RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 FAHP16930 419 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 CA6P23280 308 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 MYL9P24844 172 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 ALDH3B1P43353 468 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 RPL5P46777 297 aaKnown RBP9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 FUT6P51993 359 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 EFNA4P52798 201 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 PRDX4Q13162 271 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 DOC2BQ14184 412 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 MST1LQ2TV78 715 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 HFEQ30201 348 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 ACSM3Q53FZ2 586 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 LHFPL2Q6ZUX7 228 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 LRP11Q86VZ4 500 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 CDH26Q8IXH8 852 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 RDH10Q8IZV5 341 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 LRRC75A-AS1Q8N1F1 130 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 NKAIN3Q8N8D7 197 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 PNLDC1Q8NA58 520 aaKnown RBP9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 MUL1Q969V5 352 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 FOXRED1Q96CU9 486 aaPredicted RBP9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 MBD6Q96DN6 1003 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 BORCS8Q96FH0 119 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 LYZL4Q96KX0 146 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 PGLYRP3Q96LB9 341 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 OPALINQ96PE5 141 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 ZCCHC4Q9H5U6 513 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 FN3KRPQ9HA64 309 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 TMEM138Q9NPI0 162 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 FOXJ3Q9UPW0 622 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 POLDIP2Q9Y2S7 368 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 RHBDD3Q9Y3P4 386 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 COL12A1Q99715 3063 aa9.4□□□□□ -0.9
SMNDC1-203ENST00000460483 HCFC1P51610 2035 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 TRBV5-5A0A0J9YX44 114 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 A0A1B0GWJ7 208 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 ZNF850A8MQ14 1090 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 OVOL3O00110 214 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 PDCD5O14737 125 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 SULT1B1O43704 296 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 LALBAP00709 142 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 NAT2P11245 290 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 PAX1P15863 534 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 CD36P16671 472 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 CD200P41217 278 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 SOX2P48431 317 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 RBP2P50120 134 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 ATP1B3P54709 279 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 KCNJ8Q15842 424 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 HSD17B12Q53GQ0 312 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 XAF1Q6GPH4 301 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 C11orf71Q6IPW1 123 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 MOB3CQ70IA8 216 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 GPR141Q7Z602 305 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 CEACAM19Q7Z692 300 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 ZFP41Q8N8Y5 198 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 ZNF671Q8TAW3 534 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 OR5P3Q8WZ94 311 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 RDH5Q92781 318 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 PPP1R14AQ96A00 147 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 TIMD4Q96H15 378 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 RNF170Q96K19 258 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 S100A13Q99584 98 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 GSX2Q9BZM3 304 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 POFUT1Q9H488 388 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 MSL2Q9HCI7 577 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 ZNF701Q9NV72 531 aaPredicted RBP9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 STUB1Q9UNE7 303 aa9.39□□□□□ -0.91
SMNDC1-203ENST00000460483 SPTBN1Q01082 2364 aaKnown RBP9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 TRDV1A0A1B0GX56 115 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 LRP5LA4QPB2 252 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 NDUFS8O00217 210 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 TMEM127O75204 238 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 GPX5O75715 221 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 INMTO95050 263 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 CD8AP01732 235 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 IGHV1-46P01743 117 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 ALDOBP05062 364 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 HCKP08631 526 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 ACKR3P25106 362 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 TGFBR2P37173 567 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 GATA4P43694 442 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 CAPZA1P52907 286 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 ATP5J2P56134 94 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 ALKBH6Q3KRA9 238 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 GLT8D1Q68CQ7 371 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 TMEM42Q69YG0 159 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 CDH24Q86UP0 819 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 TMEM203Q969S6 136 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 LURAP1Q96LR2 239 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 KCTD7Q96MP8 289 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 OR2V2Q96R30 315 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 RHOFQ9HBH0 211 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 SNTG1Q9NSN8 517 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 PPP1R3CQ9UQK1 317 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 SIRT4Q9Y6E7 314 aaPredicted RBP9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 TENM4Q6N022 2769 aa9.38□□□□□ -0.91
SMNDC1-203ENST00000460483 IGHV1-69-2A0A0G2JMI3 117 aa9.37□□□□□ -0.91
SMNDC1-203ENST00000460483 A0A1W2PPR1 153 aa9.37□□□□□ -0.91
SMNDC1-203ENST00000460483 ZSCAN5BA6NJL1 495 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms