaPredicted RBP10.94□□□□□ -0.66
COL4A6-204ENST00000461897 LIPCP11150 499 aa10.94□□□□□ -0.66
COL4A6-204ENST00000461897 STARP49675 285 aa10.94□□□□□ -0.66
COL4A6-204ENST00000461897 ATP1B3P54709 279 aa10.94□□□□□ -0.66
COL4A6-204ENST00000461897 IL13RA1P78552 427 aa10.94□□□□□ -0.66
COL4A6-204ENST00000461897 NAAAQ02083 359 aa10.94□□□□□ -0.66
COL4A6-204ENST00000461897 TAF13Q15543 124 aa10.94□□□□□ -0.66
COL4A6-204ENST00000461897 ATRAIDQ6UW56 229 aa10.94□□□□□ -0.66
COL4A6-204ENST00000461897 LINC00696Q6ZRV3 163 aa10.94□□□□□ -0.66
COL4A6-204ENST00000461897 TMPRSS7Q7RTY8 843 aa10.94□□□□□ -0.66
COL4A6-204ENST00000461897 YRDCQ86U90 279 aaKnown RBP10.94□□□□□ -0.66
COL4A6-204ENST00000461897 HOGA1Q86XE5 327 aa10.94□□□□□ -0.66
COL4A6-204ENST00000461897 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.94□□□□□ -0.66
COL4A6-204ENST00000461897 LINC00346Q8IVM7 164 aa10.94□□□□□ -0.66
COL4A6-204ENST00000461897 OR5T2Q8NGG2 359 aa10.94□□□□□ -0.66
COL4A6-204ENST00000461897 OR52N4Q8NGI2 321 aa10.94□□□□□ -0.66
COL4A6-204ENST00000461897 OR10R2Q8NGX6 335 aa10.94□□□□□ -0.66
COL4A6-204ENST00000461897 PIGQQ9BRB3 760 aa10.94□□□□□ -0.66
COL4A6-204ENST00000461897 HES7Q9BYE0 225 aa10.94□□□□□ -0.66
COL4A6-204ENST00000461897 ZC4H2Q9NQZ6 224 aa10.94□□□□□ -0.66
COL4A6-204ENST00000461897 DLL3Q9NYJ7 618 aa10.94□□□□□ -0.66
COL4A6-204ENST00000461897 CEP250Q9BV73 2442 aa10.94□□□□□ -0.66
COL4A6-204ENST00000461897 A0A0B4J2A0 478 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 OR2AT4A6NND4 320 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 ATP6V1G2-DDX39BF2Z307 99 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 TEX46H3BTG2 121 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 SSX5O60225 188 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 CRHP06850 196 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 ERCC1P07992 297 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-204ENST00000461897 GSTP1P09211 210 aaKnown RBP10.93□□□□□ -0.66
COL4A6-204ENST00000461897 IL32P24001 234 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 CX3CR1P49238 355 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 PRKXP51817 358 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 BIDP55957 195 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 RAC1P63000 192 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 H3F3AP84243 136 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 NKPD1Q17RQ9 610 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 PNLIPRP3Q17RR3 467 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 FAM74A1Q5RGS3 127 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 VAX1Q5SQQ9 334 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 CD163Q86VB7 1156 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 UEVLDQ8IX04 471 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 OR5D14Q8NGL3 314 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 OR10S1Q8NGN2 331 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 THAP6Q8TBB0 222 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 C11orf40Q8WZ69 217 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 FBXW5Q969U6 566 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 SLAMF6Q96DU3 332 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 ADAT3Q96EY9 351 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-204ENST00000461897 ZNF75AQ96N20 296 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 GAL3ST1Q99999 423 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 ARPC5LQ9BPX5 153 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 EMC6Q9BV81 110 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 ZNF471Q9BX82 626 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-204ENST00000461897 MRPL13Q9BYD1 178 aaKnown RBP10.93□□□□□ -0.66
COL4A6-204ENST00000461897 NMES1Q9C002 83 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 PBOV1Q9GZY1 135 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 FN3KRPQ9HA64 309 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 TMEM100Q9NV29 134 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 TAS2R3Q9NYW6 316 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 SHPKQ9UHJ6 478 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 FAM186AA6NE01 2351 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 TEX13DA0A0J9YY54 714 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-204ENST00000461897 ARGFXA6NJG6 315 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 NUDT19A8MXV4 375 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 CCSO14618 274 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 SYT7O43581 403 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 NDUFA2O43678 99 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 TSPAN9O75954 239 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 APOC3P02656 99 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 H2AFB1P0C5Y9 115 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 RAB3AP20336 220 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 HRH1P35367 487 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 SLC35A1P78382 337 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 CYCSP99999 105 aaKnown RBP10.93□□□□□ -0.66
COL4A6-204ENST00000461897 ZNF169Q14929 603 aaPredicted RBP10.93□□□□□ -0.66
COL4A6-204ENST00000461897 OR1C1Q15619 314 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 ACTBL2Q562R1 376 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 KLHL24Q6TFL4 600 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 GVQW1Q8N7I0 195 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 CLRN3Q8NCR9 226 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 TMEM185AQ8NFB2 350 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 OR2M7Q8NG81 312 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 OR14L1PQ8NHC6 308 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 NUDCD2Q8WVJ2 157 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms