RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 STRAPQ9Y3F4 350 aaKnown RBP13.18□□□□□ -0.3
PTPRU-205ENST00000460170 SIRPB1O00241 398 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 FOXS1O43638 330 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 GP1BAP07359 652 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 INSM1Q01101 510 aaPredicted RBP13.18□□□□□ -0.3
PTPRU-205ENST00000460170 PPP1R1AQ13522 171 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 TECTBQ96PL2 329 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 CNTD2Q9H8S5 307 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 UFSP2Q9NUQ7 469 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 AK3Q9UIJ7 227 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 SCN4AP35499 1836 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 IGHV3-64DA0A0J9YX35 117 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 TOX3O15405 576 aaPredicted RBP13.18□□□□□ -0.3
PTPRU-205ENST00000460170 FZD5Q13467 585 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 HLXQ14774 488 aaPredicted RBP13.18□□□□□ -0.3
PTPRU-205ENST00000460170 ZNF321PQ8N8H1 164 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 C20orf24Q9BUV8 137 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 CHST6Q9GZX3 395 aa13.18□□□□□ -0.3
PTPRU-205ENST00000460170 DSPPQ9NZW4 1301 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 LINC01387J3KSC0 135 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 ACSM4P0C7M7 580 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 ARSJQ5FYB0 599 aaPredicted RBP13.17□□□□□ -0.3
PTPRU-205ENST00000460170 LAIR2Q6ISS4 152 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 H2BFWTQ7Z2G1 175 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 TM4SF19Q96DZ7 209 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 AP1S3Q96PC3 154 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 UHRF2Q96PU4 802 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 DTX4Q9Y2E6 619 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 ZNF724A8MTY0 619 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 ZNF705FA8MVS1 300 aaPredicted RBP13.17□□□□□ -0.3
PTPRU-205ENST00000460170 SSSCA1O60232 199 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 ZNF705DP0CH99 300 aaPredicted RBP13.17□□□□□ -0.3
PTPRU-205ENST00000460170 ZNF705BP0CI00 300 aaPredicted RBP13.17□□□□□ -0.3
PTPRU-205ENST00000460170 FUT3P21217 361 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 FUT5Q11128 374 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 ADAM5Q6NVV9 412 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 GFOD1Q9NXC2 390 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 PCDHB10Q9UN67 800 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 MTCH2Q9Y6C9 303 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 TRILQ7L0X0 811 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 FAM185AQ8N0U4 392 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 D2HGDHQ8N465 521 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 ZBTB44Q8NCP5 570 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 PPP1R3CQ9UQK1 317 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 PSMB3P49720 205 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 OR8B8Q15620 311 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 SFTPA2Q8IWL1 248 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 DEFB123Q8N688 67 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 APOBEC3DQ96AK3 386 aaPredicted RBP13.17□□□□□ -0.3
PTPRU-205ENST00000460170 DHRS9Q9BPW9 319 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 SUCNR1Q9BXA5 334 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 PPP1R3EQ9H7J1 279 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 C19orf12Q9NSK7 152 aa13.17□□□□□ -0.3
PTPRU-205ENST00000460170 NHLRC1Q6VVB1 395 aa13.16□□□□□ -0.3
PTPRU-205ENST00000460170 ADGRG3Q86Y34 549 aa13.16□□□□□ -0.3
PTPRU-205ENST00000460170 NANPQ8TBE9 248 aa13.16□□□□□ -0.3
PTPRU-205ENST00000460170 ASB10Q8WXI3 467 aa13.16□□□□□ -0.3
PTPRU-205ENST00000460170 WFDC6Q9BQY6 131 aa13.16□□□□□ -0.3
PTPRU-205ENST00000460170 ARV1Q9H2C2 271 aa13.16□□□□□ -0.3
PTPRU-205ENST00000460170 ARRDC1-AS1Q9H2J1 176 aa13.16□□□□□ -0.3
PTPRU-205ENST00000460170 UCK1Q9HA47 277 aa13.16□□□□□ -0.3
PTPRU-205ENST00000460170 CD37P11049 281 aa13.16□□□□□ -0.3
PTPRU-205ENST00000460170 TAAR9Q96RI9 348 aa13.16□□□□□ -0.3
PTPRU-205ENST00000460170 ZNF391Q9UJN7 358 aa13.16□□□□□ -0.3
PTPRU-205ENST00000460170 SIRT4Q9Y6E7 314 aaPredicted RBP13.16□□□□□ -0.3
PTPRU-205ENST00000460170 TNFSF15O95150 251 aa13.16□□□□□ -0.3
PTPRU-205ENST00000460170 CPN1P15169 458 aa13.16□□□□□ -0.3
PTPRU-205ENST00000460170 SARAFQ96BY9 339 aa13.16□□□□□ -0.3
PTPRU-205ENST00000460170 TPPPO94811 219 aa13.16□□□□□ -0.3
PTPRU-205ENST00000460170 FAM157BP0CG42 384 aa13.16□□□□□ -0.3
PTPRU-205ENST00000460170 ELLP55199 621 aaPredicted RBP13.16□□□□□ -0.3
PTPRU-205ENST00000460170 RAC1P63000 192 aa13.16□□□□□ -0.3
PTPRU-205ENST00000460170 OR6X1Q8NH79 312 aa13.16□□□□□ -0.3
PTPRU-205ENST00000460170 P4HTMQ9NXG6 502 aa13.16□□□□□ -0.3
PTPRU-205ENST00000460170 TCRBV16S1A1N1A0A5B0 115 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 OIP5O43482 229 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 CXCL3P19876 107 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 DHODHQ02127 395 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 ZNF485Q8NCK3 441 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 ANGPTL6Q8NI99 470 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 KCNIP2Q9NS61 270 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 SPAG17Q6Q759 2223 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 CCDC88CQ9P219 2028 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 UMAD1C9J7I0 102 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 RGS13O14921 159 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 IGHV4-34P06331 123 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 PLA1AQ53H76 456 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 SPANXN5Q5MJ07 72 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 RPUSD3Q6P087 351 aaKnown RBP13.15□□□□□ -0.3
PTPRU-205ENST00000460170 MAP6Q96JE9 813 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 FAM173AQ9BQD7 235 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 KCNK15Q9H427 330 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 PMS2P1A4D2B8 440 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 TFF2Q03403 129 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 ADIRFQ15847 76 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 EXTL1Q92935 676 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 MAGT1Q9H0U3 335 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 ST6GALNAC2Q9UJ37 374 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 PILRAQ9UKJ1 303 aa13.15□□□□□ -0.3
PTPRU-205ENST00000460170 PIKFYVEQ9Y2I7 2098 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms